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The map label for this gene is psd [H]

Identifier: 146341591

GI number: 146341591

Start: 4882981

End: 4883679

Strand: Reverse

Name: psd [H]

Synonym: BRADO4692

Alternate gene names: 146341591

Gene position: 4883679-4882981 (Counterclockwise)

Preceding gene: 146341592

Following gene: 146341590

Centisome position: 65.49

GC content: 66.52

Gene sequence:

>699_bases
ATGTCGATCAGCAATTCCATCCGTGCTCAGATCCCGCCGATCCATCCCGAGGGCTATCCGTTCATCGGCGCCTTTGCCCT
GGTCAGCCTGATCCTGTTCTGGATCTTCGCCCCGCTCGGCTGGATCGGCACTTTGCTCACCGTGTGGTGCGCGCTGTTCT
TCCGCGACCCGATCCGGGTGACGCCGCAGCGGGAGGGGCTGGTGGTGGCGCCGGCCGACGGCCGCATCTCGATGATCACC
CGCGCCTTGCCGCCGGCCGAGCTTGGCCTCGGCGACCGGCCGCTGTTGCGCGTCTCGATCTTCATGAGCGTCTTCAACGT
CCACGTGAACCGCAGCCCGGTGGCGGGGCGGATCGAGAAGATCGCCTACCGTCCGGGCGCCTTCATCAATGCCGAACTCG
ACAAGGCGAGTGAGGACAATGAGCGCAATTCGCTCGCGATCTCGACACCGCACGGCAAGATCGGCGTTGTCCAGATCGCT
GGCCTCGTGGCGCGCCGGATCGTGTCGTTCGTCCGCGAGGGCCAGACCGTGGGGGCTGGGGAGCGGTTCGGACTGATCCG
CTTCGGTTCGCGGCTCGACGTTTATTTCCCAGACGGCACCGAGGTTCTGGTCTCCGAGGGGCAGACCGCGATCGCGGGCG
AGACGGTCCTGGCCGATTTCGACGTCGCCGTGCCGGGCCTGACGTTCCGGAGCCAGTGA

Upstream 100 bases:

>100_bases
GACTCGTTAAGGATTCATTTTGACCTTCGCCGCGCAGCGACCTAGTCAAGGCGGCGGTCCGCTCTGAGGTCAGAGGGACA
CCATCTCAACGAAGCAGGCC

Downstream 100 bases:

>100_bases
ACCCCCGTCGGTCCGGGATGACCCATTAACGGGACTTTGGGTCCGGATCCGGCACAAGGTCCAGTGCAACCCCCGTGGTG
TGATCATGAGCTTCGATCCG

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSISNSIRAQIPPIHPEGYPFIGAFALVSLILFWIFAPLGWIGTLLTVWCALFFRDPIRVTPQREGLVVAPADGRISMIT
RALPPAELGLGDRPLLRVSIFMSVFNVHVNRSPVAGRIEKIAYRPGAFINAELDKASEDNERNSLAISTPHGKIGVVQIA
GLVARRIVSFVREGQTVGAGERFGLIRFGSRLDVYFPDGTEVLVSEGQTAIAGETVLADFDVAVPGLTFRSQ

Sequences:

>Translated_232_residues
MSISNSIRAQIPPIHPEGYPFIGAFALVSLILFWIFAPLGWIGTLLTVWCALFFRDPIRVTPQREGLVVAPADGRISMIT
RALPPAELGLGDRPLLRVSIFMSVFNVHVNRSPVAGRIEKIAYRPGAFINAELDKASEDNERNSLAISTPHGKIGVVQIA
GLVARRIVSFVREGQTVGAGERFGLIRFGSRLDVYFPDGTEVLVSEGQTAIAGETVLADFDVAVPGLTFRSQ
>Mature_231_residues
SISNSIRAQIPPIHPEGYPFIGAFALVSLILFWIFAPLGWIGTLLTVWCALFFRDPIRVTPQREGLVVAPADGRISMITR
ALPPAELGLGDRPLLRVSIFMSVFNVHVNRSPVAGRIEKIAYRPGAFINAELDKASEDNERNSLAISTPHGKIGVVQIAG
LVARRIVSFVREGQTVGAGERFGLIRFGSRLDVYFPDGTEVLVSEGQTAIAGETVLADFDVAVPGLTFRSQ

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 25197; Mature: 25065

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISNSIRAQIPPIHPEGYPFIGAFALVSLILFWIFAPLGWIGTLLTVWCALFFRDPIRV
CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TPQREGLVVAPADGRISMITRALPPAELGLGDRPLLRVSIFMSVFNVHVNRSPVAGRIEK
CCCCCCEEEECCCCCHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
IAYRPGAFINAELDKASEDNERNSLAISTPHGKIGVVQIAGLVARRIVSFVREGQTVGAG
HHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
ERFGLIRFGSRLDVYFPDGTEVLVSEGQTAIAGETVLADFDVAVPGLTFRSQ
CCEEEEEECCEEEEEECCCCEEEEECCCEEECCCEEEEECCCCCCCEEECCC
>Mature Secondary Structure 
SISNSIRAQIPPIHPEGYPFIGAFALVSLILFWIFAPLGWIGTLLTVWCALFFRDPIRV
CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TPQREGLVVAPADGRISMITRALPPAELGLGDRPLLRVSIFMSVFNVHVNRSPVAGRIEK
CCCCCCEEEECCCCCHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
IAYRPGAFINAELDKASEDNERNSLAISTPHGKIGVVQIAGLVARRIVSFVREGQTVGAG
HHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
ERFGLIRFGSRLDVYFPDGTEVLVSEGQTAIAGETVLADFDVAVPGLTFRSQ
CCEEEEEECCEEEEEECCCCEEEEECCCEEECCCEEEEECCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA