Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146341630

Identifier: 146341630

GI number: 146341630

Start: 4922630

End: 4923718

Strand: Reverse

Name: 146341630

Synonym: BRADO4733

Alternate gene names: NA

Gene position: 4923718-4922630 (Counterclockwise)

Preceding gene: 146341631

Following gene: 146341626

Centisome position: 66.03

GC content: 64.1

Gene sequence:

>1089_bases
ATGAAGCGGAGAGACTTCATCAAGGTCACCGGGCTCGGCGCGGCCGGCGCCGCCGCGATCGCAGCACCCGCGATCGCGCA
ATCGATGCCCGAGATCAAATGGCGCATGACCACGAGCTGGCCGAAGACACTCGATACGTTGCACGGCGGCGCCGAGATGA
TGGCCAAGATGGTCGGCGAGGCCACCGACAACAAATTCCAGATCCAGACCTTCGCCGCCGGCGAGATCGTGCCCGGCCTG
CAGGTGCTCGACGCCGTGCAGAACGGCACCGTCGAAATGGGCCACACCGCGTCCTACTACTACTTCGGCAAGGACCCGAC
CTTCACCTTCGGCTCCTCGGTCCCCTTCGGTCCGAACATGCGCATCAACCAGGCCTGGTACCTGATGGGCGGCGGCAAGG
AGATCCTCAACGAGTTCTACAAGAGCTACAACGTCACCTCGCTGCTGGCCGGTAACACCGGCTGCCAGATGGGCGGCTGG
TTCCGCAAGGAGGTCAACAGCGTCGACGATCTCAACGGCCTGAAATTCCGCATCGGCGGCTTTGCCGGCCGCGTGATGCA
GAAGCTCGGCTGCGTGCCGCAGCAGCTCGCCGGCGGCGACATCTACCCGGCGCTGGAGAAGGGCACGATCGACGCCGCCG
AATGGGTGGGACCGTATGACGACGAGAAGCTCGGCCTGTTCAAGGTCGCGCCGCACTACTACTTCCCTGGCTGGTGGGAG
GGCGGGCCGATGCTGCTCGCGATGATCAACCTGGAGAAGTGGAACGCGCTGCCAAAACACTATCAGAAGCTTCTCGAGCA
GGCCGGCCACTTCGCCAACAACTGGATGATGGCGAAGTACGATTCCGCCAACCCGCTGGCGCTGCGCAAGCTGATCGCCG
GCGGCGCCAAGCTGCATCCATTCCCGGCGCCGGTGATGGAGGCCTCGTTCAAGGCGGCCAAGGAGCTGCACGCCGAGGTC
GCCGCCACCAATCCCAACTTCAAAAAGGCGCTGGAGTCGCTGACCGCCTATTCCGGCGCCGGCTATTCCTGGTTCCAGGT
CGCCGAGGTCGGCTACGACAACTTCATGGCAAGGCGCTCACAGAGCTGA

Upstream 100 bases:

>100_bases
AATGGCACTTCCGCGCAGTTTGATCCACACTGGAACCGCAGGCCTCAGAAGAAGGCCGCCCTTAAGGAAACGAACACATC
ACCCGAGAGAGGGAAGGACT

Downstream 100 bases:

>100_bases
GACGATGGGCGGCGCGCGCGGCGTGCCGGCCGATCATCTCGCGTCGGCGTCCGCCGTTCGCAGGCCATCGCGGCGGCCGT
CGCTCATCACGCAGTCGCGC

Product: putative periplasmic mannitol-binding protein Trap-T transport system, dctP subunit

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKRRDFIKVTGLGAAGAAAIAAPAIAQSMPEIKWRMTTSWPKTLDTLHGGAEMMAKMVGEATDNKFQIQTFAAGEIVPGL
QVLDAVQNGTVEMGHTASYYYFGKDPTFTFGSSVPFGPNMRINQAWYLMGGGKEILNEFYKSYNVTSLLAGNTGCQMGGW
FRKEVNSVDDLNGLKFRIGGFAGRVMQKLGCVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLFKVAPHYYFPGWWE
GGPMLLAMINLEKWNALPKHYQKLLEQAGHFANNWMMAKYDSANPLALRKLIAGGAKLHPFPAPVMEASFKAAKELHAEV
AATNPNFKKALESLTAYSGAGYSWFQVAEVGYDNFMARRSQS

Sequences:

>Translated_362_residues
MKRRDFIKVTGLGAAGAAAIAAPAIAQSMPEIKWRMTTSWPKTLDTLHGGAEMMAKMVGEATDNKFQIQTFAAGEIVPGL
QVLDAVQNGTVEMGHTASYYYFGKDPTFTFGSSVPFGPNMRINQAWYLMGGGKEILNEFYKSYNVTSLLAGNTGCQMGGW
FRKEVNSVDDLNGLKFRIGGFAGRVMQKLGCVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLFKVAPHYYFPGWWE
GGPMLLAMINLEKWNALPKHYQKLLEQAGHFANNWMMAKYDSANPLALRKLIAGGAKLHPFPAPVMEASFKAAKELHAEV
AATNPNFKKALESLTAYSGAGYSWFQVAEVGYDNFMARRSQS
>Mature_362_residues
MKRRDFIKVTGLGAAGAAAIAAPAIAQSMPEIKWRMTTSWPKTLDTLHGGAEMMAKMVGEATDNKFQIQTFAAGEIVPGL
QVLDAVQNGTVEMGHTASYYYFGKDPTFTFGSSVPFGPNMRINQAWYLMGGGKEILNEFYKSYNVTSLLAGNTGCQMGGW
FRKEVNSVDDLNGLKFRIGGFAGRVMQKLGCVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLFKVAPHYYFPGWWE
GGPMLLAMINLEKWNALPKHYQKLLEQAGHFANNWMMAKYDSANPLALRKLIAGGAKLHPFPAPVMEASFKAAKELHAEV
AATNPNFKKALESLTAYSGAGYSWFQVAEVGYDNFMARRSQS

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39700; Mature: 39700

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRDFIKVTGLGAAGAAAIAAPAIAQSMPEIKWRMTTSWPKTLDTLHGGAEMMAKMVGE
CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHC
ATDNKFQIQTFAAGEIVPGLQVLDAVQNGTVEMGHTASYYYFGKDPTFTFGSSVPFGPNM
CCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEECCCEEEEEECCCCCEECCCCCCCCCCC
RINQAWYLMGGGKEILNEFYKSYNVTSLLAGNTGCQMGGWFRKEVNSVDDLNGLKFRIGG
EECCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEECH
FAGRVMQKLGCVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLFKVAPHYYFPGWWE
HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCEEC
GGPMLLAMINLEKWNALPKHYQKLLEQAGHFANNWMMAKYDSANPLALRKLIAGGAKLHP
CCCEEEEEEEHHHHCCCHHHHHHHHHHCCCHHCCCEEEEECCCCHHHHHHHHHCCCCCCC
FPAPVMEASFKAAKELHAEVAATNPNFKKALESLTAYSGAGYSWFQVAEVGYDNFMARRS
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHCC
QS
CC
>Mature Secondary Structure
MKRRDFIKVTGLGAAGAAAIAAPAIAQSMPEIKWRMTTSWPKTLDTLHGGAEMMAKMVGE
CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHC
ATDNKFQIQTFAAGEIVPGLQVLDAVQNGTVEMGHTASYYYFGKDPTFTFGSSVPFGPNM
CCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEECCCEEEEEECCCCCEECCCCCCCCCCC
RINQAWYLMGGGKEILNEFYKSYNVTSLLAGNTGCQMGGWFRKEVNSVDDLNGLKFRIGG
EECCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEECH
FAGRVMQKLGCVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLFKVAPHYYFPGWWE
HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCEEC
GGPMLLAMINLEKWNALPKHYQKLLEQAGHFANNWMMAKYDSANPLALRKLIAGGAKLHP
CCCEEEEEEEHHHHCCCHHHHHHHHHHCCCHHCCCEEEEECCCCHHHHHHHHHCCCCCCC
FPAPVMEASFKAAKELHAEVAATNPNFKKALESLTAYSGAGYSWFQVAEVGYDNFMARRS
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHCC
QS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA