| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is livK [C]
Identifier: 146342227
GI number: 146342227
Start: 5585218
End: 5587572
Strand: Direct
Name: livK [C]
Synonym: BRADO5379
Alternate gene names: 146342227
Gene position: 5585218-5587572 (Clockwise)
Preceding gene: 146342226
Following gene: 146342229
Centisome position: 74.9
GC content: 63.91
Gene sequence:
>2355_bases ATGATGCAGGGCATCGACACTGCGATTCGTGCCGACGTGACGGCCCCGTGCAGTTCAGGTTTGCCGCGCCCGGCACGGCC GGTGAGCCGTGCGGAGATGACCGGAAAGGCAGCCTGTCTCGCGCTCGCATTCGCAATTCCGCTGCAGGTCGCCCAGCCCC GTCCAGCCGCAGCCGCCGGTAATGAAATCCGCATCGGCAACACCATGCCCTATAGCGGCCCGGCGCTCGCCTACGGCGTC ATCGGCAAGGCGATCACGGCCTATTTCAACAAGGTCAACGCCGAAGGCGGCATCGACGGCCGCCGCATCAGTTTCATTTC TTATGACGACGGCTACAATCCGCAGAAGACGGTCGAGATGACTCGCAAGCTCGTCGAGGAGGACAATGTCCTGCTGATGT TTGCCAGCCTGGGCACCGCCACGAGCCTCGCCGTCCGTCCCTATCTGAACGCCAACAAGATTCCGCAGCTCTTCGTCGCT TCCGGCTCCTCGCAATGGGATCAGTCGCAGGACTTTCCCTGGACCATGGGCTTTCAGCCGAGCTACCAGACCGAGGCGCA CATCTTCGCGCAATATCTGCTCGAGACGCATTCACGCGGCAAGATCGCGATCCTCTATCAAGATGATGATTTCGGCAAGG ACTACATCAAGGGCCTGAAGGATGCTCTCGGCGGCAAGATTCCGGTGGTCGCCGAGGCCGGCTACAAGGTCACCGATGCA AACGTCAACCAGCAGATCGCGACCTTGAAGGCCTCGGGCGCCGACATCCTGCTCGACGTCACCACCCCGAAATTCGCGAT CATGGCAATCCGGCGAGTCGCCGAGATCGGCTGGCATCCGGACCATCTCCTCACCTCGGTGTCGGATTCGACCTCCGCGG TGATGCTGGCCGCCGGCGCGCAGAATTCGGAAGGCATCCTGTCCGCCAACTACTTCACCGATGAGGACGACACGGCGACG ACCGACGATCCGGCCCACCGCGAATGGGCGTCGTTCATGGACCGCTACCTGCCTCAGGTCTCGCGCAGCAACGGACTTGC GATCTACGGCTATATCGTCGCCGAGACGATGGTGGCCGTGCTGAAGCAATGCGGCGACGATCTGTCGCGCGAGAACATCA TCAGGCAGGCATCGTCCCTCAAGGGCCTCCAGGTGCCGATGCTGCTGCCGGGCATCACGATCAACACCAGCGTCCACGAT CACGCGCCGCTGGAGCAGATGCAGATGATGCAGTTCATCGGCGGCAAATGGCAGCGCTTCGGTCCGGTCCGCAGCGGCAT CGACCCAGGTACCGTCAGCGAGTCCTTCAAGACGATCTTCCGCTACGGCACCGCGAAGAAGGATCTCGCCAATCAGTTGA ACGCGAACACCGTGACGCTGATGACCGGATCGTTCGGCAGCACCTATGCCAACATGGGCGCGGATCTCGCTTCGGTCCTC GACAAGGGCGCCGAACTGCGGGTCCTGCCGGTGATCGGTCGCGGCTCGGTGCAGTCGGTGGCCGACATCCTGCTCCTGCG CGGCGTCGATGCGGGCGTCATCCGCAAGGACACCCTCGCCTTCCTCGAACGGAAGGACTTCGCCAACAACGTCCGCGAGC AGCTGGTCTATGTCGCCAAGCTGTTCAACGAGGAAATGCACGTGGTGGCGCCGAGATCGATCACCAGCTTGAGCGAGCTC GACGGCAAGACGATCGCCGTCGACCTTCCCGATGGCGGCACCTTCGTCACCTCGATCAACGTGTTCGAGCGTCTGGGGAT CAGGCCGCATCTGCTCTACATCGAGCCGCGGCTCGCGGTCGACATGCTGCGCCGGGGCGACATCGACGCGATTATCGCCG TCGAGGGCAAGCCGCTGCAATGGCTGAGCCAGATCAGGGATCCGAACCTGCATCTCGTGCCGGTCGAGTACGACAAGGCG CTCCGCGAGGACTATCTGCCGGCGCAGCTGTCAGCCGAGGACTATCCGAACCTCGTCAGCGCCGGCACCCCGGTGAACAC GATCGCCGCCGAGGCGCTGCTGGCGTCGTATAATTGGCAGGCCGGCAGCGATCGCCACCGCCGGCTGTCGCTGCTGGTCG AAGCGCTGTTCAACAACCTTCAGACGCTGCAGCGGCCGCCGTTTCATCCGAAATGGCTGGAGGTCGCGCCGCTGGCGCCG ATCGCCGGCTGGACCCGGTTCAAGACGGCGCAGGACTGGCTCGATCGCAATATGCCGGCAGCCCAGGTGGTGGGCGCCAA TGCCCAGGCCAGCGACCTCCCGCCGAACGCGGCGAACGACCCGAAACTGTTTCGCGAGTTCCTGGAGTGGCGGGCCAACC GCCAGAAGCGGCCGGCCGCCCGGCCGCCGCAATGA
Upstream 100 bases:
>100_bases ACGTCAGATCTCAGCTTCTCAGACGCGATCCGGACCGCCTGGCAACAAGGGCGGCAGCGATCCCCTGCGCTCAAAAGCCG GACCATCGACGGGAGGATTC
Downstream 100 bases:
>100_bases TCGATGCAAAGCGTCAGGCCGCTGCCCTGGTGATCCTGACCTGCACGTCGCAGGGACGCGCGAGATAAGGCGCGGAGGTG ACGAGCACATCGGCGCCAGC
Product: putative ABC/TRAP transporter periplasmic binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MMQGIDTAIRADVTAPCSSGLPRPARPVSRAEMTGKAACLALAFAIPLQVAQPRPAAAAGNEIRIGNTMPYSGPALAYGV IGKAITAYFNKVNAEGGIDGRRISFISYDDGYNPQKTVEMTRKLVEEDNVLLMFASLGTATSLAVRPYLNANKIPQLFVA SGSSQWDQSQDFPWTMGFQPSYQTEAHIFAQYLLETHSRGKIAILYQDDDFGKDYIKGLKDALGGKIPVVAEAGYKVTDA NVNQQIATLKASGADILLDVTTPKFAIMAIRRVAEIGWHPDHLLTSVSDSTSAVMLAAGAQNSEGILSANYFTDEDDTAT TDDPAHREWASFMDRYLPQVSRSNGLAIYGYIVAETMVAVLKQCGDDLSRENIIRQASSLKGLQVPMLLPGITINTSVHD HAPLEQMQMMQFIGGKWQRFGPVRSGIDPGTVSESFKTIFRYGTAKKDLANQLNANTVTLMTGSFGSTYANMGADLASVL DKGAELRVLPVIGRGSVQSVADILLLRGVDAGVIRKDTLAFLERKDFANNVREQLVYVAKLFNEEMHVVAPRSITSLSEL DGKTIAVDLPDGGTFVTSINVFERLGIRPHLLYIEPRLAVDMLRRGDIDAIIAVEGKPLQWLSQIRDPNLHLVPVEYDKA LREDYLPAQLSAEDYPNLVSAGTPVNTIAAEALLASYNWQAGSDRHRRLSLLVEALFNNLQTLQRPPFHPKWLEVAPLAP IAGWTRFKTAQDWLDRNMPAAQVVGANAQASDLPPNAANDPKLFREFLEWRANRQKRPAARPPQ
Sequences:
>Translated_784_residues MMQGIDTAIRADVTAPCSSGLPRPARPVSRAEMTGKAACLALAFAIPLQVAQPRPAAAAGNEIRIGNTMPYSGPALAYGV IGKAITAYFNKVNAEGGIDGRRISFISYDDGYNPQKTVEMTRKLVEEDNVLLMFASLGTATSLAVRPYLNANKIPQLFVA SGSSQWDQSQDFPWTMGFQPSYQTEAHIFAQYLLETHSRGKIAILYQDDDFGKDYIKGLKDALGGKIPVVAEAGYKVTDA NVNQQIATLKASGADILLDVTTPKFAIMAIRRVAEIGWHPDHLLTSVSDSTSAVMLAAGAQNSEGILSANYFTDEDDTAT TDDPAHREWASFMDRYLPQVSRSNGLAIYGYIVAETMVAVLKQCGDDLSRENIIRQASSLKGLQVPMLLPGITINTSVHD HAPLEQMQMMQFIGGKWQRFGPVRSGIDPGTVSESFKTIFRYGTAKKDLANQLNANTVTLMTGSFGSTYANMGADLASVL DKGAELRVLPVIGRGSVQSVADILLLRGVDAGVIRKDTLAFLERKDFANNVREQLVYVAKLFNEEMHVVAPRSITSLSEL DGKTIAVDLPDGGTFVTSINVFERLGIRPHLLYIEPRLAVDMLRRGDIDAIIAVEGKPLQWLSQIRDPNLHLVPVEYDKA LREDYLPAQLSAEDYPNLVSAGTPVNTIAAEALLASYNWQAGSDRHRRLSLLVEALFNNLQTLQRPPFHPKWLEVAPLAP IAGWTRFKTAQDWLDRNMPAAQVVGANAQASDLPPNAANDPKLFREFLEWRANRQKRPAARPPQ >Mature_784_residues MMQGIDTAIRADVTAPCSSGLPRPARPVSRAEMTGKAACLALAFAIPLQVAQPRPAAAAGNEIRIGNTMPYSGPALAYGV IGKAITAYFNKVNAEGGIDGRRISFISYDDGYNPQKTVEMTRKLVEEDNVLLMFASLGTATSLAVRPYLNANKIPQLFVA SGSSQWDQSQDFPWTMGFQPSYQTEAHIFAQYLLETHSRGKIAILYQDDDFGKDYIKGLKDALGGKIPVVAEAGYKVTDA NVNQQIATLKASGADILLDVTTPKFAIMAIRRVAEIGWHPDHLLTSVSDSTSAVMLAAGAQNSEGILSANYFTDEDDTAT TDDPAHREWASFMDRYLPQVSRSNGLAIYGYIVAETMVAVLKQCGDDLSRENIIRQASSLKGLQVPMLLPGITINTSVHD HAPLEQMQMMQFIGGKWQRFGPVRSGIDPGTVSESFKTIFRYGTAKKDLANQLNANTVTLMTGSFGSTYANMGADLASVL DKGAELRVLPVIGRGSVQSVADILLLRGVDAGVIRKDTLAFLERKDFANNVREQLVYVAKLFNEEMHVVAPRSITSLSEL DGKTIAVDLPDGGTFVTSINVFERLGIRPHLLYIEPRLAVDMLRRGDIDAIIAVEGKPLQWLSQIRDPNLHLVPVEYDKA LREDYLPAQLSAEDYPNLVSAGTPVNTIAAEALLASYNWQAGSDRHRRLSLLVEALFNNLQTLQRPPFHPKWLEVAPLAP IAGWTRFKTAQDWLDRNMPAAQVVGANAQASDLPPNAANDPKLFREFLEWRANRQKRPAARPPQ
Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85780; Mature: 85780
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQGIDTAIRADVTAPCSSGLPRPARPVSRAEMTGKAACLALAFAIPLQVAQPRPAAAAG CCCCCCHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NEIRIGNTMPYSGPALAYGVIGKAITAYFNKVNAEGGIDGRRISFISYDDGYNPQKTVEM CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHH TRKLVEEDNVLLMFASLGTATSLAVRPYLNANKIPQLFVASGSSQWDQSQDFPWTMGFQP HHHHHCCCCEEEEEECCCCCHHEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCC SYQTEAHIFAQYLLETHSRGKIAILYQDDDFGKDYIKGLKDALGGKIPVVAEAGYKVTDA CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCEEECC NVNQQIATLKASGADILLDVTTPKFAIMAIRRVAEIGWHPDHLLTSVSDSTSAVMLAAGA CCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECC QNSEGILSANYFTDEDDTATTDDPAHREWASFMDRYLPQVSRSNGLAIYGYIVAETMVAV CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH LKQCGDDLSRENIIRQASSLKGLQVPMLLPGITINTSVHDHAPLEQMQMMQFIGGKWQRF HHHHCCHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHCCCHHHC GPVRSGIDPGTVSESFKTIFRYGTAKKDLANQLNANTVTLMTGSFGSTYANMGADLASVL CCHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCHHHHHCHHHHHHH DKGAELRVLPVIGRGSVQSVADILLLRGVDAGVIRKDTLAFLERKDFANNVREQLVYVAK CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFNEEMHVVAPRSITSLSELDGKTIAVDLPDGGTFVTSINVFERLGIRPHLLYIEPRLAV HHCCCEEEECCCCHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHCCCCEEEEEECCHHHH DMLRRGDIDAIIAVEGKPLQWLSQIRDPNLHLVPVEYDKALREDYLPAQLSAEDYPNLVS HHHHCCCCCEEEEECCCCHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCHHC AGTPVNTIAAEALLASYNWQAGSDRHRRLSLLVEALFNNLQTLQRPPFHPKWLEVAPLAP CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC IAGWTRFKTAQDWLDRNMPAAQVVGANAQASDLPPNAANDPKLFREFLEWRANRQKRPAA CCCCHHHHHHHHHHHCCCCHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC RPPQ CCCC >Mature Secondary Structure MMQGIDTAIRADVTAPCSSGLPRPARPVSRAEMTGKAACLALAFAIPLQVAQPRPAAAAG CCCCCCHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NEIRIGNTMPYSGPALAYGVIGKAITAYFNKVNAEGGIDGRRISFISYDDGYNPQKTVEM CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHH TRKLVEEDNVLLMFASLGTATSLAVRPYLNANKIPQLFVASGSSQWDQSQDFPWTMGFQP HHHHHCCCCEEEEEECCCCCHHEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCC SYQTEAHIFAQYLLETHSRGKIAILYQDDDFGKDYIKGLKDALGGKIPVVAEAGYKVTDA CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCEEECC NVNQQIATLKASGADILLDVTTPKFAIMAIRRVAEIGWHPDHLLTSVSDSTSAVMLAAGA CCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECC QNSEGILSANYFTDEDDTATTDDPAHREWASFMDRYLPQVSRSNGLAIYGYIVAETMVAV CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH LKQCGDDLSRENIIRQASSLKGLQVPMLLPGITINTSVHDHAPLEQMQMMQFIGGKWQRF HHHHCCHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHCCCHHHC GPVRSGIDPGTVSESFKTIFRYGTAKKDLANQLNANTVTLMTGSFGSTYANMGADLASVL CCHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCHHHHHCHHHHHHH DKGAELRVLPVIGRGSVQSVADILLLRGVDAGVIRKDTLAFLERKDFANNVREQLVYVAK CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFNEEMHVVAPRSITSLSELDGKTIAVDLPDGGTFVTSINVFERLGIRPHLLYIEPRLAV HHCCCEEEECCCCHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHCCCCEEEEEECCHHHH DMLRRGDIDAIIAVEGKPLQWLSQIRDPNLHLVPVEYDKALREDYLPAQLSAEDYPNLVS HHHHCCCCCEEEEECCCCHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCHHC AGTPVNTIAAEALLASYNWQAGSDRHRRLSLLVEALFNNLQTLQRPPFHPKWLEVAPLAP CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC IAGWTRFKTAQDWLDRNMPAAQVVGANAQASDLPPNAANDPKLFREFLEWRANRQKRPAA CCCCHHHHHHHHHHHCCCCHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC RPPQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA