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The map label for this gene is ycjP [C]

Identifier: 146341693

GI number: 146341693

Start: 4995580

End: 4996437

Strand: Reverse

Name: ycjP [C]

Synonym: BRADO4798

Alternate gene names: 146341693

Gene position: 4996437-4995580 (Counterclockwise)

Preceding gene: 146341694

Following gene: 146341692

Centisome position: 67.01

GC content: 62.59

Gene sequence:

>858_bases
ATGGATCACTCCAGTCCCGCCGGGCGCATCTTCCGTGGCATCGCGCTTGCGCTCGTGCTCGTGTTCTTCATGTTCCCGAT
CGTCTGGATCCTGCTGATGTCGTTCCAGACCAATGAGCAGATCCTGCGCATTCCGCCCCGCCTGCTGTTCGAGCCGACGT
TTGCCAATTATGAGGCGCTGATCTCCGGCCAGCTGCGGACCGCGGCGGGCAATCTGCAGATCGAGTTCATGCGCAACCTG
ATGAACAGCTTCGTGCTGTCGAGCGCCTCGGTGATCCTGGCGCTGCTGCTCGGCGTGCCGGCGGCCTACGCGTTCGCGCG
GTTCAAATTCAAGCTCGGCGAGACCATCGCGTTCACGCTGCTGTCGTTCCGCTTCGCGCCGCCGCTTCTGGTGCTGCTGC
CGCTCTCGCTCTACTATCAGCAGCTTGGGCTGAACGACACCTATTTCGGCATCGTCTGGGTCTATCAGCTGATCGCCTTG
CCACTGATTCTGTGGATCGTGCGCGGCTATTTCGAGGACATCAGCCCCGATATCGAGCACGCCTATAGGCTGGCCGGACA
TTCCTGGCGCGAGGCGTTCACCCGCATTGCCGTGCCGCTGGCAGGGCCGGGGATCGCGGCGGCGGGCCTCTTGTCCTTCA
TCTTCTGCTGGAACAATTTTGTCTTCGCGCTGATCCTCGCCTCCGCCGACAAGCAGCCGGTGACAGTCGGCGCGCTCGCC
TTCGTCACCGCCTCGGGCATCCAATACGGCCAGATCGCTGCGGCGATCGTGCTGTCGGTGACGCCGACCTTGCTGCTCGC
ACTCTATGCGCAGCGCTATCTGGTCGAAGGTCTCTCGCTTGGTGCAGTGAAGGGTTGA

Upstream 100 bases:

>100_bases
GATCCTGTGGCTGATCACCAACATCCTGTCGAACATCTTCATCAAGAACTGGCTGCGGCTGCGCGCACGTGCCCACGGTC
ACGCCTGAGGGAGGCCGCTG

Downstream 100 bases:

>100_bases
GCAGCCATGGCGCGCCTCGAACTCAAATCCATCGACAAGAGCTTCGGAGCAGTCAGCTGCGCCAGGGGCGTGTCGCTGAG
CGTCGAACCCGGCGAGATCG

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MDHSSPAGRIFRGIALALVLVFFMFPIVWILLMSFQTNEQILRIPPRLLFEPTFANYEALISGQLRTAAGNLQIEFMRNL
MNSFVLSSASVILALLLGVPAAYAFARFKFKLGETIAFTLLSFRFAPPLLVLLPLSLYYQQLGLNDTYFGIVWVYQLIAL
PLILWIVRGYFEDISPDIEHAYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA
FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG

Sequences:

>Translated_285_residues
MDHSSPAGRIFRGIALALVLVFFMFPIVWILLMSFQTNEQILRIPPRLLFEPTFANYEALISGQLRTAAGNLQIEFMRNL
MNSFVLSSASVILALLLGVPAAYAFARFKFKLGETIAFTLLSFRFAPPLLVLLPLSLYYQQLGLNDTYFGIVWVYQLIAL
PLILWIVRGYFEDISPDIEHAYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA
FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG
>Mature_285_residues
MDHSSPAGRIFRGIALALVLVFFMFPIVWILLMSFQTNEQILRIPPRLLFEPTFANYEALISGQLRTAAGNLQIEFMRNL
MNSFVLSSASVILALLLGVPAAYAFARFKFKLGETIAFTLLSFRFAPPLLVLLPLSLYYQQLGLNDTYFGIVWVYQLIAL
PLILWIVRGYFEDISPDIEHAYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA
FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=273, Percent_Identity=28.2051282051282, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790464, Length=213, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1789860, Length=212, Percent_Identity=24.0566037735849, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31400; Mature: 31400

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHSSPAGRIFRGIALALVLVFFMFPIVWILLMSFQTNEQILRIPPRLLFEPTFANYEAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCCCHHHH
ISGQLRTAAGNLQIEFMRNLMNSFVLSSASVILALLLGVPAAYAFARFKFKLGETIAFTL
HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFRFAPPLLVLLPLSLYYQQLGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA
HHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDHSSPAGRIFRGIALALVLVFFMFPIVWILLMSFQTNEQILRIPPRLLFEPTFANYEAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCCCHHHH
ISGQLRTAAGNLQIEFMRNLMNSFVLSSASVILALLLGVPAAYAFARFKFKLGETIAFTL
HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFRFAPPLLVLLPLSLYYQQLGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA
HHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]