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The map label for this gene is ydhD [C]

Identifier: 146342245

GI number: 146342245

Start: 5599924

End: 5600253

Strand: Reverse

Name: ydhD [C]

Synonym: BRADO5399

Alternate gene names: 146342245

Gene position: 5600253-5599924 (Counterclockwise)

Preceding gene: 146342246

Following gene: 146342244

Centisome position: 75.1

GC content: 60.3

Gene sequence:

>330_bases
ATGTCGACATCCGAACGTATTCAGAAGCTGATCGACAGCAATGACATCGTTCTCTTCATGAAGGGCGTGCCGGCGGCGCC
GCAATGCGGCTTCTCCGCCGCCGTGGCGCAGATCCTGGCCAAGCTCGAGGTGCCGTATGAGAGCGTCAACGTGCTGGCCG
ATCCCTTCATTCGTGAGGGCATCAAGGAATTCTCCAACTGGCCGACTATTCCCCAGCTCTATGTGAAGGGCGAATTCGTC
GGCGGCTGCGACATCGTGCGCGAGATGTTCCAGGCCGGCGAGCTCGCGACGTTGCTGGCCGACAAGGGCATCAAGGCGTC
CGCATCATGA

Upstream 100 bases:

>100_bases
CAAGGGCCAGATGGGCGGCGTGCTGCATGCGCTGGCGCTCGAGACGTCATTGCCGAAATGATCGCTGCCGCGACACCTCC
AGGGACGAAAGGATAAAACA

Downstream 100 bases:

>100_bases
GTGATGGTGGTGTCGCGGAGGCGGAAGACGAGTTCGAGATTCCGCAGCTCTACAAATATCACGCCTTCGTCTGCCTGACG
CAGCGGCCGCCCGGCCATCC

Product: putative glutaredoxin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSTSERIQKLIDSNDIVLFMKGVPAAPQCGFSAAVAQILAKLEVPYESVNVLADPFIREGIKEFSNWPTIPQLYVKGEFV
GGCDIVREMFQAGELATLLADKGIKASAS

Sequences:

>Translated_109_residues
MSTSERIQKLIDSNDIVLFMKGVPAAPQCGFSAAVAQILAKLEVPYESVNVLADPFIREGIKEFSNWPTIPQLYVKGEFV
GGCDIVREMFQAGELATLLADKGIKASAS
>Mature_108_residues
STSERIQKLIDSNDIVLFMKGVPAAPQCGFSAAVAQILAKLEVPYESVNVLADPFIREGIKEFSNWPTIPQLYVKGEFVG
GCDIVREMFQAGELATLLADKGIKASAS

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=104, Percent_Identity=51.9230769230769, Blast_Score=117, Evalue=2e-27,
Organism=Homo sapiens, GI95113651, Length=95, Percent_Identity=48.4210526315789, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1787943, Length=106, Percent_Identity=50, Blast_Score=108, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17556042, Length=100, Percent_Identity=51, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71988153, Length=87, Percent_Identity=47.1264367816092, Blast_Score=99, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71988159, Length=85, Percent_Identity=44.7058823529412, Blast_Score=99, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6325198, Length=98, Percent_Identity=54.0816326530612, Blast_Score=110, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6320303, Length=83, Percent_Identity=45.7831325301205, Blast_Score=93, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=44.578313253012, Blast_Score=91, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24642023, Length=98, Percent_Identity=48.9795918367347, Blast_Score=115, Evalue=7e-27,
Organism=Drosophila melanogaster, GI19921242, Length=95, Percent_Identity=43.1578947368421, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11792; Mature: 11661

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSERIQKLIDSNDIVLFMKGVPAAPQCGFSAAVAQILAKLEVPYESVNVLADPFIREG
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IKEFSNWPTIPQLYVKGEFVGGCDIVREMFQAGELATLLADKGIKASAS
HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STSERIQKLIDSNDIVLFMKGVPAAPQCGFSAAVAQILAKLEVPYESVNVLADPFIREG
CHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IKEFSNWPTIPQLYVKGEFVGGCDIVREMFQAGELATLLADKGIKASAS
HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]