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The map label for this gene is yfmM [H]

Identifier: 146341406

GI number: 146341406

Start: 4694594

End: 4696171

Strand: Reverse

Name: yfmM [H]

Synonym: BRADO4496

Alternate gene names: 146341406

Gene position: 4696171-4694594 (Counterclockwise)

Preceding gene: 146341409

Following gene: 146341403

Centisome position: 62.98

GC content: 69.65

Gene sequence:

>1578_bases
ATGCCCTCCTTTCTGACGCTCGACGCGGTCGCCGCCGCGACACCTGATCATCGTCGCCTGTTCGACAATCTCTCGCTCTC
TCTCGGTGCCGAACGCGTCGGCCTGGTCGGGCGCAACGGCTCCGGCAAATCGACCTTGCTGCGGATCGTTGCTGGTTTGT
CCGAGCCGGCCGCGGGAACGGTTACGCGAGCCGGCAGGCTCGGCACGCTCGCGCAGCACTGGGACCCCACGCTGCGTGTC
GATGAGGCGCTCGGCGTCTCCGGCGCGCTGGCGAAACTCGACCGGATCGTTGCCGGGAATGGCGATGACGAGGATCTCGG
CAGCGCGGATTGGATCCTCTCCGCCAGGATTGACGAGGCGCTGATCGAGGCAGGTCTCCCGGGCGTGACGCTGGATCGCG
CGATCGATTCGCTCAGCGGCGGCGAGCAGACGCGCATCGGCATCGCGCGGCTGCTGATCGAGGCGCCCGACCTGCTGCTG
CTCGACGAGCCCACCAACAATCTCGACGCTGACGGCCGCGCCGCCATCGGCCGACTGGTGCAGACCTGGCGCGGCGGGGT
GCTCGTCGCCAGCCATGACCGCGCGCTGCTGGAGCTGATGGACCGGATCGTCGAGCTGACGCCGGTCGGTGTGCGGATCG
TCGGAGGCGGCTGGTCGATGTTCGTGACGGCGCGCGACGAGGCGCGGGCACGCGCGACGGCCGCGCTGGAGCGGGCGGAT
GCGCGCCTGCGCGATGTGGGGCATGCCCTGCAGCGCCAGCGCGAGGCCAAGGCGCGCAAGGACCGGGCAGGGCGTGCAGC
GGCGGCGCGCGGCTCGGCGCCCAGAATCATGCTCGGTGCGCGCGCCGAGCGAGCGGAGAACACCGGCGGCCGCTCGCAGC
GGCTCGCCGAGCGCATGATCAGCGAGGCGGCCGAGCAACTTGATCAGGCGCGGCAGCAGGTCGAGGTGCTGACCCCGCTG
TCCATGATGCTGCCGCCGACCGGGCTCGGCGCCGGAACGGAATTGCTCGCGCTGGACGATGCAATTGTGATGGCGGGAAA
CCGGACCTTCGGTCCCTGGACGCTTCACATCAAAGGCCGTCAGCGGATCGCGATCACCGGGCGCAATGGCGCAGGCAAGA
CCACGCTGCTGCGGGCCGTGATGGGCGCCATCCCGTTGTCGAGCGGAAGGCTACGGCGCGCCGAGGGGCGTGTCGCCATG
CTGGATCAGCACGTCGCGCTACTCGACGGAAAGGAGAGCGTCGTCGGCAATCTCCGCCGCTTGCATCCGGCACTCAGCCG
CGAGGCGGCGCATGCGGCCTGTGCGCGCTTCGCCTTCCGCAACCGGGATGCCGAGCAGAGCGTGGAGACGCTGTCCGGCG
GCGAGCGCCTGCGCGCTGGATTGGTCTGCACGTTCGGCGGCCAGCAGCCGCCATCATTGTTGCTGCTCGACGAGCCGACC
AATCATCTCGACATCGCTTCGATCGAGATGCTGGAGCAGGCGCTCCGCGATTTCGACGGCGCGCTTCTCGTCGTCAGCCA
CGATCCGTCGTTCCTGGCGGCGATCGGCATCGCCGCGGAGTTTGAAGTGGCGAGCTGA

Upstream 100 bases:

>100_bases
TCGTTCTATAAGCATCATCACACCGTGAACAGGAGTGGTGCCGTGGATCGCAGGACCAACATTGCCCGCCGCTTTGTGTC
CTCTGCCGTCACGGTCATCC

Downstream 100 bases:

>100_bases
GCGCTTCGTGAACAGAACGGAAGCCGGGATGAGCGGAAGCCTGCGCCCGGAGGGCGGAGGCGGACGCGACATCCGGGTTC
TCACCAGTTGGCGCGGTGAA

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MPSFLTLDAVAAATPDHRRLFDNLSLSLGAERVGLVGRNGSGKSTLLRIVAGLSEPAAGTVTRAGRLGTLAQHWDPTLRV
DEALGVSGALAKLDRIVAGNGDDEDLGSADWILSARIDEALIEAGLPGVTLDRAIDSLSGGEQTRIGIARLLIEAPDLLL
LDEPTNNLDADGRAAIGRLVQTWRGGVLVASHDRALLELMDRIVELTPVGVRIVGGGWSMFVTARDEARARATAALERAD
ARLRDVGHALQRQREAKARKDRAGRAAAARGSAPRIMLGARAERAENTGGRSQRLAERMISEAAEQLDQARQQVEVLTPL
SMMLPPTGLGAGTELLALDDAIVMAGNRTFGPWTLHIKGRQRIAITGRNGAGKTTLLRAVMGAIPLSSGRLRRAEGRVAM
LDQHVALLDGKESVVGNLRRLHPALSREAAHAACARFAFRNRDAEQSVETLSGGERLRAGLVCTFGGQQPPSLLLLDEPT
NHLDIASIEMLEQALRDFDGALLVVSHDPSFLAAIGIAAEFEVAS

Sequences:

>Translated_525_residues
MPSFLTLDAVAAATPDHRRLFDNLSLSLGAERVGLVGRNGSGKSTLLRIVAGLSEPAAGTVTRAGRLGTLAQHWDPTLRV
DEALGVSGALAKLDRIVAGNGDDEDLGSADWILSARIDEALIEAGLPGVTLDRAIDSLSGGEQTRIGIARLLIEAPDLLL
LDEPTNNLDADGRAAIGRLVQTWRGGVLVASHDRALLELMDRIVELTPVGVRIVGGGWSMFVTARDEARARATAALERAD
ARLRDVGHALQRQREAKARKDRAGRAAAARGSAPRIMLGARAERAENTGGRSQRLAERMISEAAEQLDQARQQVEVLTPL
SMMLPPTGLGAGTELLALDDAIVMAGNRTFGPWTLHIKGRQRIAITGRNGAGKTTLLRAVMGAIPLSSGRLRRAEGRVAM
LDQHVALLDGKESVVGNLRRLHPALSREAAHAACARFAFRNRDAEQSVETLSGGERLRAGLVCTFGGQQPPSLLLLDEPT
NHLDIASIEMLEQALRDFDGALLVVSHDPSFLAAIGIAAEFEVAS
>Mature_524_residues
PSFLTLDAVAAATPDHRRLFDNLSLSLGAERVGLVGRNGSGKSTLLRIVAGLSEPAAGTVTRAGRLGTLAQHWDPTLRVD
EALGVSGALAKLDRIVAGNGDDEDLGSADWILSARIDEALIEAGLPGVTLDRAIDSLSGGEQTRIGIARLLIEAPDLLLL
DEPTNNLDADGRAAIGRLVQTWRGGVLVASHDRALLELMDRIVELTPVGVRIVGGGWSMFVTARDEARARATAALERADA
RLRDVGHALQRQREAKARKDRAGRAAAARGSAPRIMLGARAERAENTGGRSQRLAERMISEAAEQLDQARQQVEVLTPLS
MMLPPTGLGAGTELLALDDAIVMAGNRTFGPWTLHIKGRQRIAITGRNGAGKTTLLRAVMGAIPLSSGRLRRAEGRVAML
DQHVALLDGKESVVGNLRRLHPALSREAAHAACARFAFRNRDAEQSVETLSGGERLRAGLVCTFGGQQPPSLLLLDEPTN
HLDIASIEMLEQALRDFDGALLVVSHDPSFLAAIGIAAEFEVAS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=506, Percent_Identity=28.4584980237154, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI27881506, Length=515, Percent_Identity=24.8543689320388, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI10947137, Length=515, Percent_Identity=24.8543689320388, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI69354671, Length=229, Percent_Identity=28.82096069869, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI10947135, Length=229, Percent_Identity=28.82096069869, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI2367384, Length=558, Percent_Identity=31.8996415770609, Blast_Score=172, Evalue=7e-44,
Organism=Escherichia coli, GI1789751, Length=524, Percent_Identity=28.6259541984733, Blast_Score=161, Evalue=9e-41,
Organism=Escherichia coli, GI1787041, Length=526, Percent_Identity=27.7566539923954, Blast_Score=154, Evalue=2e-38,
Organism=Escherichia coli, GI1787182, Length=526, Percent_Identity=29.277566539924, Blast_Score=145, Evalue=6e-36,
Organism=Escherichia coli, GI1788165, Length=234, Percent_Identity=30.3418803418803, Blast_Score=86, Evalue=9e-18,
Organism=Escherichia coli, GI1789873, Length=185, Percent_Identity=35.6756756756757, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789891, Length=218, Percent_Identity=31.651376146789, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1787500, Length=204, Percent_Identity=30.3921568627451, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787758, Length=197, Percent_Identity=27.9187817258883, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790467, Length=205, Percent_Identity=31.7073170731707, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786345, Length=198, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87082064, Length=191, Percent_Identity=34.0314136125654, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788761, Length=206, Percent_Identity=28.1553398058252, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786703, Length=200, Percent_Identity=32.5, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=25.8181818181818, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17553372, Length=513, Percent_Identity=30.6042884990253, Blast_Score=138, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17555318, Length=506, Percent_Identity=26.8774703557312, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI193208177, Length=216, Percent_Identity=28.2407407407407, Blast_Score=69, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=558, Percent_Identity=27.0609318996416, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320874, Length=517, Percent_Identity=24.9516441005803, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=193, Percent_Identity=31.0880829015544, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6325030, Length=197, Percent_Identity=29.9492385786802, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641342, Length=528, Percent_Identity=28.9772727272727, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24666836, Length=523, Percent_Identity=29.8279158699809, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24642252, Length=508, Percent_Identity=28.740157480315, Blast_Score=148, Evalue=9e-36,
Organism=Drosophila melanogaster, GI18859989, Length=508, Percent_Identity=28.740157480315, Blast_Score=148, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 55796; Mature: 55665

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFLTLDAVAAATPDHRRLFDNLSLSLGAERVGLVGRNGSGKSTLLRIVAGLSEPAAGT
CCCCEEEHHHHHCCCHHHHHHHHCHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCC
VTRAGRLGTLAQHWDPTLRVDEALGVSGALAKLDRIVAGNGDDEDLGSADWILSARIDEA
HHCCCCCCCHHHHCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
LIEAGLPGVTLDRAIDSLSGGEQTRIGIARLLIEAPDLLLLDEPTNNLDADGRAAIGRLV
HHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
QTWRGGVLVASHDRALLELMDRIVELTPVGVRIVGGGWSMFVTARDEARARATAALERAD
HHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHHHHHHHH
ARLRDVGHALQRQREAKARKDRAGRAAAARGSAPRIMLGARAERAENTGGRSQRLAERMI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHH
SEAAEQLDQARQQVEVLTPLSMMLPPTGLGAGTELLALDDAIVMAGNRTFGPWTLHIKGR
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCEEEEECCCCCCCEEEEECCC
QRIAITGRNGAGKTTLLRAVMGAIPLSSGRLRRAEGRVAMLDQHVALLDGKESVVGNLRR
EEEEEECCCCCCHHHHHHHHHHHCCCCCCCEECCCCCEEEECCHHHEECCCHHHHHHHHH
LHPALSREAAHAACARFAFRNRDAEQSVETLSGGERLRAGLVCTFGGQQPPSLLLLDEPT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHEEECEEEEECCCCCCEEEEEECCC
NHLDIASIEMLEQALRDFDGALLVVSHDPSFLAAIGIAAEFEVAS
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCEEEEECC
>Mature Secondary Structure 
PSFLTLDAVAAATPDHRRLFDNLSLSLGAERVGLVGRNGSGKSTLLRIVAGLSEPAAGT
CCCEEEHHHHHCCCHHHHHHHHCHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCC
VTRAGRLGTLAQHWDPTLRVDEALGVSGALAKLDRIVAGNGDDEDLGSADWILSARIDEA
HHCCCCCCCHHHHCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
LIEAGLPGVTLDRAIDSLSGGEQTRIGIARLLIEAPDLLLLDEPTNNLDADGRAAIGRLV
HHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
QTWRGGVLVASHDRALLELMDRIVELTPVGVRIVGGGWSMFVTARDEARARATAALERAD
HHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHHHHHHHH
ARLRDVGHALQRQREAKARKDRAGRAAAARGSAPRIMLGARAERAENTGGRSQRLAERMI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHH
SEAAEQLDQARQQVEVLTPLSMMLPPTGLGAGTELLALDDAIVMAGNRTFGPWTLHIKGR
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCEEEEECCCCCCCEEEEECCC
QRIAITGRNGAGKTTLLRAVMGAIPLSSGRLRRAEGRVAMLDQHVALLDGKESVVGNLRR
EEEEEECCCCCCHHHHHHHHHHHCCCCCCCEECCCCCEEEECCHHHEECCCHHHHHHHHH
LHPALSREAAHAACARFAFRNRDAEQSVETLSGGERLRAGLVCTFGGQQPPSLLLLDEPT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHEEECEEEEECCCCCCEEEEEECCC
NHLDIASIEMLEQALRDFDGALLVVSHDPSFLAAIGIAAEFEVAS
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]