| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146341704
Identifier: 146341704
GI number: 146341704
Start: 5006360
End: 5007568
Strand: Reverse
Name: 146341704
Synonym: BRADO4809
Alternate gene names: NA
Gene position: 5007568-5006360 (Counterclockwise)
Preceding gene: 146341705
Following gene: 146341703
Centisome position: 67.16
GC content: 67.0
Gene sequence:
>1209_bases ATGAGACGATCCATTGCCGCCGGCGTGACCGCGCTGGCCGCCGTGCTGCTGCTGGCCACGCCGGCCCGCGCCGACGAGAA GCCCTTCCGCATCCTGGTGATCGACGACCTCACCGGCATCTATCAGGGCAATGGCGGCCCGAACACCGTGCTCGCCACGA CGATGGCGGCGGAGGATTTTGGCGGCAAGGTGCTGGGCCGCAAGGTCGAGGTGCTCTCGGCCAACCACCAGAACAAGCCC GATATCGCCGCCTCGCTCGCCGGCCGCTACATCGATCAGGAGGGCGTGAGCGCGCTGGTGCTCGGCGGCTCGAGCTCCGC GGGTCTCGCGGCGCAGGCCATCGCCAAGCAGCGCGGCATCACCACCTTGGTGACCGGCGGCTATGCCTCCAACTTCTCCG GGGATCAGTGCTCGCCCTATGGCACGCAATGGGCGCCGTCCACCGACGCGCTGTCGAACGCGGTCGCGAAGGGCCTCGTC GATGCCGGCGCGAAGAAGTGGTTCTTCATCACCGCCGACTACGTGTTCGGCAAGTCCCTGTCCTCGGATGCCTCGAAGGC CGTGACTGCGGCGGGCGGCAGCGTGGTGGGAGAGGCCAAGCATCCGCTCGACTCGCCAGACATGGCCTCGCAGATCCTGC AGGCGCAGGGCTCGGGCGCCGACATCATCGCGCTCGCCAACGCCGGCCCCGATCTCGTCACCACGATCAAGCAGGCGCGC GAATTCGGCATGGGCGACAAGCTCGCGGCCATGCTGGTGTTCACCAACAACGTCGTGTCGATGGGCCTCGACGTCGCCCA GGGCATGAAATTCCCGGTCGCGTTCTACTGGGACCAGAACGACGCCTCGCGCGCCTGGGGGCAGCGCTTCATGGCCCGCA ACAACAAGCAGGTGCCGACGATGGGGCACGCGCTCGCCTACGTCGCGACCCAGCACTATCTGAGATCGGTGCAGAAGGCC GGCACGGACGACGCCAAGACGATCGCCAAGACCATCCGCGAAATCCCGATCGACAGCCCGATGGTCTCCAATGCCAGGAT CCAGGCCAACGGCCGCGTCGTGATGGACCTGATGATCGCCGAAGTGAAGACGCCGAAGGAGTCCAAGGACCCGGCGGCCG ATCTCTACAAGATCCGCACCACGATCCCCGGCGCCAGCCTGTTCACGCCGGCCGAGAAGAGTGGCTGTCCGTCGCTGCTG TCGGAGTAA
Upstream 100 bases:
>100_bases GGCGAGCACAGCGCCGACATCCGCGCCGAATTCGCCGATCGAAAAGTGCCTGCCGAGTGATCGTTCCGAACCAACCCAAC AACGCCCGAGGAGACCTGTC
Downstream 100 bases:
>100_bases GGAGCGATGATGCGCATTCTCACCAACACCACCAGCCCCTATGCGCGGATCGCGCGCATCGCGCTCGCCGAGAAGGGGTT CGATCTCGGCGGCACTGAAG
Product: putative branched-chain amino acid ABC transporter periplasmic binding protein
Products: NA
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Signal Peptide; ABC Transporter; Amino Acid ABC Transporter Periplasmic Protein; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MRRSIAAGVTALAAVLLLATPARADEKPFRILVIDDLTGIYQGNGGPNTVLATTMAAEDFGGKVLGRKVEVLSANHQNKP DIAASLAGRYIDQEGVSALVLGGSSSAGLAAQAIAKQRGITTLVTGGYASNFSGDQCSPYGTQWAPSTDALSNAVAKGLV DAGAKKWFFITADYVFGKSLSSDASKAVTAAGGSVVGEAKHPLDSPDMASQILQAQGSGADIIALANAGPDLVTTIKQAR EFGMGDKLAAMLVFTNNVVSMGLDVAQGMKFPVAFYWDQNDASRAWGQRFMARNNKQVPTMGHALAYVATQHYLRSVQKA GTDDAKTIAKTIREIPIDSPMVSNARIQANGRVVMDLMIAEVKTPKESKDPAADLYKIRTTIPGASLFTPAEKSGCPSLL SE
Sequences:
>Translated_402_residues MRRSIAAGVTALAAVLLLATPARADEKPFRILVIDDLTGIYQGNGGPNTVLATTMAAEDFGGKVLGRKVEVLSANHQNKP DIAASLAGRYIDQEGVSALVLGGSSSAGLAAQAIAKQRGITTLVTGGYASNFSGDQCSPYGTQWAPSTDALSNAVAKGLV DAGAKKWFFITADYVFGKSLSSDASKAVTAAGGSVVGEAKHPLDSPDMASQILQAQGSGADIIALANAGPDLVTTIKQAR EFGMGDKLAAMLVFTNNVVSMGLDVAQGMKFPVAFYWDQNDASRAWGQRFMARNNKQVPTMGHALAYVATQHYLRSVQKA GTDDAKTIAKTIREIPIDSPMVSNARIQANGRVVMDLMIAEVKTPKESKDPAADLYKIRTTIPGASLFTPAEKSGCPSLL SE >Mature_402_residues MRRSIAAGVTALAAVLLLATPARADEKPFRILVIDDLTGIYQGNGGPNTVLATTMAAEDFGGKVLGRKVEVLSANHQNKP DIAASLAGRYIDQEGVSALVLGGSSSAGLAAQAIAKQRGITTLVTGGYASNFSGDQCSPYGTQWAPSTDALSNAVAKGLV DAGAKKWFFITADYVFGKSLSSDASKAVTAAGGSVVGEAKHPLDSPDMASQILQAQGSGADIIALANAGPDLVTTIKQAR EFGMGDKLAAMLVFTNNVVSMGLDVAQGMKFPVAFYWDQNDASRAWGQRFMARNNKQVPTMGHALAYVATQHYLRSVQKA GTDDAKTIAKTIREIPIDSPMVSNARIQANGRVVMDLMIAEVKTPKESKDPAADLYKIRTTIPGASLFTPAEKSGCPSLL SE
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42069; Mature: 42069
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSIAAGVTALAAVLLLATPARADEKPFRILVIDDLTGIYQGNGGPNTVLATTMAAEDF CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEEEEHHHHC GGKVLGRKVEVLSANHQNKPDIAASLAGRYIDQEGVSALVLGGSSSAGLAAQAIAKQRGI CCHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCC TTLVTGGYASNFSGDQCSPYGTQWAPSTDALSNAVAKGLVDAGAKKWFFITADYVFGKSL EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCC SSDASKAVTAAGGSVVGEAKHPLDSPDMASQILQAQGSGADIIALANAGPDLVTTIKQAR CCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH EFGMGDKLAAMLVFTNNVVSMGLDVAQGMKFPVAFYWDQNDASRAWGQRFMARNNKQVPT HCCCCCHHEEEEEECCCHHHHCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC MGHALAYVATQHYLRSVQKAGTDDAKTIAKTIREIPIDSPMVSNARIQANGRVVMDLMIA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEHHH EVKTPKESKDPAADLYKIRTTIPGASLFTPAEKSGCPSLLSE HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure MRRSIAAGVTALAAVLLLATPARADEKPFRILVIDDLTGIYQGNGGPNTVLATTMAAEDF CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEEEEHHHHC GGKVLGRKVEVLSANHQNKPDIAASLAGRYIDQEGVSALVLGGSSSAGLAAQAIAKQRGI CCHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCC TTLVTGGYASNFSGDQCSPYGTQWAPSTDALSNAVAKGLVDAGAKKWFFITADYVFGKSL EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCC SSDASKAVTAAGGSVVGEAKHPLDSPDMASQILQAQGSGADIIALANAGPDLVTTIKQAR CCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH EFGMGDKLAAMLVFTNNVVSMGLDVAQGMKFPVAFYWDQNDASRAWGQRFMARNNKQVPT HCCCCCHHEEEEEECCCHHHHCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC MGHALAYVATQHYLRSVQKAGTDDAKTIAKTIREIPIDSPMVSNARIQANGRVVMDLMIA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEHHH EVKTPKESKDPAADLYKIRTTIPGASLFTPAEKSGCPSLLSE HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA