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The map label for this gene is bfrD [H]

Identifier: 146341555

GI number: 146341555

Start: 4840876

End: 4843323

Strand: Reverse

Name: bfrD [H]

Synonym: BRADO4653

Alternate gene names: 146341555

Gene position: 4843323-4840876 (Counterclockwise)

Preceding gene: 146341556

Following gene: 146341554

Centisome position: 64.95

GC content: 64.22

Gene sequence:

>2448_bases
ATGTTGAATAAAGATCTGGGGCGTTTGGAATACATGGGACAGGTGAGAGCACCGCGTTCGCTGCGCGAGGGCGCAGCGGT
GAGATTGATGGACGGACGGGGCGAAGGGCCCTTGGTCACCAAGGTGTCGGCGGTTGCCGGGTTGATGGCGGTGGCATCGT
TGTCGTCGGCCGAGGCGCAGCCCGTTGCTGATCTGCCGCCGGTGAACGTCGATGCGCCGGTCGCGCGCGCCAAGCCGACG
TCCTCAAAGCCGTCCGCCGAGCAGGTCCGCGCGCGCAATGCGCTGCGCCGCGCCGCGCGCCAGCAGGGCGCGCAGCAGGC
TGCGGTGGCCTTTCCCAATGCGGGTGGACTGACGGCGCCCGATGCCAACCCCTATGCGGACGCGGCCGAGCCCTACAAGG
TCAACCGCGTGCAGGCCTCGGGCAAGTTTCCCGAGCCGCTCTTGAACACGCCGAAGACGATCACCGTGATGAGCAAGGAG
GTGCTGCAGGACAAGCACGTCACGGCGCTGAAGGAGATCGGCCGCTCGACGGCCGGCGTCACGCTGGGCTCGGGCGAGGG
CGGCAACGCGTTCGGCGACCGCTTCTTCATCCGCGGCTTCGACGCCCGCAACGACGTCTTCATCGACGGCATCCGCGATC
CCGCCGTGTCGATCCGCGAGAACTTCTTCACCGAGCAGATCGAGATCCTGCGAGGCCCGGCCTCATCCTATGCCGGCCGC
GGCACCGCCGGCGGCGCCATCAACATCGTCACCAAGCAGGCCGGCGACACCAACTTCAAGCGGATGGACACCGAGTTCGG
CACCGACCAGCAGAAGCGGGTGACGCTGGACGTCAACCAGGTGGTGTCGCCGACCTTCTCGGTGCGCACCGGCGGTCTGT
TCCAGGATTCCAACGTCGCCGGGCGCAATTACGTCACCGACGATCGCTGGGGCGCATTCCTGTCGACCAAATGGACGCCG
ACAGAGGATCTCAAATTCACGACCAACTACGTCCACACCGATCTCTCCGGCTACCCGGATTTCGGCGTGCCTTATTACAA
GCAGGGCAACGTGCCGGTGACCTCGGCCGGCATTCCGCGCGGCACCTGGTACGGCTTCCTCAACCGCGACTTCCAGGCCG
CGCGGCAGGATTTCGGCACCGGAACGATGGAGTACAAGGTCAACGAAGCGATCACGCTCACCAGCAAGTTCCGTGGCGAG
CACTCCGAGCTGAACTACATCGGCACGCTGCCGCAGAACCCGAATACGACCAACCCGAACCCGCTGCTCTGGACCACGAC
GGCGAGCGCGCAGAGCCGCTTTCAGACCGTCGACGTCTGGGCCAACCAGAACGACGCCACGTTCAAGCTCGACACCTGGG
GCGTGAAGCACACCGCGGTGCTCGGCACGGAGTTCTCGAACGAGAACATCTCGATCGACCGCTATACGGGGCTGTCGTCG
GAGCTGTTCGGCGGCGGCTCGACCAGCTCGGGCGCGGTCACGGGCGTCAACATCTACTCGCCGCAATACACCAACATCCC
GTTCGGCATTACGCCGTCTCTCGTCGGAAATCCCACGCGCTACGGCGTCAACACCAACAGCGTCTACGCCATGGACACCG
CATATTGGCGCGACACGATCATCGTCAATGGCGGCGTGCGCTACGACGGCTACAATATGGGCTCGTCGAACAACACCAGC
TATCTGAAGATGAACGCTGACCTGGTGAACTACAATGTCGGCCTGGTCTACAAGCCGATGCCGATCGGCAGCATCTACGC
CGCCTATGCGACCTCGGCCAATCCGTTCGGCTCGGAGCTTGATGCGACCGGCACCGATTATGGCGGCGTGCCCGCCAACA
GCCTCATCCTGCTCGGGCCGGAGCGCAACAAGGCGGCCGAGCTCGGTACCAAATGGGAGCTGGTCGACCGCCACCTCCTG
GTGTCCGGCGCGCTGTTCCAGACCACCAAAGACAATGCCCGCGAGACGGTCAACAGCATCCTCACCTCGGGCGCGGCCTA
TCGCATCCAGGGCATCGACATCGAGGCGGAAGGCAGGCTCACCGACCGCTGGAGCATCTTCGGCGGCCTGGTGCTGATGC
AGTCCAAGGTCACGCAGAGCGGCATCGCGTCCAACATCGGGCTGCAGCTCGCCAACATCGCGCACCAGTCGTTCAGCATG
CTGTCGAAATACAAGTTCGACAATGGCTGGGAGGTCGGCGGCACGGCGGTGTACCGCTCCAAGGTCTATGGCGGCACCTT
TGCGGCCAACACGGGCAACGAGTTGCCGAGCTACTGGCGGTTCGACGCCTTCGTCGAGAAGCAGATCGACAAGAACTGGA
CGATGAAGCTGTACGCGCAGAACCTGACCAACAAGCTCTATTACGACACGCTGTATCGGAGCGCGGTGCCGTTCGTCGCC
GTCGCGCCGGGCCGCGCCTTCTACATCATCACCACCGCGAAGTTCTGA

Upstream 100 bases:

>100_bases
TCTGGAACTATTCAAGGCCAAATTAGGGCTCCTCAAATTGACCCCCTGAAACACGCCCGATACCAACGACGCATCGCACT
GCGAATGATCCGCGCGAGCG

Downstream 100 bases:

>100_bases
TCATGCTGATCTGCATCCCGGACGTGCTGTCCAAAGACGAGGTCGCTGAGTTCCGCCGCATCATGGATGCGGCGGAGTGG
GAGGATGGCCGCTCGACGGC

Product: putative outer membrane TonB-dependent receptor receptor for iron transport

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 815; Mature: 815

Protein sequence:

>815_residues
MLNKDLGRLEYMGQVRAPRSLREGAAVRLMDGRGEGPLVTKVSAVAGLMAVASLSSAEAQPVADLPPVNVDAPVARAKPT
SSKPSAEQVRARNALRRAARQQGAQQAAVAFPNAGGLTAPDANPYADAAEPYKVNRVQASGKFPEPLLNTPKTITVMSKE
VLQDKHVTALKEIGRSTAGVTLGSGEGGNAFGDRFFIRGFDARNDVFIDGIRDPAVSIRENFFTEQIEILRGPASSYAGR
GTAGGAINIVTKQAGDTNFKRMDTEFGTDQQKRVTLDVNQVVSPTFSVRTGGLFQDSNVAGRNYVTDDRWGAFLSTKWTP
TEDLKFTTNYVHTDLSGYPDFGVPYYKQGNVPVTSAGIPRGTWYGFLNRDFQAARQDFGTGTMEYKVNEAITLTSKFRGE
HSELNYIGTLPQNPNTTNPNPLLWTTTASAQSRFQTVDVWANQNDATFKLDTWGVKHTAVLGTEFSNENISIDRYTGLSS
ELFGGGSTSSGAVTGVNIYSPQYTNIPFGITPSLVGNPTRYGVNTNSVYAMDTAYWRDTIIVNGGVRYDGYNMGSSNNTS
YLKMNADLVNYNVGLVYKPMPIGSIYAAYATSANPFGSELDATGTDYGGVPANSLILLGPERNKAAELGTKWELVDRHLL
VSGALFQTTKDNARETVNSILTSGAAYRIQGIDIEAEGRLTDRWSIFGGLVLMQSKVTQSGIASNIGLQLANIAHQSFSM
LSKYKFDNGWEVGGTAVYRSKVYGGTFAANTGNELPSYWRFDAFVEKQIDKNWTMKLYAQNLTNKLYYDTLYRSAVPFVA
VAPGRAFYIITTAKF

Sequences:

>Translated_815_residues
MLNKDLGRLEYMGQVRAPRSLREGAAVRLMDGRGEGPLVTKVSAVAGLMAVASLSSAEAQPVADLPPVNVDAPVARAKPT
SSKPSAEQVRARNALRRAARQQGAQQAAVAFPNAGGLTAPDANPYADAAEPYKVNRVQASGKFPEPLLNTPKTITVMSKE
VLQDKHVTALKEIGRSTAGVTLGSGEGGNAFGDRFFIRGFDARNDVFIDGIRDPAVSIRENFFTEQIEILRGPASSYAGR
GTAGGAINIVTKQAGDTNFKRMDTEFGTDQQKRVTLDVNQVVSPTFSVRTGGLFQDSNVAGRNYVTDDRWGAFLSTKWTP
TEDLKFTTNYVHTDLSGYPDFGVPYYKQGNVPVTSAGIPRGTWYGFLNRDFQAARQDFGTGTMEYKVNEAITLTSKFRGE
HSELNYIGTLPQNPNTTNPNPLLWTTTASAQSRFQTVDVWANQNDATFKLDTWGVKHTAVLGTEFSNENISIDRYTGLSS
ELFGGGSTSSGAVTGVNIYSPQYTNIPFGITPSLVGNPTRYGVNTNSVYAMDTAYWRDTIIVNGGVRYDGYNMGSSNNTS
YLKMNADLVNYNVGLVYKPMPIGSIYAAYATSANPFGSELDATGTDYGGVPANSLILLGPERNKAAELGTKWELVDRHLL
VSGALFQTTKDNARETVNSILTSGAAYRIQGIDIEAEGRLTDRWSIFGGLVLMQSKVTQSGIASNIGLQLANIAHQSFSM
LSKYKFDNGWEVGGTAVYRSKVYGGTFAANTGNELPSYWRFDAFVEKQIDKNWTMKLYAQNLTNKLYYDTLYRSAVPFVA
VAPGRAFYIITTAKF
>Mature_815_residues
MLNKDLGRLEYMGQVRAPRSLREGAAVRLMDGRGEGPLVTKVSAVAGLMAVASLSSAEAQPVADLPPVNVDAPVARAKPT
SSKPSAEQVRARNALRRAARQQGAQQAAVAFPNAGGLTAPDANPYADAAEPYKVNRVQASGKFPEPLLNTPKTITVMSKE
VLQDKHVTALKEIGRSTAGVTLGSGEGGNAFGDRFFIRGFDARNDVFIDGIRDPAVSIRENFFTEQIEILRGPASSYAGR
GTAGGAINIVTKQAGDTNFKRMDTEFGTDQQKRVTLDVNQVVSPTFSVRTGGLFQDSNVAGRNYVTDDRWGAFLSTKWTP
TEDLKFTTNYVHTDLSGYPDFGVPYYKQGNVPVTSAGIPRGTWYGFLNRDFQAARQDFGTGTMEYKVNEAITLTSKFRGE
HSELNYIGTLPQNPNTTNPNPLLWTTTASAQSRFQTVDVWANQNDATFKLDTWGVKHTAVLGTEFSNENISIDRYTGLSS
ELFGGGSTSSGAVTGVNIYSPQYTNIPFGITPSLVGNPTRYGVNTNSVYAMDTAYWRDTIIVNGGVRYDGYNMGSSNNTS
YLKMNADLVNYNVGLVYKPMPIGSIYAAYATSANPFGSELDATGTDYGGVPANSLILLGPERNKAAELGTKWELVDRHLL
VSGALFQTTKDNARETVNSILTSGAAYRIQGIDIEAEGRLTDRWSIFGGLVLMQSKVTQSGIASNIGLQLANIAHQSFSM
LSKYKFDNGWEVGGTAVYRSKVYGGTFAANTGNELPSYWRFDAFVEKQIDKNWTMKLYAQNLTNKLYYDTLYRSAVPFVA
VAPGRAFYIITTAKF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=733, Percent_Identity=26.0572987721692, Blast_Score=216, Evalue=6e-57,
Organism=Escherichia coli, GI1786344, Length=706, Percent_Identity=22.6628895184136, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1787344, Length=755, Percent_Identity=22.5165562913907, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 88550; Mature: 88550

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKDLGRLEYMGQVRAPRSLREGAAVRLMDGRGEGPLVTKVSAVAGLMAVASLSSAEAQ
CCCCCCCHHHHHHHCCCCHHHHCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCC
PVADLPPVNVDAPVARAKPTSSKPSAEQVRARNALRRAARQQGAQQAAVAFPNAGGLTAP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
DANPYADAAEPYKVNRVQASGKFPEPLLNTPKTITVMSKEVLQDKHVTALKEIGRSTAGV
CCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCE
TLGSGEGGNAFGDRFFIRGFDARNDVFIDGIRDPAVSIRENFFTEQIEILRGPASSYAGR
EEECCCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCCCC
GTAGGAINIVTKQAGDTNFKRMDTEFGTDQQKRVTLDVNQVVSPTFSVRTGGLFQDSNVA
CCCCCEEEEEEECCCCCCHHEECCCCCCCCCEEEEEEHHHHCCCCEEEECCCEEECCCCC
GRNYVTDDRWGAFLSTKWTPTEDLKFTTNYVHTDLSGYPDFGVPYYKQGNVPVTSAGIPR
CCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEECCCEEEECCCCCC
GTWYGFLNRDFQAARQDFGTGTMEYKVNEAITLTSKFRGEHSELNYIGTLPQNPNTTNPN
CCEEECCCCCHHHHHHHCCCCEEEEEECCEEEEEHHHCCCCCCCCEEECCCCCCCCCCCC
PLLWTTTASAQSRFQTVDVWANQNDATFKLDTWGVKHTAVLGTEFSNENISIDRYTGLSS
CEEEEEECCHHHCEEEEEEEECCCCCEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCH
ELFGGGSTSSGAVTGVNIYSPQYTNIPFGITPSLVGNPTRYGVNTNSVYAMDTAYWRDTI
HHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEECCCCCCEEEEECCEEEEEE
IVNGGVRYDGYNMGSSNNTSYLKMNADLVNYNVGLVYKPMPIGSIYAAYATSANPFGSEL
EEECCEEECCEECCCCCCCEEEEEECEEEEECEEEEEECCCCCHHHEEHCCCCCCCCCCC
DATGTDYGGVPANSLILLGPERNKAAELGTKWELVDRHLLVSGALFQTTKDNARETVNSI
CCCCCCCCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHEECCEEEECCCHHHHHHHHHH
LTSGAAYRIQGIDIEAEGRLTDRWSIFGGLVLMQSKVTQSGIASNIGLQLANIAHQSFSM
HHCCCEEEEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH
LSKYKFDNGWEVGGTAVYRSKVYGGTFAANTGNELPSYWRFDAFVEKQIDKNWTMKLYAQ
HHHHCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEH
NLTNKLYYDTLYRSAVPFVAVAPGRAFYIITTAKF
HHCCHHHHHHHHHHCCCEEEECCCCEEEEEEECCC
>Mature Secondary Structure
MLNKDLGRLEYMGQVRAPRSLREGAAVRLMDGRGEGPLVTKVSAVAGLMAVASLSSAEAQ
CCCCCCCHHHHHHHCCCCHHHHCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCC
PVADLPPVNVDAPVARAKPTSSKPSAEQVRARNALRRAARQQGAQQAAVAFPNAGGLTAP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
DANPYADAAEPYKVNRVQASGKFPEPLLNTPKTITVMSKEVLQDKHVTALKEIGRSTAGV
CCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCE
TLGSGEGGNAFGDRFFIRGFDARNDVFIDGIRDPAVSIRENFFTEQIEILRGPASSYAGR
EEECCCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCCCC
GTAGGAINIVTKQAGDTNFKRMDTEFGTDQQKRVTLDVNQVVSPTFSVRTGGLFQDSNVA
CCCCCEEEEEEECCCCCCHHEECCCCCCCCCEEEEEEHHHHCCCCEEEECCCEEECCCCC
GRNYVTDDRWGAFLSTKWTPTEDLKFTTNYVHTDLSGYPDFGVPYYKQGNVPVTSAGIPR
CCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEECCCEEEECCCCCC
GTWYGFLNRDFQAARQDFGTGTMEYKVNEAITLTSKFRGEHSELNYIGTLPQNPNTTNPN
CCEEECCCCCHHHHHHHCCCCEEEEEECCEEEEEHHHCCCCCCCCEEECCCCCCCCCCCC
PLLWTTTASAQSRFQTVDVWANQNDATFKLDTWGVKHTAVLGTEFSNENISIDRYTGLSS
CEEEEEECCHHHCEEEEEEEECCCCCEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCH
ELFGGGSTSSGAVTGVNIYSPQYTNIPFGITPSLVGNPTRYGVNTNSVYAMDTAYWRDTI
HHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEECCCCCCEEEEECCEEEEEE
IVNGGVRYDGYNMGSSNNTSYLKMNADLVNYNVGLVYKPMPIGSIYAAYATSANPFGSEL
EEECCEEECCEECCCCCCCEEEEEECEEEEECEEEEEECCCCCHHHEEHCCCCCCCCCCC
DATGTDYGGVPANSLILLGPERNKAAELGTKWELVDRHLLVSGALFQTTKDNARETVNSI
CCCCCCCCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHEECCEEEECCCHHHHHHHHHH
LTSGAAYRIQGIDIEAEGRLTDRWSIFGGLVLMQSKVTQSGIASNIGLQLANIAHQSFSM
HHCCCEEEEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH
LSKYKFDNGWEVGGTAVYRSKVYGGTFAANTGNELPSYWRFDAFVEKQIDKNWTMKLYAQ
HHHHCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEH
NLTNKLYYDTLYRSAVPFVAVAPGRAFYIITTAKF
HHCCHHHHHHHHHHCCCEEEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]