BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 146341702

GI number: 146341702

Start: 5004984

End: 5005742

Strand: Reverse

Name: fabG [H]

Synonym: BRADO4807

Alternate gene names: 146341702

Gene position: 5005742-5004984 (Counterclockwise)

Preceding gene: 146341703

Following gene: 146341701

Centisome position: 67.13

GC content: 67.59

Gene sequence:

>759_bases
ATGATACAGCCAAATCTGCTCGACGGCCGCACCATCGTGATCACCGGCGCTGCGACCGGCATCGGCCAGGCTTTCGCGGC
CGGCTGCGCGGCCCACGGCGCCAATGTCGTCGTTGCCGACATGAACGCCGTCGATGAGACGGTGGCGCTGGTCGAGCGTG
CCGGCGGCCGCGCGCTGGCGGTGCGGGTCGACGTCGCCGATGACGGCTCGGTGCGCGACATGGCGGCGGCGGCGATGAAG
GCGTTCGGCCGCATCGACGGGCTGATCACCAATGCCGCGTATTTCCGCGAGGTCAAGCTGACGCCGTTCGATGAGCTCGA
TCCCGCGGTGTGGGACCGCATCTTCGCGGTCAACGTCAAGGGTGTGTGGCACTGCTGCAAGGCGGTGGCGCCGGCCATGC
GCGCACAGCAATCGGGCAGCATCGTCAACATCGCCTCGGTGGTCGCCGTGGCCGGCCAGCCCGGCTACCTGCACTATGTC
GCCACCAAGGGCGCGGTGCTGTCGATGACCAAGGGTCTCGCCAAGGAGATGGGTCCGAACGGCGTGCGCGTCAACGTCAT
CGCGCCCGGCTTCGTGATCACCGATGCGACGCGTAACCGCCCTGTCGAATGGCAACAGAGCTTCCTGAAGGCGCGCGCGC
TGTCGCGCGAGCAGAAGCCGGGCGACCTCGTCGGCACGGCGCTGTATCTCTTGTCCGACCTCGCCGGCTTTGTCTCCGGA
CAGACCATCGTCGTCGACGGCGGCCACATCATGCATTGA

Upstream 100 bases:

>100_bases
CCTGGCGCGAGCCGACACCCAGGCTCGATGCGCTGCGCGACGCCACGGCGGCTCGACCGGCTTTCATGTCGACGCTGCCT
TACGTCTGAGGGAGAGAACC

Downstream 100 bases:

>100_bases
CGCGCACAACGACAACAACAACGAAGGGAAGACGCCAGATGGCCGAGCTGATTCTGCATCATTACGAGCTTTCGACGTTC
TCGGAGAAGATCCGCTCAGC

Product: putative 3-oxoacyl-[acyl-carrier-protein] reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIQPNLLDGRTIVITGAATGIGQAFAAGCAAHGANVVVADMNAVDETVALVERAGGRALAVRVDVADDGSVRDMAAAAMK
AFGRIDGLITNAAYFREVKLTPFDELDPAVWDRIFAVNVKGVWHCCKAVAPAMRAQQSGSIVNIASVVAVAGQPGYLHYV
ATKGAVLSMTKGLAKEMGPNGVRVNVIAPGFVITDATRNRPVEWQQSFLKARALSREQKPGDLVGTALYLLSDLAGFVSG
QTIVVDGGHIMH

Sequences:

>Translated_252_residues
MIQPNLLDGRTIVITGAATGIGQAFAAGCAAHGANVVVADMNAVDETVALVERAGGRALAVRVDVADDGSVRDMAAAAMK
AFGRIDGLITNAAYFREVKLTPFDELDPAVWDRIFAVNVKGVWHCCKAVAPAMRAQQSGSIVNIASVVAVAGQPGYLHYV
ATKGAVLSMTKGLAKEMGPNGVRVNVIAPGFVITDATRNRPVEWQQSFLKARALSREQKPGDLVGTALYLLSDLAGFVSG
QTIVVDGGHIMH
>Mature_252_residues
MIQPNLLDGRTIVITGAATGIGQAFAAGCAAHGANVVVADMNAVDETVALVERAGGRALAVRVDVADDGSVRDMAAAAMK
AFGRIDGLITNAAYFREVKLTPFDELDPAVWDRIFAVNVKGVWHCCKAVAPAMRAQQSGSIVNIASVVAVAGQPGYLHYV
ATKGAVLSMTKGLAKEMGPNGVRVNVIAPGFVITDATRNRPVEWQQSFLKARALSREQKPGDLVGTALYLLSDLAGFVSG
QTIVVDGGHIMH

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI19923817, Length=263, Percent_Identity=30.4182509505703, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=33.5907335907336, Blast_Score=122, Evalue=2e-28,
Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=29.8449612403101, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI126723750, Length=260, Percent_Identity=32.6923076923077, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=31.7991631799163, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI66933014, Length=249, Percent_Identity=32.1285140562249, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=32.7935222672065, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=30.8695652173913, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI4504505, Length=200, Percent_Identity=32, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI10190704, Length=254, Percent_Identity=31.1023622047244, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=28.6290322580645, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI126723191, Length=196, Percent_Identity=32.6530612244898, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=29.4573643410853, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI31542939, Length=200, Percent_Identity=32, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI210032110, Length=198, Percent_Identity=29.2929292929293, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI4503301, Length=257, Percent_Identity=27.2373540856031, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI142976729, Length=196, Percent_Identity=29.0816326530612, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI4503817, Length=215, Percent_Identity=26.046511627907, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI40254986, Length=148, Percent_Identity=33.7837837837838, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI225579078, Length=210, Percent_Identity=27.6190476190476, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=198, Percent_Identity=29.2929292929293, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI302344755, Length=114, Percent_Identity=35.0877192982456, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI40807363, Length=192, Percent_Identity=28.6458333333333, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI83715985, Length=186, Percent_Identity=30.1075268817204, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=33.6, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=38.3720930232558, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1789208, Length=247, Percent_Identity=33.1983805668016, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=34, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=30.6122448979592, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=30.9236947791165, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=31.1740890688259, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=29.8039215686275, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789378, Length=254, Percent_Identity=28.3464566929134, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=32.1138211382114, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=29.2682926829268, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787526, Length=255, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787545, Length=258, Percent_Identity=26.3565891472868, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=25.1937984496124, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=32.5301204819277, Blast_Score=123, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=30.952380952381, Blast_Score=106, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=29.2, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=31.2252964426877, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17568967, Length=203, Percent_Identity=34.9753694581281, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=29.3436293436293, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=27.9352226720648, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=27.0992366412214, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=28.6259541984733, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17560676, Length=255, Percent_Identity=28.6274509803922, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=29.277566539924, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI71982365, Length=192, Percent_Identity=30.7291666666667, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=27.906976744186, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=29.7520661157025, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=254, Percent_Identity=30.3149606299213, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=31.6062176165803, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=26.6409266409266, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=27.2373540856031, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17508895, Length=198, Percent_Identity=30.3030303030303, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=26.0536398467433, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=26.615969581749, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=26.4367816091954, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17567345, Length=250, Percent_Identity=26, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17558628, Length=192, Percent_Identity=31.7708333333333, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=253, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=254, Percent_Identity=29.1338582677165, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=28.735632183908, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17536651, Length=259, Percent_Identity=26.6409266409266, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=28.6852589641434, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=26.6409266409266, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=259, Percent_Identity=27.027027027027, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=27.7566539923954, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=262, Percent_Identity=28.2442748091603, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193203117, Length=201, Percent_Identity=27.8606965174129, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI193203115, Length=201, Percent_Identity=27.8606965174129, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17555612, Length=209, Percent_Identity=29.6650717703349, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=25, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6322861, Length=191, Percent_Identity=34.5549738219895, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=26.2745098039216, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323882, Length=208, Percent_Identity=27.4038461538462, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=34.6774193548387, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI21357041, Length=259, Percent_Identity=31.2741312741313, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=29.2682926829268, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=31.9066147859922, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=31.8367346938775, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=31.8548387096774, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI18859837, Length=193, Percent_Identity=34.7150259067358, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=29.0196078431373, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21357673, Length=201, Percent_Identity=31.3432835820896, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17737361, Length=221, Percent_Identity=31.2217194570136, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24644337, Length=119, Percent_Identity=38.655462184874, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161076933, Length=205, Percent_Identity=27.8048780487805, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24584748, Length=205, Percent_Identity=27.8048780487805, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI21356301, Length=259, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581726, Length=194, Percent_Identity=28.3505154639175, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24640442, Length=196, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26367; Mature: 26367

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQPNLLDGRTIVITGAATGIGQAFAAGCAAHGANVVVADMNAVDETVALVERAGGRALA
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEE
VRVDVADDGSVRDMAAAAMKAFGRIDGLITNAAYFREVKLTPFDELDPAVWDRIFAVNVK
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHEEEECCCCHHCCHHHHHEEEEEECH
GVWHCCKAVAPAMRAQQSGSIVNIASVVAVAGQPGYLHYVATKGAVLSMTKGLAKEMGPN
HHHHHHHHHHHHHHHHCCCCEEEHHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHCCCC
GVRVNVIAPGFVITDATRNRPVEWQQSFLKARALSREQKPGDLVGTALYLLSDLAGFVSG
CEEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
QTIVVDGGHIMH
CEEEEECCEECC
>Mature Secondary Structure
MIQPNLLDGRTIVITGAATGIGQAFAAGCAAHGANVVVADMNAVDETVALVERAGGRALA
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEE
VRVDVADDGSVRDMAAAAMKAFGRIDGLITNAAYFREVKLTPFDELDPAVWDRIFAVNVK
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHEEEECCCCHHCCHHHHHEEEEEECH
GVWHCCKAVAPAMRAQQSGSIVNIASVVAVAGQPGYLHYVATKGAVLSMTKGLAKEMGPN
HHHHHHHHHHHHHHHHCCCCEEEHHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHCCCC
GVRVNVIAPGFVITDATRNRPVEWQQSFLKARALSREQKPGDLVGTALYLLSDLAGFVSG
CEEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
QTIVVDGGHIMH
CEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]