| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is sspA [C]
Identifier: 146341467
GI number: 146341467
Start: 4757133
End: 4757792
Strand: Reverse
Name: sspA [C]
Synonym: BRADO4559
Alternate gene names: 146341467
Gene position: 4757792-4757133 (Counterclockwise)
Preceding gene: 146341468
Following gene: 146341466
Centisome position: 63.81
GC content: 65.61
Gene sequence:
>660_bases ATGACGCTGACGCTGGTGATCGGCAACAAGAACTATTCCTCCTGGTCGATGCGGCCGTGGCTGGCGCTGCGCGGCTGCGA CATTCCGTTCGAGGAGATCGTGATCCCGCTCTACACCGCCGATCCGGCCGACAAGGCGCGCATCCTCGAACATTCTCCCG CCGGCAAGGTGCCGATCCTGATCGACGGCGACGTCACGGTGTGGGACTCGCTGTCCATCATCGAATATCTCGCCGAGCGC TTTCCGGCCGCCGGGCTGTGGCCGACCGACGTCGCGGCACGCGCCCTCGCGCGATCGGTCTCCGCCGAGATGCATTCCGG GTTCCAGGCGCTGCGAAACGAATGTCCGATGAACCTGCACCGCGAGATCCGGCCGGTCGAGCTGTCCGCCGACGCCAGGG CCAATGTCGCCCGGATCGAGGACATCTGGCGGGATTGCCGGGCGCGCTTTGGCGCTGGCGGTCCATTCCTGTTCGGTCGC TTCAGCGGAGCGGATGCGATGTTCGCTCCCGTCGTCACCCGTTTCCAGACCTTCGCGGTTCCGGTGGCGGCCGACACGAG GGCCTATATGGAGACGATGATGGCGATGCCGGCCTTTGCCGCCTGGGTGAAGGATGGACTGGCCGAAACCTGGATCATCG ACCGAGTCGAGCGGGTTTGA
Upstream 100 bases:
>100_bases GCCCATGATCTTGTAATCGTGCCGGACGACGTGCGTGTCGTGAGGCTGTCTCTGTAAGGCGGCTGAGAGCGCACGCTCCT GATCGCGGAGATTGATCGAC
Downstream 100 bases:
>100_bases CGCGAGCGCCGGCGCCGCTGCCTTGACGCGGCGGGGCCGGCGCGCTCCTCTGCGCCGGGGAAAACCTCGGTTAAGGAGCG GACGATGGGATTGCTTGATA
Product: putative glutathione S-transferase (GST)
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTLTLVIGNKNYSSWSMRPWLALRGCDIPFEEIVIPLYTADPADKARILEHSPAGKVPILIDGDVTVWDSLSIIEYLAER FPAAGLWPTDVAARALARSVSAEMHSGFQALRNECPMNLHREIRPVELSADARANVARIEDIWRDCRARFGAGGPFLFGR FSGADAMFAPVVTRFQTFAVPVAADTRAYMETMMAMPAFAAWVKDGLAETWIIDRVERV
Sequences:
>Translated_219_residues MTLTLVIGNKNYSSWSMRPWLALRGCDIPFEEIVIPLYTADPADKARILEHSPAGKVPILIDGDVTVWDSLSIIEYLAER FPAAGLWPTDVAARALARSVSAEMHSGFQALRNECPMNLHREIRPVELSADARANVARIEDIWRDCRARFGAGGPFLFGR FSGADAMFAPVVTRFQTFAVPVAADTRAYMETMMAMPAFAAWVKDGLAETWIIDRVERV >Mature_218_residues TLTLVIGNKNYSSWSMRPWLALRGCDIPFEEIVIPLYTADPADKARILEHSPAGKVPILIDGDVTVWDSLSIIEYLAERF PAAGLWPTDVAARALARSVSAEMHSGFQALRNECPMNLHREIRPVELSADARANVARIEDIWRDCRARFGAGGPFLFGRF SGADAMFAPVVTRFQTFAVPVAADTRAYMETMMAMPAFAAWVKDGLAETWIIDRVERV
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24360; Mature: 24229
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTLVIGNKNYSSWSMRPWLALRGCDIPFEEIVIPLYTADPADKARILEHSPAGKVPIL CEEEEEECCCCCCCCCCCCEEEEECCCCCHHHEEEEEEECCCCCHHHHHHCCCCCCCCEE IDGDVTVWDSLSIIEYLAERFPAAGLWPTDVAARALARSVSAEMHSGFQALRNECPMNLH ECCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH REIRPVELSADARANVARIEDIWRDCRARFGAGGPFLFGRFSGADAMFAPVVTRFQTFAV HCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHEE PVAADTRAYMETMMAMPAFAAWVKDGLAETWIIDRVERV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLTLVIGNKNYSSWSMRPWLALRGCDIPFEEIVIPLYTADPADKARILEHSPAGKVPIL EEEEEECCCCCCCCCCCCEEEEECCCCCHHHEEEEEEECCCCCHHHHHHCCCCCCCCEE IDGDVTVWDSLSIIEYLAERFPAAGLWPTDVAARALARSVSAEMHSGFQALRNECPMNLH ECCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH REIRPVELSADARANVARIEDIWRDCRARFGAGGPFLFGRFSGADAMFAPVVTRFQTFAV HCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHEE PVAADTRAYMETMMAMPAFAAWVKDGLAETWIIDRVERV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA