| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is creB [C]
Identifier: 146342242
GI number: 146342242
Start: 5598727
End: 5599128
Strand: Direct
Name: creB [C]
Synonym: BRADO5396
Alternate gene names: 146342242
Gene position: 5598727-5599128 (Clockwise)
Preceding gene: 146342241
Following gene: 146342243
Centisome position: 75.08
GC content: 65.67
Gene sequence:
>402_bases GTGGACCAGCGGCGCGTGTTCGTGATCGATGACGACGAGATCACCCGCGCCGCCCTGCAGTTCATGCTGCACGATGAGAT CGAGACCCACGAGCTGGCGACGCCGGAAGAAGCCTATGAGAAGGGCGTCGACTGGCTGGCGCCGAACGTGGTGTTGCTGG GCGTCTCCTTTCTCAAGCAGCGTGGGCCCGAGCTGGTGCGAGAGATTGCCGCCAAATTCAAGGGCGTCCGCATTCTGATC GTGACGGCGAAGGCCGACGAGGCGATCGCCATCGAAGGACTGAAGGCGGGCGCGCATGGCGCGGTGGTCAAGCCGCTGAC GATCGAGTCGGTGCGCAAGAAGGTCGACACCATCCTCGGCCGCGCCGGCGGCGCGCAGCTGGTCCAACTCGGCGGGCTTT GA
Upstream 100 bases:
>100_bases CCGGAACGGGATTTGCTAGATCCTCATCGCAGCCTTGCGGCCAAGGATCTTGCGATTTGAGGAGGATGCGATGCAGATCG GAGTGGAGACGGCGAAAGCG
Downstream 100 bases:
>100_bases CGTGACCACCGTCGTGTTCTACGAAAAGCCGGGCTGCGGCACCAACGCCCGGCAGAAGCTGATGCTGACGCGCGCCGGCC ATGAGGTCGAGGCCAGGAAT
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Response Regulator Receiver; Response Regulator; Transcriptional Regulatory Protein; Two Component Response Regulator Protein
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MDQRRVFVIDDDEITRAALQFMLHDEIETHELATPEEAYEKGVDWLAPNVVLLGVSFLKQRGPELVREIAAKFKGVRILI VTAKADEAIAIEGLKAGAHGAVVKPLTIESVRKKVDTILGRAGGAQLVQLGGL
Sequences:
>Translated_133_residues MDQRRVFVIDDDEITRAALQFMLHDEIETHELATPEEAYEKGVDWLAPNVVLLGVSFLKQRGPELVREIAAKFKGVRILI VTAKADEAIAIEGLKAGAHGAVVKPLTIESVRKKVDTILGRAGGAQLVQLGGL >Mature_133_residues MDQRRVFVIDDDEITRAALQFMLHDEIETHELATPEEAYEKGVDWLAPNVVLLGVSFLKQRGPELVREIAAKFKGVRILI VTAKADEAIAIEGLKAGAHGAVVKPLTIESVRKKVDTILGRAGGAQLVQLGGL
Specific function: Member Of The Two-Component Regulatory System Crec/Creb Involved In Catabolic Regulation. [C]
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14466; Mature: 14466
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQRRVFVIDDDEITRAALQFMLHDEIETHELATPEEAYEKGVDWLAPNVVLLGVSFLKQ CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHCCCHHHHHHHHHHHC RGPELVREIAAKFKGVRILIVTAKADEAIAIEGLKAGAHGAVVKPLTIESVRKKVDTILG CCHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHC RAGGAQLVQLGGL CCCCCEEEEECCC >Mature Secondary Structure MDQRRVFVIDDDEITRAALQFMLHDEIETHELATPEEAYEKGVDWLAPNVVLLGVSFLKQ CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHCCCHHHHHHHHHHHC RGPELVREIAAKFKGVRILIVTAKADEAIAIEGLKAGAHGAVVKPLTIESVRKKVDTILG CCHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHC RAGGAQLVQLGGL CCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA