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The map label for this gene is ybiX [C]

Identifier: 146341554

GI number: 146341554

Start: 4840184

End: 4840873

Strand: Reverse

Name: ybiX [C]

Synonym: BRADO4652

Alternate gene names: 146341554

Gene position: 4840873-4840184 (Counterclockwise)

Preceding gene: 146341555

Following gene: 146341553

Centisome position: 64.92

GC content: 63.91

Gene sequence:

>690_bases
ATGCTGATCTGCATCCCGGACGTGCTGTCCAAAGACGAGGTCGCTGAGTTCCGCCGCATCATGGATGCGGCGGAGTGGGA
GGATGGCCGCTCGACGGCCGGGGCGCAGTCGGCCATGGTCAAGCGCAACGAGCAATTGCCCCCGGACGGCGAGGCGGCGC
GGCTGCTGGGCCAGCGTGTCATCACGGCGCTGACCAAGAATCCGCGCTTCCTCTCGGCGGCGATCCCGCTGCAGATCTTT
CCGCCGCTGTTCAACCGCTACACGTCCTCGCGCGGCGACCATTTCGGCATCCATGTCGACAACGCCGTGCGCGGCGATCC
GCTGACGGGACTGCGGATCCGCACCGATCTGTCGATGACGCTCTTCCTCGCCGAGCCGGACACGTATGACGGTGGCGAGC
TTGTGATCGAGGACACCTACGGCTCCCACGAAGTCAAGTTGCCGGCGGGGCATGCCGTGCTGTATCCGTCATCGAGCCTT
CACATGGTCACGCCGGTCACGCGCGGGGCCCGGGTCGCCTCTTTTTTCTGGATGCAGAGCATGATACGGGATGCCCATGT
CCGGAGCATGATCTTCGATCTGGACACCACGATCCAGAGTTTGACGGAACGCTTCGGGAGGGACGATCCCGATGCGGTCA
AGCTGACCGGCATCTATCACAATCTGATCCGGCAATGGGCCGAGGTCTAG

Upstream 100 bases:

>100_bases
ACAAGCTCTATTACGACACGCTGTATCGGAGCGCGGTGCCGTTCGTCGCCGTCGCGCCGGGCCGCGCCTTCTACATCATC
ACCACCGCGAAGTTCTGATC

Downstream 100 bases:

>100_bases
TGGCCTGAGACTTTCCAGTGAGCCGAGATATGATGACATCGCTCTTTGCCAGGCTTGCAATCGTCCTGTCATTCGCAATC
GTTTTTGCCGCGGCTCCCGC

Product: putative hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MLICIPDVLSKDEVAEFRRIMDAAEWEDGRSTAGAQSAMVKRNEQLPPDGEAARLLGQRVITALTKNPRFLSAAIPLQIF
PPLFNRYTSSRGDHFGIHVDNAVRGDPLTGLRIRTDLSMTLFLAEPDTYDGGELVIEDTYGSHEVKLPAGHAVLYPSSSL
HMVTPVTRGARVASFFWMQSMIRDAHVRSMIFDLDTTIQSLTERFGRDDPDAVKLTGIYHNLIRQWAEV

Sequences:

>Translated_229_residues
MLICIPDVLSKDEVAEFRRIMDAAEWEDGRSTAGAQSAMVKRNEQLPPDGEAARLLGQRVITALTKNPRFLSAAIPLQIF
PPLFNRYTSSRGDHFGIHVDNAVRGDPLTGLRIRTDLSMTLFLAEPDTYDGGELVIEDTYGSHEVKLPAGHAVLYPSSSL
HMVTPVTRGARVASFFWMQSMIRDAHVRSMIFDLDTTIQSLTERFGRDDPDAVKLTGIYHNLIRQWAEV
>Mature_229_residues
MLICIPDVLSKDEVAEFRRIMDAAEWEDGRSTAGAQSAMVKRNEQLPPDGEAARLLGQRVITALTKNPRFLSAAIPLQIF
PPLFNRYTSSRGDHFGIHVDNAVRGDPLTGLRIRTDLSMTLFLAEPDTYDGGELVIEDTYGSHEVKLPAGHAVLYPSSSL
HMVTPVTRGARVASFFWMQSMIRDAHVRSMIFDLDTTIQSLTERFGRDDPDAVKLTGIYHNLIRQWAEV

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain [H]

Homologues:

Organism=Escherichia coli, GI87081784, Length=229, Percent_Identity=52.8384279475983, Blast_Score=245, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005123
- InterPro:   IPR006620 [H]

Pfam domain/function: PF03171 2OG-FeII_Oxy [H]

EC number: 1.14.11.- [C]

Molecular weight: Translated: 25597; Mature: 25597

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLICIPDVLSKDEVAEFRRIMDAAEWEDGRSTAGAQSAMVKRNEQLPPDGEAARLLGQRV
CEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
ITALTKNPRFLSAAIPLQIFPPLFNRYTSSRGDHFGIHVDNAVRGDPLTGLRIRTDLSMT
HHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCEEE
LFLAEPDTYDGGELVIEDTYGSHEVKLPAGHAVLYPSSSLHMVTPVTRGARVASFFWMQS
EEEECCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHH
MIRDAHVRSMIFDLDTTIQSLTERFGRDDPDAVKLTGIYHNLIRQWAEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MLICIPDVLSKDEVAEFRRIMDAAEWEDGRSTAGAQSAMVKRNEQLPPDGEAARLLGQRV
CEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
ITALTKNPRFLSAAIPLQIFPPLFNRYTSSRGDHFGIHVDNAVRGDPLTGLRIRTDLSMT
HHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCEEE
LFLAEPDTYDGGELVIEDTYGSHEVKLPAGHAVLYPSSSLHMVTPVTRGARVASFFWMQS
EEEECCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHH
MIRDAHVRSMIFDLDTTIQSLTERFGRDDPDAVKLTGIYHNLIRQWAEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA