Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is bcp [C]

Identifier: 146341385

GI number: 146341385

Start: 4671839

End: 4672423

Strand: Reverse

Name: bcp [C]

Synonym: BRADO4472

Alternate gene names: 146341385

Gene position: 4672423-4671839 (Counterclockwise)

Preceding gene: 146341386

Following gene: 146341382

Centisome position: 62.66

GC content: 67.69

Gene sequence:

>585_bases
ATGACTCAGAAGAACCTGCTGGAGGTCGACTGGAGCAAGATCCCGGTGCCGGCCGATGACGGTGCGGCCGATCATCTCGT
CGGCATGACCCTTCCGCCGCTCAGCCTGCGCGCCACCGACGACTCGCTGGTGACGCTGTCGGATCTGCCGGGACGGACGG
TGGTGTTCGCCTATCCGCGCACCGGCGAGCCCGGCAAGGTGTCGCTGGTCGAGGACTGGGACCTGATCCCGGGCGCACGC
GGCTGCACGCCGCAGGCCTGCAGCTTCCGCGACCTGTTCGGCGAGCTCAAGGCGGCCGGCGCCACGCACGTCTTCGGCCT
GTCGACGCAGAGCAACGCCTATCAGACCGAGATGGCCTCGCGGCTGCATCTGCCGTTCCCGGTGTTGTCCGACGAGAAGC
TGGAACTGACCCACGCGCTGCGCCTGCCGACGATGGAGATCGCCGGCCTGACCCTGATCAAGCGCCTCGCGCTGATCGTC
GACGACGCTCGCATCACCCACGTGTTCTACCCGGTGTTCCCGCCAGACCGGAACGCGACCGACGTGCTGGACTGGCTGAA
GGATCATCCAGCGTCGACGGCCTGA

Upstream 100 bases:

>100_bases
GGTTGACGCGCTGCGAGCCGTTGCGCGCTTGCCTGGGCCGCAGTCTGAACGCCAGAGCCTTGCCTAAACCTTCTTAGTGC
CTCAGCCGTGGGATGCACCG

Downstream 100 bases:

>100_bases
GACAGGCGTAGGGTGGGCAAAGCAGGCCGCGCGTGCCCACCGGCGGTGCCGGTGAGTGAGGCCGGTGGGCACGGCGCGCG
AAGCAGCAATGCGAACGACA

Product: putative thiol-specific antioxidant-like protein (thiol peroxidase Bcp)

Products: Acceptor; H2O; oxidized thioredoxin [C]

Alternate protein names: BcpB Protein; Redoxin; Thiol-Specific Antioxidant Related Protein; Transcriptional Regulator; HxlR Family Transcriptional Regulator; Antioxidant; Peroxiredoxin; Redoxin Domain Protein; Bacterioferritin Comigratory Protein BcpB; Thiol-Specific Antioxidant Related Protein/Peroxidoxin BcpB; Thioredoxin Peroxidase Family Protein; Redoxin Superfamily; Peroxiredoxin Family

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTQKNLLEVDWSKIPVPADDGAADHLVGMTLPPLSLRATDDSLVTLSDLPGRTVVFAYPRTGEPGKVSLVEDWDLIPGAR
GCTPQACSFRDLFGELKAAGATHVFGLSTQSNAYQTEMASRLHLPFPVLSDEKLELTHALRLPTMEIAGLTLIKRLALIV
DDARITHVFYPVFPPDRNATDVLDWLKDHPASTA

Sequences:

>Translated_194_residues
MTQKNLLEVDWSKIPVPADDGAADHLVGMTLPPLSLRATDDSLVTLSDLPGRTVVFAYPRTGEPGKVSLVEDWDLIPGAR
GCTPQACSFRDLFGELKAAGATHVFGLSTQSNAYQTEMASRLHLPFPVLSDEKLELTHALRLPTMEIAGLTLIKRLALIV
DDARITHVFYPVFPPDRNATDVLDWLKDHPASTA
>Mature_193_residues
TQKNLLEVDWSKIPVPADDGAADHLVGMTLPPLSLRATDDSLVTLSDLPGRTVVFAYPRTGEPGKVSLVEDWDLIPGARG
CTPQACSFRDLFGELKAAGATHVFGLSTQSNAYQTEMASRLHLPFPVLSDEKLELTHALRLPTMEIAGLTLIKRLALIVD
DARITHVFYPVFPPDRNATDVLDWLKDHPASTA

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21183; Mature: 21052

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKNLLEVDWSKIPVPADDGAADHLVGMTLPPLSLRATDDSLVTLSDLPGRTVVFAYPR
CCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCEEEEECCCCCEEEEEECC
TGEPGKVSLVEDWDLIPGARGCTPQACSFRDLFGELKAAGATHVFGLSTQSNAYQTEMAS
CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
RLHLPFPVLSDEKLELTHALRLPTMEIAGLTLIKRLALIVDDARITHVFYPVFPPDRNAT
HCCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHH
DVLDWLKDHPASTA
HHHHHHHCCCCCCC
>Mature Secondary Structure 
TQKNLLEVDWSKIPVPADDGAADHLVGMTLPPLSLRATDDSLVTLSDLPGRTVVFAYPR
CCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCEEEEECCCCCEEEEEECC
TGEPGKVSLVEDWDLIPGARGCTPQACSFRDLFGELKAAGATHVFGLSTQSNAYQTEMAS
CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
RLHLPFPVLSDEKLELTHALRLPTMEIAGLTLIKRLALIVDDARITHVFYPVFPPDRNAT
HCCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHH
DVLDWLKDHPASTA
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]

Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]

General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA