| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341667
Identifier: 146341667
GI number: 146341667
Start: 4964787
End: 4965905
Strand: Reverse
Name: 146341667
Synonym: BRADO4772
Alternate gene names: NA
Gene position: 4965905-4964787 (Counterclockwise)
Preceding gene: 146341668
Following gene: 146341666
Centisome position: 66.6
GC content: 71.22
Gene sequence:
>1119_bases ATGAGCGAGCTCCGCCTGCCGCAGCCTGCAGAGATCTTCGTCACCTTCGCGGCCTTGCTGCGGCGGAACGGCTTTGCCGT CGCGCCCGAGCAGACGACGGCCTTTCTTGCCGCCATCGAGCTGCTTGGCCCGACAAGCCTCGATGACATCCGCCGCGCCG GCGCAGCAATGCTGGCGCCGCCGCCCGAGCGGCTTGCGACCTACAATCTGCTATTCGACATCCACTTCGGTGTGAGCGAG CCGTCGGCCCTCGGCGAGTCCGACCAGCAGGATGACGTCGTGCGGCTGCAGGAGGAAGGCGAGGGCGCCGTCGATCCCGA TCTTGCCCAGGAGCAGAACGAGTCCGGGATGGCGGCGACCCGTGCCGAGGCTCTGGTCGCGCGCCGCCTCGGTGTCGCGA CCGGCCGCAATGCTTTGCAGCAGCTCGCCCGTCAGGCGCGCGCGAAACTGCCGAAGCGGCGCGGCCACCGGCGCATGCGC GCCCGGCGCGGCAGTTTCGTCGACCTGCGCCGCACCTTGCGCGAGAGCGTGCGCCGCGACGGCGAGGTGCTGACGTTGCG CCGCCTGAAGCGGCGGCCGCGCCTGCGCCGCCTGCTGGTGCTGATCGACGTGTCCGGCTCGATGAAGGCGCGCACCGAGG ACAATATGCGGCTGGCGCATGTGCTGGTGCAGGCGATCCCGCAAGTCGAGGTGTTCACGCTGGGCACGCGGCTGACGCGC GTCACGCGGCAGCTGCGGCTGAAGCGGCGCGAGCAGGCGCTGCGCGCCGCCTCGCATCTCGTCAGCGACTGGGACGGCGG CACGCGGATCGGCGAGGCGCTGCAGGCCTTTCTCTCGGTGCCGCGCTTCTCGACCTATGCGCGCGGCGCCGCCGTGCTGG TGATCTCCGACGGGCTGGAGCGCGGCGACCACCAGGCGCTTGGCGAGGCCGTCTGGAAGCTGTCGCTGCGCGCCTGGCGC CTGAGCTGGCTGACGCCGCTGGCGACAGGCCCAGGCTTCAAGCCGCAGACGGAGGCGCTGCAGGCGATCGCGCCGTTCGT TGACGACATCGTTCCCGGCGGCTCCGACGAGGCCATCGTCGCGCATGTTCTGTCACTCGGGCAGAGGAGGGCGGCATGA
Upstream 100 bases:
>100_bases CGGATGCCTTCAGGCGCTCGATTGGCGTCGCGCTGAAGGACGAGGAGGACCTGTCCTTCGTGGCGCCGCGGCTGGATGCA TTGCTGGCGGAGGCGATGAC
Downstream 100 bases:
>100_bases CCGGATATGTCGATGCGCATCATCACATCTGGCGCCAGGCCGATCTGCCCTGGCTGGTCGGACCGATGCAGCCGCGGATC TTCGGACCCTACGAGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; VWA Domain Containing CoxE-Like Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; CoxE Protein; Von Willebrand Factor Type A Domain-Containing Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSELRLPQPAEIFVTFAALLRRNGFAVAPEQTTAFLAAIELLGPTSLDDIRRAGAAMLAPPPERLATYNLLFDIHFGVSE PSALGESDQQDDVVRLQEEGEGAVDPDLAQEQNESGMAATRAEALVARRLGVATGRNALQQLARQARAKLPKRRGHRRMR ARRGSFVDLRRTLRESVRRDGEVLTLRRLKRRPRLRRLLVLIDVSGSMKARTEDNMRLAHVLVQAIPQVEVFTLGTRLTR VTRQLRLKRREQALRAASHLVSDWDGGTRIGEALQAFLSVPRFSTYARGAAVLVISDGLERGDHQALGEAVWKLSLRAWR LSWLTPLATGPGFKPQTEALQAIAPFVDDIVPGGSDEAIVAHVLSLGQRRAA
Sequences:
>Translated_372_residues MSELRLPQPAEIFVTFAALLRRNGFAVAPEQTTAFLAAIELLGPTSLDDIRRAGAAMLAPPPERLATYNLLFDIHFGVSE PSALGESDQQDDVVRLQEEGEGAVDPDLAQEQNESGMAATRAEALVARRLGVATGRNALQQLARQARAKLPKRRGHRRMR ARRGSFVDLRRTLRESVRRDGEVLTLRRLKRRPRLRRLLVLIDVSGSMKARTEDNMRLAHVLVQAIPQVEVFTLGTRLTR VTRQLRLKRREQALRAASHLVSDWDGGTRIGEALQAFLSVPRFSTYARGAAVLVISDGLERGDHQALGEAVWKLSLRAWR LSWLTPLATGPGFKPQTEALQAIAPFVDDIVPGGSDEAIVAHVLSLGQRRAA >Mature_371_residues SELRLPQPAEIFVTFAALLRRNGFAVAPEQTTAFLAAIELLGPTSLDDIRRAGAAMLAPPPERLATYNLLFDIHFGVSEP SALGESDQQDDVVRLQEEGEGAVDPDLAQEQNESGMAATRAEALVARRLGVATGRNALQQLARQARAKLPKRRGHRRMRA RRGSFVDLRRTLRESVRRDGEVLTLRRLKRRPRLRRLLVLIDVSGSMKARTEDNMRLAHVLVQAIPQVEVFTLGTRLTRV TRQLRLKRREQALRAASHLVSDWDGGTRIGEALQAFLSVPRFSTYARGAAVLVISDGLERGDHQALGEAVWKLSLRAWRL SWLTPLATGPGFKPQTEALQAIAPFVDDIVPGGSDEAIVAHVLSLGQRRAA
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41104; Mature: 40973
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELRLPQPAEIFVTFAALLRRNGFAVAPEQTTAFLAAIELLGPTSLDDIRRAGAAMLAP CCCCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC PPERLATYNLLFDIHFGVSEPSALGESDQQDDVVRLQEEGEGAVDPDLAQEQNESGMAAT CHHHHHHHHEEEEEECCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCHHH RAEALVARRLGVATGRNALQQLARQARAKLPKRRGHRRMRARRGSFVDLRRTLRESVRRD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC GEVLTLRRLKRRPRLRRLLVLIDVSGSMKARTEDNMRLAHVLVQAIPQVEVFTLGTRLTR CCCHHHHHHHHCHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHH VTRQLRLKRREQALRAASHLVSDWDGGTRIGEALQAFLSVPRFSTYARGAAVLVISDGLE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCC RGDHQALGEAVWKLSLRAWRLSWLTPLATGPGFKPQTEALQAIAPFVDDIVPGGSDEAIV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH AHVLSLGQRRAA HHHHHHHHHCCC >Mature Secondary Structure SELRLPQPAEIFVTFAALLRRNGFAVAPEQTTAFLAAIELLGPTSLDDIRRAGAAMLAP CCCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC PPERLATYNLLFDIHFGVSEPSALGESDQQDDVVRLQEEGEGAVDPDLAQEQNESGMAAT CHHHHHHHHEEEEEECCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCHHH RAEALVARRLGVATGRNALQQLARQARAKLPKRRGHRRMRARRGSFVDLRRTLRESVRRD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC GEVLTLRRLKRRPRLRRLLVLIDVSGSMKARTEDNMRLAHVLVQAIPQVEVFTLGTRLTR CCCHHHHHHHHCHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHH VTRQLRLKRREQALRAASHLVSDWDGGTRIGEALQAFLSVPRFSTYARGAAVLVISDGLE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCC RGDHQALGEAVWKLSLRAWRLSWLTPLATGPGFKPQTEALQAIAPFVDDIVPGGSDEAIV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH AHVLSLGQRRAA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA