| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342308
Identifier: 146342308
GI number: 146342308
Start: 5649324
End: 5650217
Strand: Direct
Name: 146342308
Synonym: BRADO5463
Alternate gene names: NA
Gene position: 5649324-5650217 (Clockwise)
Preceding gene: 146342307
Following gene: 146342309
Centisome position: 75.76
GC content: 64.21
Gene sequence:
>894_bases GTGTCCAACGAAAAAGGCAACACCGTATCCGTCATCGACACCGACAGCTGGACGGTGACAAAAACCATCAAGGTCGGCCA GCGCCCGCGCGGCATCGCGTTCACGCGCGATGGCAAATTCGTGATGGTGGCGGTCGGCGACGACGACACCATCCAGCTCA TCGACGCGAAAAAGATGGAGATCGTCGACACCCTGCCCTCCGGCCCGGATCCCGAGCTGTTCGCGCAGGACACCGCCGGC AAGACGCTCTACGTCGCCAACGAGAACGACAACACCGTCACCGTGCTCGATCTCGAGAAGCGCGTGCGGATCGGCGACGT CCAGGTCGGCGTCGAGCCCGAAGGCATGATGCTCAGCCCGGACGGCAAGATCCTGATCTGCACCTCCGAGACCACCAACA TGGCGCATTTCATCGACACGGCCACGCGCAAGATCGTGGCCAACGTGCTGGTCGATGCGCGGCCGCGCTATGCCGAGTTC AAGACCGACGGCTCGGAGCTGTGGGTCTCCGCCGAGATCGGCGGCACGGTGTCGATCATCGACCCCGCCAAGCGCGAGGT GACCGGCAAGATCAAGTTCGCCGTGCCGGGCCTGCGCAGCGAGGCGATCCAGCCGGTCGGCATCAGCCTGACCAAGGACG GCAAGACCGGCTTCGTCGCGCTCGGCCCGGCCAACCGCGTCGCGGTCGTCGACGGCACCACGCATGAGGTGAAGAAGTAT CTCCTCGTCGGCCAGCGCGTCTGGCACATGGAGTTCACGCCCGACGAAAAGTATCTGCTCGTCACCAACGGCGTCTCCAA CGATGTCTCGGTGATCGACGTCGCCGCGCAGAAGGTGATCAAGACCATCCAGGTCGGCGAGCTGCCCTGGGGCATCACGA TTGCACAGCCATGA
Upstream 100 bases:
>100_bases ACGGCCGCAAGTTCGAAAGCGCTTCAACGCAGCAGCCTGCCTGCTCGCGGCCGCACTCTCCCTCGCCGCGATCTCCCCCG CCTCAGCCTACGTCGCCTTC
Downstream 100 bases:
>100_bases TGACGAAGAACGCCCCCGCTCTCGACTCCACGAACCTAGCGCCGCAGCCGGCGTCTGATCAGGTGCCGGCCCTGTCGGTC GCCGGCGTCAGCCATTCCTA
Product: putative quinoprotein amine dehydrogenase subunit beta-like
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Surface Layer Protein; Cell Surface Protein; YVTN Family Beta-Propeller Repeat Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Vegetative Incompatibility; Beta-Propeller Fold Protein; Surface Antigen; Triple Helix Repeat-Containing Collagen; Yvtn Beta-Propeller Repeat Family Protein; WD40 Domain-Containing Protein; Outer Membrane Protein; Glycine-Rich Cell Wall Protein; YVTN Beta-Propeller Repeat Family Protein; IPT/TIG Domain Protein; Signal Peptide; Beta-Propeller Repeat Protein YVTN Family; LOW QUALITY PROTEIN Surface Antigen Protein; Surface Antigen-Like Protein; Alkaline Serine Protease; WD-40 Repeat-Containing Protein; Serine/Threonine Protein Kinase; Signal Peptide Protein; YVTN Family Beta-Propeller Repeat-Containing Protein; Alpha-1 2-Mannosidase; SGL Domain-Containing Protein; Secreted Protein; YVTN Family Beta-Propeller Repeat Family Protein
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSNEKGNTVSVIDTDSWTVTKTIKVGQRPRGIAFTRDGKFVMVAVGDDDTIQLIDAKKMEIVDTLPSGPDPELFAQDTAG KTLYVANENDNTVTVLDLEKRVRIGDVQVGVEPEGMMLSPDGKILICTSETTNMAHFIDTATRKIVANVLVDARPRYAEF KTDGSELWVSAEIGGTVSIIDPAKREVTGKIKFAVPGLRSEAIQPVGISLTKDGKTGFVALGPANRVAVVDGTTHEVKKY LLVGQRVWHMEFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIAQP
Sequences:
>Translated_297_residues MSNEKGNTVSVIDTDSWTVTKTIKVGQRPRGIAFTRDGKFVMVAVGDDDTIQLIDAKKMEIVDTLPSGPDPELFAQDTAG KTLYVANENDNTVTVLDLEKRVRIGDVQVGVEPEGMMLSPDGKILICTSETTNMAHFIDTATRKIVANVLVDARPRYAEF KTDGSELWVSAEIGGTVSIIDPAKREVTGKIKFAVPGLRSEAIQPVGISLTKDGKTGFVALGPANRVAVVDGTTHEVKKY LLVGQRVWHMEFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIAQP >Mature_296_residues SNEKGNTVSVIDTDSWTVTKTIKVGQRPRGIAFTRDGKFVMVAVGDDDTIQLIDAKKMEIVDTLPSGPDPELFAQDTAGK TLYVANENDNTVTVLDLEKRVRIGDVQVGVEPEGMMLSPDGKILICTSETTNMAHFIDTATRKIVANVLVDARPRYAEFK TDGSELWVSAEIGGTVSIIDPAKREVTGKIKFAVPGLRSEAIQPVGISLTKDGKTGFVALGPANRVAVVDGTTHEVKKYL LVGQRVWHMEFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIAQP
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32164; Mature: 32033
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEKGNTVSVIDTDSWTVTKTIKVGQRPRGIAFTRDGKFVMVAVGDDDTIQLIDAKKME CCCCCCCEEEEEECCCEEEEEEEEECCCCCCEEEEECCCEEEEEECCCCEEEEEECCCEE IVDTLPSGPDPELFAQDTAGKTLYVANENDNTVTVLDLEKRVRIGDVQVGVEPEGMMLSP EEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCEEECEEEECCCCCCEEECC DGKILICTSETTNMAHFIDTATRKIVANVLVDARPRYAEFKTDGSELWVSAEIGGTVSII CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEEE DPAKREVTGKIKFAVPGLRSEAIQPVGISLTKDGKTGFVALGPANRVAVVDGTTHEVKKY CCCCCCEEEEEEEEECCCHHHCCCCCEEEEEECCCCCEEEECCCCEEEEEECCHHHHHHH LLVGQRVWHMEFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIAQP HHCCCEEEEEEECCCCCEEEEECCCCCCCEEEHHHHHHHHHHHEECCCCCEEEECCC >Mature Secondary Structure SNEKGNTVSVIDTDSWTVTKTIKVGQRPRGIAFTRDGKFVMVAVGDDDTIQLIDAKKME CCCCCCEEEEEECCCEEEEEEEEECCCCCCEEEEECCCEEEEEECCCCEEEEEECCCEE IVDTLPSGPDPELFAQDTAGKTLYVANENDNTVTVLDLEKRVRIGDVQVGVEPEGMMLSP EEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCEEECEEEECCCCCCEEECC DGKILICTSETTNMAHFIDTATRKIVANVLVDARPRYAEFKTDGSELWVSAEIGGTVSII CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEEE DPAKREVTGKIKFAVPGLRSEAIQPVGISLTKDGKTGFVALGPANRVAVVDGTTHEVKKY CCCCCCEEEEEEEEECCCHHHCCCCCEEEEEECCCCCEEEECCCCEEEEEECCHHHHHHH LLVGQRVWHMEFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIAQP HHCCCEEEEEEECCCCCEEEEECCCCCCCEEEHHHHHHHHHHHEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA