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The map label for this gene is nifQ [H]

Identifier: 146342239

GI number: 146342239

Start: 5596581

End: 5597306

Strand: Reverse

Name: nifQ [H]

Synonym: BRADO5393

Alternate gene names: 146342239

Gene position: 5597306-5596581 (Counterclockwise)

Preceding gene: 146342240

Following gene: 146342238

Centisome position: 75.07

GC content: 65.98

Gene sequence:

>726_bases
ATGACCATCGCAATCGTCGATACGTCGCATGCCGCCGCGGTGCACCTGCAAGCACCGCTCGCCTTCGAGGACGACAAGCG
GCATCATGGCCGGCAGATCTACCGCCTGCTGACAGGCAACGACCCAGCCGAGGCAGTCATCGACGATGATTTCAACTTCG
ACCGCCATGTGATCGCATCGATCCTGGCGGTGTCGGCGATGGAGCATGGTGCGCTCGCGGAGCGCGCGGGGCTTTCGACC
GTCGAGCTGATTGCGCTATTGGCGCAGCTGTTTCCTGCCGCAGCAATCGATTCCACCTGGCTGCCGATCAACGGCGCCGC
GCCGGCGCCCGATGATGACGAGATCGCGATGGTGCGAGACCTGCTCGCCGCGCAGCGCTCGACCGATGGCGATATCAGCC
GCTGGCTCGCGGCGATGGTCGCGCGCCGCGCGATGGAGCCGAACCATCTCTGGGAAGACCTGGGCCTGCGCGAGCGCTCC
GAATTGTCGCGGCTGCTGATGCGCCATTTCGCGCCGCTGGCTAGCCGGAACGTCAGAAACATGCGCTGGAAGCGCTTCTT
CTATCGCATGCTGTGCGAGGACGACGGCTTCGTGATGTGCACGACGCCGGTCTGCACCCAATGCAACGATTTCGCGCTCT
GCTTCGGCGAGGAGAGCGGCGAGAGCCGGATGGCGGAGCGGCGCCGCGAGGTGGCGCTGCAGGAGGCGGCCAGCGCCGCA
CAGTGA

Upstream 100 bases:

>100_bases
CGCCGCAACGGCTTAAGCAGTCTTGGTACCGGCCTTCCTCCCGTCGGAAGGCCGGTACCTCTTCTTCGAACTCTCATCGG
CCTCGATAGGAGATCGCGCC

Downstream 100 bases:

>100_bases
GTTCGAGGAACTGCGACGATGTTGATGGACCCCCAGCTCGGATCCCCCTGCAACTCCGACCACGGACGCTGTCCCGAAGC
GGAGACCTGCAAGGCTGGCG

Product: putative nitrogen fixation protein nifQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTIAIVDTSHAAAVHLQAPLAFEDDKRHHGRQIYRLLTGNDPAEAVIDDDFNFDRHVIASILAVSAMEHGALAERAGLST
VELIALLAQLFPAAAIDSTWLPINGAAPAPDDDEIAMVRDLLAAQRSTDGDISRWLAAMVARRAMEPNHLWEDLGLRERS
ELSRLLMRHFAPLASRNVRNMRWKRFFYRMLCEDDGFVMCTTPVCTQCNDFALCFGEESGESRMAERRREVALQEAASAA
Q

Sequences:

>Translated_241_residues
MTIAIVDTSHAAAVHLQAPLAFEDDKRHHGRQIYRLLTGNDPAEAVIDDDFNFDRHVIASILAVSAMEHGALAERAGLST
VELIALLAQLFPAAAIDSTWLPINGAAPAPDDDEIAMVRDLLAAQRSTDGDISRWLAAMVARRAMEPNHLWEDLGLRERS
ELSRLLMRHFAPLASRNVRNMRWKRFFYRMLCEDDGFVMCTTPVCTQCNDFALCFGEESGESRMAERRREVALQEAASAA
Q
>Mature_240_residues
TIAIVDTSHAAAVHLQAPLAFEDDKRHHGRQIYRLLTGNDPAEAVIDDDFNFDRHVIASILAVSAMEHGALAERAGLSTV
ELIALLAQLFPAAAIDSTWLPINGAAPAPDDDEIAMVRDLLAAQRSTDGDISRWLAAMVARRAMEPNHLWEDLGLRERSE
LSRLLMRHFAPLASRNVRNMRWKRFFYRMLCEDDGFVMCTTPVCTQCNDFALCFGEESGESRMAERRREVALQEAASAAQ

Specific function: Probably involved in molybdenum processing [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006975 [H]

Pfam domain/function: PF04891 NifQ [H]

EC number: NA

Molecular weight: Translated: 26863; Mature: 26732

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAIVDTSHAAAVHLQAPLAFEDDKRHHGRQIYRLLTGNDPAEAVIDDDFNFDRHVIAS
CEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHH
ILAVSAMEHGALAERAGLSTVELIALLAQLFPAAAIDSTWLPINGAAPAPDDDEIAMVRD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
LLAAQRSTDGDISRWLAAMVARRAMEPNHLWEDLGLRERSELSRLLMRHFAPLASRNVRN
HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH
MRWKRFFYRMLCEDDGFVMCTTPVCTQCNDFALCFGEESGESRMAERRREVALQEAASAA
HHHHHHHHHHHHCCCCEEEECCCHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
Q
C
>Mature Secondary Structure 
TIAIVDTSHAAAVHLQAPLAFEDDKRHHGRQIYRLLTGNDPAEAVIDDDFNFDRHVIAS
EEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHH
ILAVSAMEHGALAERAGLSTVELIALLAQLFPAAAIDSTWLPINGAAPAPDDDEIAMVRD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
LLAAQRSTDGDISRWLAAMVARRAMEPNHLWEDLGLRERSELSRLLMRHFAPLASRNVRN
HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH
MRWKRFFYRMLCEDDGFVMCTTPVCTQCNDFALCFGEESGESRMAERRREVALQEAASAA
HHHHHHHHHHHHCCCCEEEECCCHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]