| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is pssA [H]
Identifier: 146341590
GI number: 146341590
Start: 4882005
End: 4882895
Strand: Reverse
Name: pssA [H]
Synonym: BRADO4691
Alternate gene names: 146341590
Gene position: 4882895-4882005 (Counterclockwise)
Preceding gene: 146341591
Following gene: 146341589
Centisome position: 65.48
GC content: 68.35
Gene sequence:
>891_bases ATGAGCTTCGATCCGACCTCTCCCGACCTTCGTCGTCGCCGCTTCCGCCCCATCCCGGTGCGGCTGCTGGTGCCGAACAT GATCACCTTGCTGGCGATCTGCGCCGGCCTGACCGCGATCCGGCTGTCCACCGAGGGCCGGATGGAGCTCGCAGTCGCGG CCATCGTGCTCGCCGCCTTCCTGGATGGCATCGACGGCCGCATCGCCCGCATGATCAAGGGCCAGTCGAAATTCGGCGCC GAGCTCGACAGCCTCGCCGACTTCGTCAATTTCGGCGTTGCGCCCGGCCTGATGTTGTATTTCTGGCAGCTTCAGGAGCT GCGCGACGGCGGCTGGATCGCCGCGATGATGTACGCCATCAGCGGCGGGCTGCGGCTGGCGCGCTTCAACGCCAGCATCG ACGATCCCAGCAGGCCGCCGTTTGCCGCCAACTTCTTCACCGGTGTGCCGGCGCCGCTCGGTGCGATCACCGTGCTGCTG CCCGTCTATCTCGCCTTCCTCGACCTGCCCAAGCCGCCGGCGCTGGTCACCGCCTTCTACACGCTGCTGATCGCGTTCCT GATGGTCTCGCGGTTGCCTGTCTTCTCCGGCAAGACCACGCGGATGCGCGTCTCGCCCGAGCTCGTGCTGCCGGTGTTCG CGGCGGTCGTGTTCTTCGTCGCGCTGATCGTGGTCTACCCCTGGCACATCCTGTCGGCGGTCTCGATCCTGTACATGGTG AGCCTGCCGTTTGGCTGGCGGCTGTACCGCCAGCAGGCGGCGAAGCACGCCGCGACGCTCGCCGGTGCCGCCGCTGCTCC GCAGTCACCATCATCCGCGACGCCAACCTTCGCGCCGGCTGCCGCGCCGCCGGCCGAGCAGGACCAGCGGCCGCCTGAGC GGCTGCACTGA
Upstream 100 bases:
>100_bases TTCCGGAGCCAGTGAACCCCCGTCGGTCCGGGATGACCCATTAACGGGACTTTGGGTCCGGATCCGGCACAAGGTCCAGT GCAACCCCCGTGGTGTGATC
Downstream 100 bases:
>100_bases GCGCAAGGCGGTCAGCCCGGCCTGAAGCTTTGCCGCGTCGAGAGCGTCGGCTATACCGGATGCAAGGACGGCGATGACGT CCGTCTGAGCATCCGGAGAA
Product: phosphatidylserine synthase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSFDPTSPDLRRRRFRPIPVRLLVPNMITLLAICAGLTAIRLSTEGRMELAVAAIVLAAFLDGIDGRIARMIKGQSKFGA ELDSLADFVNFGVAPGLMLYFWQLQELRDGGWIAAMMYAISGGLRLARFNASIDDPSRPPFAANFFTGVPAPLGAITVLL PVYLAFLDLPKPPALVTAFYTLLIAFLMVSRLPVFSGKTTRMRVSPELVLPVFAAVVFFVALIVVYPWHILSAVSILYMV SLPFGWRLYRQQAAKHAATLAGAAAAPQSPSSATPTFAPAAAPPAEQDQRPPERLH
Sequences:
>Translated_296_residues MSFDPTSPDLRRRRFRPIPVRLLVPNMITLLAICAGLTAIRLSTEGRMELAVAAIVLAAFLDGIDGRIARMIKGQSKFGA ELDSLADFVNFGVAPGLMLYFWQLQELRDGGWIAAMMYAISGGLRLARFNASIDDPSRPPFAANFFTGVPAPLGAITVLL PVYLAFLDLPKPPALVTAFYTLLIAFLMVSRLPVFSGKTTRMRVSPELVLPVFAAVVFFVALIVVYPWHILSAVSILYMV SLPFGWRLYRQQAAKHAATLAGAAAAPQSPSSATPTFAPAAAPPAEQDQRPPERLH >Mature_295_residues SFDPTSPDLRRRRFRPIPVRLLVPNMITLLAICAGLTAIRLSTEGRMELAVAAIVLAAFLDGIDGRIARMIKGQSKFGAE LDSLADFVNFGVAPGLMLYFWQLQELRDGGWIAAMMYAISGGLRLARFNASIDDPSRPPFAANFFTGVPAPLGAITVLLP VYLAFLDLPKPPALVTAFYTLLIAFLMVSRLPVFSGKTTRMRVSPELVLPVFAAVVFFVALIVVYPWHILSAVSILYMVS LPFGWRLYRQQAAKHAATLAGAAAAPQSPSSATPTFAPAAAPPAEQDQRPPERLH
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 32150; Mature: 32019
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDPTSPDLRRRRFRPIPVRLLVPNMITLLAICAGLTAIRLSTEGRMELAVAAIVLAAF CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHH LDGIDGRIARMIKGQSKFGAELDSLADFVNFGVAPGLMLYFWQLQELRDGGWIAAMMYAI HHCCCHHHHHHHHCCHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH SGGLRLARFNASIDDPSRPPFAANFFTGVPAPLGAITVLLPVYLAFLDLPKPPALVTAFY HCCCEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH TLLIAFLMVSRLPVFSGKTTRMRVSPELVLPVFAAVVFFVALIVVYPWHILSAVSILYMV HHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLPFGWRLYRQQAAKHAATLAGAAAAPQSPSSATPTFAPAAAPPAEQDQRPPERLH HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure SFDPTSPDLRRRRFRPIPVRLLVPNMITLLAICAGLTAIRLSTEGRMELAVAAIVLAAF CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHH LDGIDGRIARMIKGQSKFGAELDSLADFVNFGVAPGLMLYFWQLQELRDGGWIAAMMYAI HHCCCHHHHHHHHCCHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH SGGLRLARFNASIDDPSRPPFAANFFTGVPAPLGAITVLLPVYLAFLDLPKPPALVTAFY HCCCEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH TLLIAFLMVSRLPVFSGKTTRMRVSPELVLPVFAAVVFFVALIVVYPWHILSAVSILYMV HHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLPFGWRLYRQQAAKHAATLAGAAAAPQSPSSATPTFAPAAAPPAEQDQRPPERLH HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]