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The map label for this gene is 146342104

Identifier: 146342104

GI number: 146342104

Start: 5460367

End: 5460696

Strand: Direct

Name: 146342104

Synonym: BRADO5248

Alternate gene names: NA

Gene position: 5460367-5460696 (Clockwise)

Preceding gene: 146342102

Following gene: 146342111

Centisome position: 73.23

GC content: 65.15

Gene sequence:

>330_bases
ATGGCAACGACGCGCTTCGATGCCGCAGAATATCTTGCAGAGCCGGAGGCCCAAGCCGAATTCCTGGCGGCGGCGCTCGA
GGATGGCACCGCTGATGACATCCGCGCTGCGATCAACACAATTGCCCGGGCACGCGGCATGTCAGAGGTCGCCAAGGCGA
CCGGCATCCGTCGCGAGCAGCTGTATCGGGCTCTTGGTGAAGACGGAAACCCGGAGTTCGCGACCATCCTGAAGGTGCTG
CGCGCCCTCGGCGTGAAGCTCACCGCGGCGCCCCCCAAGGCGGCTCCGAAGCGGAAGAGCGCAAAGAAAACAAGTCGGCG
GGCGGCTTAG

Upstream 100 bases:

>100_bases
AGGCAAGATATTGGTGATCCTGCTTTGCGGAGGTGACAAGAGCACCCAGCGTTCCGATATCCGGCGCGCTCAGGAATTGG
CTGAGAGAGAGGAATAGCGA

Downstream 100 bases:

>100_bases
TTCCTGACCGCTGCCGCCCACATCGAAACCAAAGCCCTATTGGCGTGAATCGTCAGGTCTTCAAAACAGAAGGCCGGATC
GGGATAAACCGATCCGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MATTRFDAAEYLAEPEAQAEFLAAALEDGTADDIRAAINTIARARGMSEVAKATGIRREQLYRALGEDGNPEFATILKVL
RALGVKLTAAPPKAAPKRKSAKKTSRRAA

Sequences:

>Translated_109_residues
MATTRFDAAEYLAEPEAQAEFLAAALEDGTADDIRAAINTIARARGMSEVAKATGIRREQLYRALGEDGNPEFATILKVL
RALGVKLTAAPPKAAPKRKSAKKTSRRAA
>Mature_108_residues
ATTRFDAAEYLAEPEAQAEFLAAALEDGTADDIRAAINTIARARGMSEVAKATGIRREQLYRALGEDGNPEFATILKVLR
ALGVKLTAAPPKAAPKRKSAKKTSRRAA

Specific function: Unknown

COG id: COG3636

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014057
- InterPro:   IPR001387 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11641; Mature: 11510

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTRFDAAEYLAEPEAQAEFLAAALEDGTADDIRAAINTIARARGMSEVAKATGIRREQ
CCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
LYRALGEDGNPEFATILKVLRALGVKLTAAPPKAAPKRKSAKKTSRRAA
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ATTRFDAAEYLAEPEAQAEFLAAALEDGTADDIRAAINTIARARGMSEVAKATGIRREQ
CCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
LYRALGEDGNPEFATILKVLRALGVKLTAAPPKAAPKRKSAKKTSRRAA
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]