Click here to switch to the map view.

The map label for this gene is yjbI [H]

Identifier: 146342252

GI number: 146342252

Start: 5604832

End: 5605290

Strand: Reverse

Name: yjbI [H]

Synonym: BRADO5406

Alternate gene names: 146342252

Gene position: 5605290-5604832 (Counterclockwise)

Preceding gene: 146342253

Following gene: 146342246

Centisome position: 75.17

GC content: 67.32

Gene sequence:

>459_bases
ATGGCGGACGCAGGCACGACTGAGACTGACACATCTGCGACAGGGCCGGTGATCACGCCCTATGAGCGGATCGGCGGTGC
CGCCGTGATCGATCGCCTGGTCGAGTCGTTCTACCACCGCATGGATACGCTGCCCGAGGCCAAGACGATCCGCGACATGC
ACGGCACGAACCTCGGACCGATCAAGGTCGTGCTGAAGCGCTATCTCTCGGAATGGCTCGGCGGCCCGAAACTGTACTCG
CCCGAGAAGGGCCATCCGCGGCTGCGCCAGCGCCACATGGGATTTCCGATCGGCAACGCCGAGCGCGACGCCTGGCTGCT
GTGCATGCGCGGCGCACTCGATGAGACGGTGGCGGATGTGGCGGCCCGGCAGGACGTCGACGCCGCGATGACCAAGCTCG
CCGACTGGATGCGCAACCAGGCCGGCAATCCGCATGACGCGCGGGCTGCGCCGCCGTGA

Upstream 100 bases:

>100_bases
CGGGTCGATACGCTGGAGCTCGTGGCCGAGCAGGGGCCCGGCGCACCGGCCGAGGTGATCCTGCAGCCGAGCTTGGACGA
ATAGAGACGGGACTGGTTGG

Downstream 100 bases:

>100_bases
GTTCGGGTCACCGTCTCAGTCGTCATTGCAAGGAATCGAAGGCGACGAAGCGATCCAGAGTGCGGGACTCTGGATCGCCT
AGCTACGCCGCTGTGCTTGC

Product: putative hemoglobin protein (truncated hemoglobin)

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MADAGTTETDTSATGPVITPYERIGGAAVIDRLVESFYHRMDTLPEAKTIRDMHGTNLGPIKVVLKRYLSEWLGGPKLYS
PEKGHPRLRQRHMGFPIGNAERDAWLLCMRGALDETVADVAARQDVDAAMTKLADWMRNQAGNPHDARAAPP

Sequences:

>Translated_152_residues
MADAGTTETDTSATGPVITPYERIGGAAVIDRLVESFYHRMDTLPEAKTIRDMHGTNLGPIKVVLKRYLSEWLGGPKLYS
PEKGHPRLRQRHMGFPIGNAERDAWLLCMRGALDETVADVAARQDVDAAMTKLADWMRNQAGNPHDARAAPP
>Mature_151_residues
ADAGTTETDTSATGPVITPYERIGGAAVIDRLVESFYHRMDTLPEAKTIRDMHGTNLGPIKVVLKRYLSEWLGGPKLYSP
EKGHPRLRQRHMGFPIGNAERDAWLLCMRGALDETVADVAARQDVDAAMTKLADWMRNQAGNPHDARAAPP

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 16736; Mature: 16605

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADAGTTETDTSATGPVITPYERIGGAAVIDRLVESFYHRMDTLPEAKTIRDMHGTNLGP
CCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH
IKVVLKRYLSEWLGGPKLYSPEKGHPRLRQRHMGFPIGNAERDAWLLCMRGALDETVADV
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AARQDVDAAMTKLADWMRNQAGNPHDARAAPP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ADAGTTETDTSATGPVITPYERIGGAAVIDRLVESFYHRMDTLPEAKTIRDMHGTNLGP
CCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH
IKVVLKRYLSEWLGGPKLYSPEKGHPRLRQRHMGFPIGNAERDAWLLCMRGALDETVADV
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AARQDVDAAMTKLADWMRNQAGNPHDARAAPP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]