| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ssuC [H]
Identifier: 146342391
GI number: 146342391
Start: 5733716
End: 5734501
Strand: Reverse
Name: ssuC [H]
Synonym: BRADO5548
Alternate gene names: 146342391
Gene position: 5734501-5733716 (Counterclockwise)
Preceding gene: 146342392
Following gene: 146342390
Centisome position: 76.91
GC content: 65.65
Gene sequence:
>786_bases ATGTCGCGCCTCGGTCTGCTCGCGCTGCAGCTGCTGGTCGCGATCGTCGCGATCGCGCTGTGGCAGTTGTTGTCCAACGT CCCGGTGTTCGGCCGCATCTGGCTGCCGCCGTTCTTCTTCTCCAACCCGGTCGACGTAGCGGCGCAAGTCGTGAAATGGT TCGCGACCGGCGCGATCTGGAAGCATCTGGCGATCACGCTGTGGGAGTCGATCCTGGCGTTCGCCATCGGCTCGCTCGGC GGTGTGCTGGTCGGCTTCTGGTTCGCGCGCAAGCCGCTGGTCGCTGCCGTGTTCGACCCCTACGTCAAGATGGCCAACGC GCTGCCACGTGTGGTGCTGGCGCCGATCTTCACGCTGTGGCTCGGCCTGGGGATCTGGTCCAAGGTCGCGCTCGGCGTCA CGCTCGTCTTCTTCATCGTGTTCTTCAACGTCTATCAGGGCGTCAAGGAGGTCTCGACCGTCGTGCGCGACAACGCGCGC ATGCTCGGCATGAGCGAGCGCCAGCTGATGCGCCACGTCTATTGGCCGTCGGCGTTGTCCTGGATGTTCTCGTCGCTGCA CACTTCGGTCGGCTTCGCGGTAGTGGGAGCCGTCGTCGGCGAGTATCTCGGCTCGGCCGCCGGCCTCGGCTATCTCATTC AGCAGGCCGAAGGCGTGTTCGACGTCGCCGGCGTCTTCGCCGGCATGTTCGTGCTGTCGGCCTTCGTCATCCTGATCGAC ATCTGCGTGACGCTAGTAGAGCGGCGGCTCCTGGTGTGGCGGCCGGACGCGGCGGATGGCCGGTGA
Upstream 100 bases:
>100_bases GTGTGGACCCCCCACCCCGACCCTCCCCCGCAAGGGGGGAGGGAGTGCACCACCTGCGCGGCATGGACATCGCGTTCCCC TTGCAGCGGGGAGCAGCCTG
Downstream 100 bases:
>100_bases GGGTGGCGCCGTCGCTCCGCATTCCGCCGTCGTCCCGGCGAAAGCCGGGGCCCATAACCACAGGGAGTGGTTTGGGGCAG GCGGGACGACCGATCATTTC
Product: ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSRLGLLALQLLVAIVAIALWQLLSNVPVFGRIWLPPFFFSNPVDVAAQVVKWFATGAIWKHLAITLWESILAFAIGSLG GVLVGFWFARKPLVAAVFDPYVKMANALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFIVFFNVYQGVKEVSTVVRDNAR MLGMSERQLMRHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLGSAAGLGYLIQQAEGVFDVAGVFAGMFVLSAFVILID ICVTLVERRLLVWRPDAADGR
Sequences:
>Translated_261_residues MSRLGLLALQLLVAIVAIALWQLLSNVPVFGRIWLPPFFFSNPVDVAAQVVKWFATGAIWKHLAITLWESILAFAIGSLG GVLVGFWFARKPLVAAVFDPYVKMANALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFIVFFNVYQGVKEVSTVVRDNAR MLGMSERQLMRHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLGSAAGLGYLIQQAEGVFDVAGVFAGMFVLSAFVILID ICVTLVERRLLVWRPDAADGR >Mature_260_residues SRLGLLALQLLVAIVAIALWQLLSNVPVFGRIWLPPFFFSNPVDVAAQVVKWFATGAIWKHLAITLWESILAFAIGSLGG VLVGFWFARKPLVAAVFDPYVKMANALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFIVFFNVYQGVKEVSTVVRDNARM LGMSERQLMRHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLGSAAGLGYLIQQAEGVFDVAGVFAGMFVLSAFVILIDI CVTLVERRLLVWRPDAADGR
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=223, Percent_Identity=27.8026905829596, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87081802, Length=238, Percent_Identity=26.4705882352941, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28634; Mature: 28503
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLGLLALQLLVAIVAIALWQLLSNVPVFGRIWLPPFFFSNPVDVAAQVVKWFATGAIW CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCHHHHHHHHHHHHHHHHHH KHLAITLWESILAFAIGSLGGVLVGFWFARKPLVAAVFDPYVKMANALPRVVLAPIFTLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGIWSKVALGVTLVFFIVFFNVYQGVKEVSTVVRDNARMLGMSERQLMRHVYWPSALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH WMFSSLHTSVGFAVVGAVVGEYLGSAAGLGYLIQQAEGVFDVAGVFAGMFVLSAFVILID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ICVTLVERRLLVWRPDAADGR HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SRLGLLALQLLVAIVAIALWQLLSNVPVFGRIWLPPFFFSNPVDVAAQVVKWFATGAIW CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCHHHHHHHHHHHHHHHHHH KHLAITLWESILAFAIGSLGGVLVGFWFARKPLVAAVFDPYVKMANALPRVVLAPIFTLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGIWSKVALGVTLVFFIVFFNVYQGVKEVSTVVRDNARMLGMSERQLMRHVYWPSALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH WMFSSLHTSVGFAVVGAVVGEYLGSAAGLGYLIQQAEGVFDVAGVFAGMFVLSAFVILID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ICVTLVERRLLVWRPDAADGR HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]