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The map label for this gene is fdx4 [H]

Identifier: 146342244

GI number: 146342244

Start: 5599565

End: 5599927

Strand: Reverse

Name: fdx4 [H]

Synonym: BRADO5398

Alternate gene names: 146342244

Gene position: 5599927-5599565 (Counterclockwise)

Preceding gene: 146342245

Following gene: 146342240

Centisome position: 75.1

GC content: 65.29

Gene sequence:

>363_bases
ATGAGTGATGGTGGTGTCGCGGAGGCGGAAGACGAGTTCGAGATTCCGCAGCTCTACAAATATCACGCCTTCGTCTGCCT
GACGCAGCGGCCGCCCGGCCATCCACGCGGCAGCTGCGGCGCGCTCGGCGTGCAGCCCTTGTGGGACCGGCTGACCAAGA
CCATCGAGGCGCAGCGGCTGACGGATGTCGGCGTCACCGCCGCCGGCTGCTTCGGCTTCTGCAGCGCCGGGCCGATGATG
GTGGTCTATCCCGACGGCATCTGGTATCGGCCGACCAAGCCGGAGGATATCGACGAGATCGTCGAATCCCACTTCAAGCA
GGGCAAGCGCGTCGACCGTCTGGTGATGGTGCTGAAGCGCTGA

Upstream 100 bases:

>100_bases
AGGGCGAATTCGTCGGCGGCTGCGACATCGTGCGCGAGATGTTCCAGGCCGGCGAGCTCGCGACGTTGCTGGCCGACAAG
GGCATCAAGGCGTCCGCATC

Downstream 100 bases:

>100_bases
AACCTGGACCGGAGCCGCTCAGCGCGGCTCCGGGCAGGGCGACGCTTCGGGCCGCGTGCAGCCCTGGACGTCGTCGAGAT
CATCCTCCCGCTGCAGCAGC

Product: ferredoxin, 2Fe-2S

Products: NA

Alternate protein names: AaFd4 [H]

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSDGGVAEAEDEFEIPQLYKYHAFVCLTQRPPGHPRGSCGALGVQPLWDRLTKTIEAQRLTDVGVTAAGCFGFCSAGPMM
VVYPDGIWYRPTKPEDIDEIVESHFKQGKRVDRLVMVLKR

Sequences:

>Translated_120_residues
MSDGGVAEAEDEFEIPQLYKYHAFVCLTQRPPGHPRGSCGALGVQPLWDRLTKTIEAQRLTDVGVTAAGCFGFCSAGPMM
VVYPDGIWYRPTKPEDIDEIVESHFKQGKRVDRLVMVLKR
>Mature_119_residues
SDGGVAEAEDEFEIPQLYKYHAFVCLTQRPPGHPRGSCGALGVQPLWDRLTKTIEAQRLTDVGVTAAGCFGFCSAGPMMV
VYPDGIWYRPTKPEDIDEIVESHFKQGKRVDRLVMVLKR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 13385; Mature: 13253

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGGVAEAEDEFEIPQLYKYHAFVCLTQRPPGHPRGSCGALGVQPLWDRLTKTIEAQRL
CCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TDVGVTAAGCFGFCSAGPMMVVYPDGIWYRPTKPEDIDEIVESHFKQGKRVDRLVMVLKR
HHCCCHHHHHHHHCCCCCEEEECCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
SDGGVAEAEDEFEIPQLYKYHAFVCLTQRPPGHPRGSCGALGVQPLWDRLTKTIEAQRL
CCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TDVGVTAAGCFGFCSAGPMMVVYPDGIWYRPTKPEDIDEIVESHFKQGKRVDRLVMVLKR
HHCCCHHHHHHHHCCCCCEEEECCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320; 10441520; 10884354; 12089152 [H]