Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146341547

Identifier: 146341547

GI number: 146341547

Start: 4835431

End: 4836153

Strand: Reverse

Name: 146341547

Synonym: BRADO4645

Alternate gene names: NA

Gene position: 4836153-4835431 (Counterclockwise)

Preceding gene: 146341551

Following gene: 146341546

Centisome position: 64.86

GC content: 64.45

Gene sequence:

>723_bases
ATGGATCTGATTGTCTCCAGCCGGCGGCGCCGGCTGCTGCTCACCGGCATCGTCGCGGCCGTCGCCGCGCCCGCCGTGCT
CACCGCACCGACATTCGCGCAGCCGAAGCGCGCGAGGCCAAGCGAGAACAAGGAGACATCCGGCGAGGAGGTCACGCCGC
CCGAGGATCTGATGCGCGAGCACGGCGTGCTCGACCGCGTGCTGCTGCTGTACGAAGCTGGCATGCGGAAATACGCCGCC
AACCAGGACTTCGATCCGAGCCTGATCACGCAATCGGCCGGCATCATCAAGGACTTCATCCACGACTATCATGAGAAGTC
AGAGGAGCATCACGTTTTCCCGCGCTTCAAGGCGGCCGGGAAGATGACTGATCTCGTCGGCACGCTGGAGCAGCAGCACG
AGGCCGGACGCGAGGTGACGGAGACGATCTTGCGCCTTTCTCCCACCGGTCGCGACAATGCCGATGATCGCCGCCAGCTC
GTCGCGGCGATGCAGTCCTTCATCACCATGTACCGGCCGCATGCCGCGCGGGAGGATACGGAACTGTTCCCGAAGCTGAG
GGACGTCGTCTCCGCGCACGAATATGACGCGATGGCCGAGGACTTCGAGACGAAGGAGCACGAACTTTTCGGCGCCGACG
GCTTCGAGAAGATGACGGCTCGCGTCGCCGGCCTGGAGCAGCAGATGGGCATTTTCGACCTGACCCAGTTCACGCCGCGC
TGA

Upstream 100 bases:

>100_bases
GCCTGGCCAAGCATTCCCGATGCCGGCCAGCCAGGGCACCACTGGCGCTGATCGCCGTGGGACGACCGTGCAATCCGATC
GCTCGAAAGGGAGCATCCTG

Downstream 100 bases:

>100_bases
GCGGCGCAAGGTCCGCGGTCACCCGTCTGAGCATAGCCGCGCCGGCTGACTCGCCGGCCCGGAAGGCCGTGCCCGCATCT
TCCTGTCGCGTCCACCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDLIVSSRRRRLLLTGIVAAVAAPAVLTAPTFAQPKRARPSENKETSGEEVTPPEDLMREHGVLDRVLLLYEAGMRKYAA
NQDFDPSLITQSAGIIKDFIHDYHEKSEEHHVFPRFKAAGKMTDLVGTLEQQHEAGREVTETILRLSPTGRDNADDRRQL
VAAMQSFITMYRPHAAREDTELFPKLRDVVSAHEYDAMAEDFETKEHELFGADGFEKMTARVAGLEQQMGIFDLTQFTPR

Sequences:

>Translated_240_residues
MDLIVSSRRRRLLLTGIVAAVAAPAVLTAPTFAQPKRARPSENKETSGEEVTPPEDLMREHGVLDRVLLLYEAGMRKYAA
NQDFDPSLITQSAGIIKDFIHDYHEKSEEHHVFPRFKAAGKMTDLVGTLEQQHEAGREVTETILRLSPTGRDNADDRRQL
VAAMQSFITMYRPHAAREDTELFPKLRDVVSAHEYDAMAEDFETKEHELFGADGFEKMTARVAGLEQQMGIFDLTQFTPR
>Mature_240_residues
MDLIVSSRRRRLLLTGIVAAVAAPAVLTAPTFAQPKRARPSENKETSGEEVTPPEDLMREHGVLDRVLLLYEAGMRKYAA
NQDFDPSLITQSAGIIKDFIHDYHEKSEEHHVFPRFKAAGKMTDLVGTLEQQHEAGREVTETILRLSPTGRDNADDRRQL
VAAMQSFITMYRPHAAREDTELFPKLRDVVSAHEYDAMAEDFETKEHELFGADGFEKMTARVAGLEQQMGIFDLTQFTPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 27098; Mature: 27098

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIVSSRRRRLLLTGIVAAVAAPAVLTAPTFAQPKRARPSENKETSGEEVTPPEDLMRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
HGVLDRVLLLYEAGMRKYAANQDFDPSLITQSAGIIKDFIHDYHEKSEEHHVFPRFKAAG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
KMTDLVGTLEQQHEAGREVTETILRLSPTGRDNADDRRQLVAAMQSFITMYRPHAAREDT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
ELFPKLRDVVSAHEYDAMAEDFETKEHELFGADGFEKMTARVAGLEQQMGIFDLTQFTPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure
MDLIVSSRRRRLLLTGIVAAVAAPAVLTAPTFAQPKRARPSENKETSGEEVTPPEDLMRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
HGVLDRVLLLYEAGMRKYAANQDFDPSLITQSAGIIKDFIHDYHEKSEEHHVFPRFKAAG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
KMTDLVGTLEQQHEAGREVTETILRLSPTGRDNADDRRQLVAAMQSFITMYRPHAAREDT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
ELFPKLRDVVSAHEYDAMAEDFETKEHELFGADGFEKMTARVAGLEQQMGIFDLTQFTPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]