| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yebQ [H]
Identifier: 146341452
GI number: 146341452
Start: 4740231
End: 4741661
Strand: Direct
Name: yebQ [H]
Synonym: BRADO4543
Alternate gene names: 146341452
Gene position: 4740231-4741661 (Clockwise)
Preceding gene: 146341451
Following gene: 146341453
Centisome position: 63.57
GC content: 68.83
Gene sequence:
>1431_bases ATGACATCTACGACCACGACCTCGATGGTGCATGCCGACGGGCTGCCGCTGCCCCAGCGAACCTGGGCGATCGTCACGAT CGCGCTCGGCATCGTGCTGGCCGTGGTGGACGGCGCCATCGCCAATGTGGCGCTGCCGACGATCGCGCGCGACCTCAACG CCAGCCCCGCGTTCTCGATCTGGATCGTCAACGGCTATCAGCTCGCGGTCACGATCTCGCTGCTGCCGCTGGCCTCGCTG GGCGAGATCATCGGTTATCGCCGCGTCTATCTCGCCGGCCTCGTGCTGTTCACCGCCGCCTCGCTGTTCTGCGCGCTGGC CGACAGCCTGCTCTTGTTGACGCTCGCGCGCATCCTGCAGGGCTTTGGCGCGGCCGGCATTCTCAGCGTGAACTCGGCGC TGGTACGTTTCACCTATCCGCACGCCCTGCTCGGCCGCGGCATCGGCATTAATGCGATGGTGGTCGCGGTGTCGGCGGCC GTTGGCCCGACAATCGCCGCCGGCATTCTCGCGGTCGGCAGCTGGCCCTGGCTGTTCGCGATCAACGTGCCGCTCGGCCT CGTCACCTTTGCCTTCGGCTTCCGCTTCCTGCCGCAGACGCCGCGCGCGCCGCACATGTTCGACTGGCAGAGCGCGGCGC TGAGCGCGGTGACCTTCGGCTTCCTGATTGCCGCGGTCGACAGCCTCGGCCATGGCGAGGCGCTGGCCACCTGCGCCATC GAGTTCGTCGTCGCCGTCACGGCCGGCTTCTGGCTGGTGTATCGCCAGACCCACATGGCCTCGCCGCTGCTGCCGCTCGA CCTCCTGCGCATCCCCGTCTTCGCATTGTCGATCGCGACCTCGATCTCGTCGTTCTGCGGCCAGATGCTCGCCTTCGTCG CGATTCCGTTCTATCTCGAAAGCCATTTCGGCTATTCGCCGGTGCAGATGGGCCTGTTGATCACGCCGTGGCCTATCGCG GTCGGCCTGACCGCGCCGATTGCCGGCCGGCTGGTCGAGCGCGTGCCGGCCGGCCTGCTCGGCGGCATCGGCCTCGTGAT CTTTGCCGGCGGTCTGCTCACGCTGGGCCTGTTGCCGCGCGAGCCGCAGGCCTGGGACGTTGTCTGGCGCATGGCGCTGG CCGGCTGCGGCTTCGGCCTGTTCCAGACGCCCAACAACCGCACGATGATCGCAGCTGCGCCGCGCGAACGTGCCGGCGGC GCCAGCGGCATGCTCGGCACCGCGCGCCTGCTCGGCCAGACCACCGGTGCGGCGCTGGTGGCGATGTTCCTCGCCATCGA TCCATCCGACGGCACAAGGCTGTCGCTGCTGACCGGCGTCGGCTTCGCCCTGGTCGGCGCATTCTTGAGCATGTTGCGCC TTTCGCCGGCCGGCGCACGCGGCGCGGAGCACGTCCGCATTCATGACGGCCAGCGGCTCAAGGGCGAGTGA
Upstream 100 bases:
>100_bases ACAGGCTCGCCCTGCCGATCGGCATGGAACAGGGATTGTGCAGCGCGGTTGCCTGTTTCCGAGCACCAACCGCGGCCCGG TTGCGGCCGGAGCTTCCACA
Downstream 100 bases:
>100_bases TCTCGCCTCCGCAACATGATACCTACAAACTGAAATCAATGTGACATGGGCGGGCGGAATGACAGACTGGACGATGCTGC CACTGCTCGCGCTCGCCGCC
Product: MFS family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MTSTTTTSMVHADGLPLPQRTWAIVTIALGIVLAVVDGAIANVALPTIARDLNASPAFSIWIVNGYQLAVTISLLPLASL GEIIGYRRVYLAGLVLFTAASLFCALADSLLLLTLARILQGFGAAGILSVNSALVRFTYPHALLGRGIGINAMVVAVSAA VGPTIAAGILAVGSWPWLFAINVPLGLVTFAFGFRFLPQTPRAPHMFDWQSAALSAVTFGFLIAAVDSLGHGEALATCAI EFVVAVTAGFWLVYRQTHMASPLLPLDLLRIPVFALSIATSISSFCGQMLAFVAIPFYLESHFGYSPVQMGLLITPWPIA VGLTAPIAGRLVERVPAGLLGGIGLVIFAGGLLTLGLLPREPQAWDVVWRMALAGCGFGLFQTPNNRTMIAAAPRERAGG ASGMLGTARLLGQTTGAALVAMFLAIDPSDGTRLSLLTGVGFALVGAFLSMLRLSPAGARGAEHVRIHDGQRLKGE
Sequences:
>Translated_476_residues MTSTTTTSMVHADGLPLPQRTWAIVTIALGIVLAVVDGAIANVALPTIARDLNASPAFSIWIVNGYQLAVTISLLPLASL GEIIGYRRVYLAGLVLFTAASLFCALADSLLLLTLARILQGFGAAGILSVNSALVRFTYPHALLGRGIGINAMVVAVSAA VGPTIAAGILAVGSWPWLFAINVPLGLVTFAFGFRFLPQTPRAPHMFDWQSAALSAVTFGFLIAAVDSLGHGEALATCAI EFVVAVTAGFWLVYRQTHMASPLLPLDLLRIPVFALSIATSISSFCGQMLAFVAIPFYLESHFGYSPVQMGLLITPWPIA VGLTAPIAGRLVERVPAGLLGGIGLVIFAGGLLTLGLLPREPQAWDVVWRMALAGCGFGLFQTPNNRTMIAAAPRERAGG ASGMLGTARLLGQTTGAALVAMFLAIDPSDGTRLSLLTGVGFALVGAFLSMLRLSPAGARGAEHVRIHDGQRLKGE >Mature_475_residues TSTTTTSMVHADGLPLPQRTWAIVTIALGIVLAVVDGAIANVALPTIARDLNASPAFSIWIVNGYQLAVTISLLPLASLG EIIGYRRVYLAGLVLFTAASLFCALADSLLLLTLARILQGFGAAGILSVNSALVRFTYPHALLGRGIGINAMVVAVSAAV GPTIAAGILAVGSWPWLFAINVPLGLVTFAFGFRFLPQTPRAPHMFDWQSAALSAVTFGFLIAAVDSLGHGEALATCAIE FVVAVTAGFWLVYRQTHMASPLLPLDLLRIPVFALSIATSISSFCGQMLAFVAIPFYLESHFGYSPVQMGLLITPWPIAV GLTAPIAGRLVERVPAGLLGGIGLVIFAGGLLTLGLLPREPQAWDVVWRMALAGCGFGLFQTPNNRTMIAAAPRERAGGA SGMLGTARLLGQTTGAALVAMFLAIDPSDGTRLSLLTGVGFALVGAFLSMLRLSPAGARGAEHVRIHDGQRLKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=453, Percent_Identity=57.1743929359823, Blast_Score=498, Evalue=1e-142, Organism=Escherichia coli, GI1790195, Length=419, Percent_Identity=26.9689737470167, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1788392, Length=303, Percent_Identity=31.023102310231, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1789042, Length=418, Percent_Identity=25.3588516746411, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1788710, Length=343, Percent_Identity=27.4052478134111, Blast_Score=98, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6325455, Length=163, Percent_Identity=31.2883435582822, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49703; Mature: 49572
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTTTTSMVHADGLPLPQRTWAIVTIALGIVLAVVDGAIANVALPTIARDLNASPAFSI CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE WIVNGYQLAVTISLLPLASLGEIIGYRRVYLAGLVLFTAASLFCALADSLLLLTLARILQ EEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFGAAGILSVNSALVRFTYPHALLGRGIGINAMVVAVSAAVGPTIAAGILAVGSWPWLFA CCCCCCEEECCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEE INVPLGLVTFAFGFRFLPQTPRAPHMFDWQSAALSAVTFGFLIAAVDSLGHGEALATCAI EECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EFVVAVTAGFWLVYRQTHMASPLLPLDLLRIPVFALSIATSISSFCGQMLAFVAIPFYLE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHFGYSPVQMGLLITPWPIAVGLTAPIAGRLVERVPAGLLGGIGLVIFAGGLLTLGLLPR HCCCCCCHHCCEEEECCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC EPQAWDVVWRMALAGCGFGLFQTPNNRTMIAAAPRERAGGASGMLGTARLLGQTTGAALV CCCHHHHHHHHHHHHCCCCEEECCCCCEEEEECCHHHCCCCCCCHHHHHHHHCCHHHHHH AMFLAIDPSDGTRLSLLTGVGFALVGAFLSMLRLSPAGARGAEHVRIHDGQRLKGE HHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure TSTTTTSMVHADGLPLPQRTWAIVTIALGIVLAVVDGAIANVALPTIARDLNASPAFSI CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE WIVNGYQLAVTISLLPLASLGEIIGYRRVYLAGLVLFTAASLFCALADSLLLLTLARILQ EEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFGAAGILSVNSALVRFTYPHALLGRGIGINAMVVAVSAAVGPTIAAGILAVGSWPWLFA CCCCCCEEECCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEE INVPLGLVTFAFGFRFLPQTPRAPHMFDWQSAALSAVTFGFLIAAVDSLGHGEALATCAI EECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EFVVAVTAGFWLVYRQTHMASPLLPLDLLRIPVFALSIATSISSFCGQMLAFVAIPFYLE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHFGYSPVQMGLLITPWPIAVGLTAPIAGRLVERVPAGLLGGIGLVIFAGGLLTLGLLPR HCCCCCCHHCCEEEECCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC EPQAWDVVWRMALAGCGFGLFQTPNNRTMIAAAPRERAGGASGMLGTARLLGQTTGAALV CCCHHHHHHHHHHHHCCCCEEECCCCCEEEEECCHHHCCCCCCCHHHHHHHHCCHHHHHH AMFLAIDPSDGTRLSLLTGVGFALVGAFLSMLRLSPAGARGAEHVRIHDGQRLKGE HHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]