| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342396
Identifier: 146342396
GI number: 146342396
Start: 5738798
End: 5740558
Strand: Reverse
Name: 146342396
Synonym: BRADO5553
Alternate gene names: NA
Gene position: 5740558-5738798 (Counterclockwise)
Preceding gene: 146342397
Following gene: 146342395
Centisome position: 76.99
GC content: 65.02
Gene sequence:
>1761_bases TTGATCAGCCGGCATGCGCCGGCGAAGGACGCTTGCCTGATCGACCGCCTGATGTCTCTGACCCCGAACCACGAACCGAT CACGACGCTCACGGCGGCGAGCGCGACACGTTCGACCATTGTGCGGCTCTCGGCCGTCGCCGCGCCGCATGTGGCCGCGC TGGCGCTGATGCTGCACACCGAGACCGATTTCGGCTCGCGGCTCGGCTTCCTGCTGGCGTGGGGCATCCTGAACGGGTTC TGGCTGGTGATGTTGCGGCGGCCGGCGGTGTCGGGCGCGCTGGCCCTGACCATGGTCGTGGTGCTGGTGCTGCTGTCGCA GCTGAAGCATGCCGTGGTCCAGATGACGGCGAACTTCGTCGACGTGATGCTGATCGACCATGACAGCGCAGCCTTCCTGT TCACGATCTTCCCGAACCTGAAGCTGTCAGTGCTCGTTGCGGCGGTGGTCGTCGTGCCGCTGATGGGGCTGTTGTGGTGG GTCGATCCGTTTCGCGTCGCGCGCCTGCCGGCGCTGGCCGGCAAGCTCGCGTGCCTCGCGGCGCTGACGCTGTATTCGCT CAACTGGCGCGACGAGGCGTGGCGCGGCTATTATGACGACGGCTATCTCTCGAAATTCGCGCGCTCCGGCGTGACCGCCG TATCGGATTTTCTCGCCAACGGCTTCATGGAGTCCGATGCGACAGCCGACCGCAGGCTGGCCGCTTTCGTACCGGATTCC TGTCATCCCGCCGGGCGGCGCCCGAACATCGTGCTGATCCACGACGAATCCAGCTTCGACATTCGCTCCGCGCCGGGCAT CAAGGTGCCCCAGGGCTATGGCAGCCACTTCAAGTCCTATGACGGCAAGGCGCGGCAGTTCATGGCCGAGAGCAATGGCG GGCCGAGCTGGTTCACCGAGTACAACGTACTCGCCGGCCTATCGTCGCGCTCGTTCGGCCGTTTCGCCTATTTCGTGACG CGCATCGCCTCCGGCCGCGTCGAGCGCGGCCTGCCGCTGGCGCTGCGCAATTGCGGCTACGACACTTTGTCGCTGTATCC CGCGCATGGCGCCTTCATGAGCGCGCGCAGCTTCCAGACCACCGTCGGGGTCGACCGCTTCCTCGACGCGCGCGATCTCG GCGCCAAGGGTGTCGAGCCTGACGGCTTCTTCTACGATGCCGCGCTCGACCTGATGCAGCAGCGCAAGCCGGGCAAGCCG CTTTTCATGTTCGTCTATCTTGCCGCCAATCATTTTCCTTGGGAAACGACGTTCCGTCCCGAACTGACGCCGTCCTGGCG CGCGCCTGGCAATCTGCCCGCGATCGATGAATATCTGCGCCGGCAGGCGATGAGCGCATCGGACTATCAGCGCTTCCTGG CGAGCCTGAAGAAGCGGTTCGGCGACCAGCCGTTCCTGATCGTGCGCTATGGCGACCACCAGCCGGAATTCTCGCCGCAC ATCCTCGACCCCAAGCTCGACGAGGCCGGCATCGGCGAGAAGCTCGAGAGCTACGATCCGCGCTATTATCAGACCTATTA CGCGATCGATGCCGTCAATTTCGAGCCGCGCCAGAGCAGCGTCGTGATGGACAGGATCGATGCCGCCTATCTGCCGCTGG TCACACTCGAGGCCGCCGGCATTCCGCTCGATCCGTCCTTCGCCGAGCAGAAGGACATCATGCAGCGCTGCAAGGGCGTG TTCTACGCCTGCGGCGACGGCGCCGAAGCGCGCCGCTTCAATCGCATGCTGATCGACGCCGAGCTGATCCGCGGACTGTG A
Upstream 100 bases:
>100_bases TCGCTGCTGCGACGCGACAACGGCGCGGCATTCCGGGCAAATCCGGACTGTTGTTATTTGTGACGATTTCATTACGGTCA CATGACAGGATCAGGCGTCC
Downstream 100 bases:
>100_bases GCCGCCTCACGCTCACGGCATTGCGACGATCGTTCCTCGGCTCGGAGCATTGCGGCGACGACCGCGCTGGGCTACCGATG CGCTCCGTGCAATCGGAGGT
Product: putative sulfatase family protein
Products: NA
Alternate protein names: Phosphoglycerol Transferase; Sulfatase Family Protein
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MISRHAPAKDACLIDRLMSLTPNHEPITTLTAASATRSTIVRLSAVAAPHVAALALMLHTETDFGSRLGFLLAWGILNGF WLVMLRRPAVSGALALTMVVVLVLLSQLKHAVVQMTANFVDVMLIDHDSAAFLFTIFPNLKLSVLVAAVVVVPLMGLLWW VDPFRVARLPALAGKLACLAALTLYSLNWRDEAWRGYYDDGYLSKFARSGVTAVSDFLANGFMESDATADRRLAAFVPDS CHPAGRRPNIVLIHDESSFDIRSAPGIKVPQGYGSHFKSYDGKARQFMAESNGGPSWFTEYNVLAGLSSRSFGRFAYFVT RIASGRVERGLPLALRNCGYDTLSLYPAHGAFMSARSFQTTVGVDRFLDARDLGAKGVEPDGFFYDAALDLMQQRKPGKP LFMFVYLAANHFPWETTFRPELTPSWRAPGNLPAIDEYLRRQAMSASDYQRFLASLKKRFGDQPFLIVRYGDHQPEFSPH ILDPKLDEAGIGEKLESYDPRYYQTYYAIDAVNFEPRQSSVVMDRIDAAYLPLVTLEAAGIPLDPSFAEQKDIMQRCKGV FYACGDGAEARRFNRMLIDAELIRGL
Sequences:
>Translated_586_residues MISRHAPAKDACLIDRLMSLTPNHEPITTLTAASATRSTIVRLSAVAAPHVAALALMLHTETDFGSRLGFLLAWGILNGF WLVMLRRPAVSGALALTMVVVLVLLSQLKHAVVQMTANFVDVMLIDHDSAAFLFTIFPNLKLSVLVAAVVVVPLMGLLWW VDPFRVARLPALAGKLACLAALTLYSLNWRDEAWRGYYDDGYLSKFARSGVTAVSDFLANGFMESDATADRRLAAFVPDS CHPAGRRPNIVLIHDESSFDIRSAPGIKVPQGYGSHFKSYDGKARQFMAESNGGPSWFTEYNVLAGLSSRSFGRFAYFVT RIASGRVERGLPLALRNCGYDTLSLYPAHGAFMSARSFQTTVGVDRFLDARDLGAKGVEPDGFFYDAALDLMQQRKPGKP LFMFVYLAANHFPWETTFRPELTPSWRAPGNLPAIDEYLRRQAMSASDYQRFLASLKKRFGDQPFLIVRYGDHQPEFSPH ILDPKLDEAGIGEKLESYDPRYYQTYYAIDAVNFEPRQSSVVMDRIDAAYLPLVTLEAAGIPLDPSFAEQKDIMQRCKGV FYACGDGAEARRFNRMLIDAELIRGL >Mature_586_residues MISRHAPAKDACLIDRLMSLTPNHEPITTLTAASATRSTIVRLSAVAAPHVAALALMLHTETDFGSRLGFLLAWGILNGF WLVMLRRPAVSGALALTMVVVLVLLSQLKHAVVQMTANFVDVMLIDHDSAAFLFTIFPNLKLSVLVAAVVVVPLMGLLWW VDPFRVARLPALAGKLACLAALTLYSLNWRDEAWRGYYDDGYLSKFARSGVTAVSDFLANGFMESDATADRRLAAFVPDS CHPAGRRPNIVLIHDESSFDIRSAPGIKVPQGYGSHFKSYDGKARQFMAESNGGPSWFTEYNVLAGLSSRSFGRFAYFVT RIASGRVERGLPLALRNCGYDTLSLYPAHGAFMSARSFQTTVGVDRFLDARDLGAKGVEPDGFFYDAALDLMQQRKPGKP LFMFVYLAANHFPWETTFRPELTPSWRAPGNLPAIDEYLRRQAMSASDYQRFLASLKKRFGDQPFLIVRYGDHQPEFSPH ILDPKLDEAGIGEKLESYDPRYYQTYYAIDAVNFEPRQSSVVMDRIDAAYLPLVTLEAAGIPLDPSFAEQKDIMQRCKGV FYACGDGAEARRFNRMLIDAELIRGL
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65090; Mature: 65090
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRHAPAKDACLIDRLMSLTPNHEPITTLTAASATRSTIVRLSAVAAPHVAALALMLHT CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETDFGSRLGFLLAWGILNGFWLVMLRRPAVSGALALTMVVVLVLLSQLKHAVVQMTANFV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE DVMLIDHDSAAFLFTIFPNLKLSVLVAAVVVVPLMGLLWWVDPFRVARLPALAGKLACLA EEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALTLYSLNWRDEAWRGYYDDGYLSKFARSGVTAVSDFLANGFMESDATADRRLAAFVPDS HHHHHHCCCCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHCEEEEECCCC CHPAGRRPNIVLIHDESSFDIRSAPGIKVPQGYGSHFKSYDGKARQFMAESNGGPSWFTE CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCHHHH YNVLAGLSSRSFGRFAYFVTRIASGRVERGLPLALRNCGYDTLSLYPAHGAFMSARSFQT HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEECCCCHHHHHCCHHH TVGVDRFLDARDLGAKGVEPDGFFYDAALDLMQQRKPGKPLFMFVYLAANHFPWETTFRP HHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC ELTPSWRAPGNLPAIDEYLRRQAMSASDYQRFLASLKKRFGDQPFLIVRYGDHQPEFSPH CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC ILDPKLDEAGIGEKLESYDPRYYQTYYAIDAVNFEPRQSSVVMDRIDAAYLPLVTLEAAG CCCCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEECCC IPLDPSFAEQKDIMQRCKGVFYACGDGAEARRFNRMLIDAELIRGL CCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MISRHAPAKDACLIDRLMSLTPNHEPITTLTAASATRSTIVRLSAVAAPHVAALALMLHT CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETDFGSRLGFLLAWGILNGFWLVMLRRPAVSGALALTMVVVLVLLSQLKHAVVQMTANFV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE DVMLIDHDSAAFLFTIFPNLKLSVLVAAVVVVPLMGLLWWVDPFRVARLPALAGKLACLA EEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALTLYSLNWRDEAWRGYYDDGYLSKFARSGVTAVSDFLANGFMESDATADRRLAAFVPDS HHHHHHCCCCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHCEEEEECCCC CHPAGRRPNIVLIHDESSFDIRSAPGIKVPQGYGSHFKSYDGKARQFMAESNGGPSWFTE CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCHHHH YNVLAGLSSRSFGRFAYFVTRIASGRVERGLPLALRNCGYDTLSLYPAHGAFMSARSFQT HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEECCCCHHHHHCCHHH TVGVDRFLDARDLGAKGVEPDGFFYDAALDLMQQRKPGKPLFMFVYLAANHFPWETTFRP HHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC ELTPSWRAPGNLPAIDEYLRRQAMSASDYQRFLASLKKRFGDQPFLIVRYGDHQPEFSPH CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC ILDPKLDEAGIGEKLESYDPRYYQTYYAIDAVNFEPRQSSVVMDRIDAAYLPLVTLEAAG CCCCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEECCC IPLDPSFAEQKDIMQRCKGVFYACGDGAEARRFNRMLIDAELIRGL CCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA