The gene/protein map for NC_009445 is currently unavailable.
Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146341326

Identifier: 146341326

GI number: 146341326

Start: 4610225

End: 4610995

Strand: Reverse

Name: 146341326

Synonym: BRADO4408

Alternate gene names: NA

Gene position: 4610995-4610225 (Counterclockwise)

Preceding gene: 146341327

Following gene: 146341324

Centisome position: 61.84

GC content: 60.18

Gene sequence:

>771_bases
ATGAGTCTGAAGGATCACAATCCGGTCGATGCCAAGACACCGAAACGGGTTGCTATCGTTCTTGCCAACCCGGCTATCTC
GCCAACGTTGGGTACACCGGTCGGGTTCTGGTGGAGCGAACTGACGCACCCGTGGTTTGCCTTCCGAGAAAAAGGCTACG
TCGTGAAGCTGTTCAGCTACGGCGGAGGCAAGGTCGAACCTGATGCGATGAGCGACCCGGAAGATCCGACCGGCTATTCG
GCAGGCGACCTCATCACCCAGGGCTTCAGGCACACACCGTCATTGATGGCGCTGTTGGAGAATACCAAACCAGTAAGCGC
GATCAGGCTCGAAGACTTCGACGCGATCCTGATCGCTGGCGGTCAGGCGCCGATGGTGACCATGCCCGACCAGACGGCGC
TGCATGGGCTGTTCGCGGCCTTCTACGAGGCGGGCAAGGTCGCGTGCTGTCTGTGCCACGGCTCGTCGATCCTGCGTTAT
GCGAGGCTCTCGACAGGCGAATATCTCTGCAAGGGCAAGACCGTCACGGGCTTCGCCAATGTCGAGGAGGATTTCGGTGA
TCACGCCGTGTGGGACCTCGGCTTCTTGCCACGCGGCAAGCATCTGATGCCATGGCGGATCGAAGACGAACTCAGAACAC
TGGGCGCCAATTATGTCCAGGCCGGACTCTGGCGCGGCTTTGCCGTGCGGGACGGAAATCTCGTCACGGGCCAGCAAAAT
TTCTCAGGCATGGAAACCGCCGAGCTCGTCATCCGCGCCCTCGGAGAATGA

Upstream 100 bases:

>100_bases
CGTGTCGAGATGATTGCGGATGCGGGTCACTTCCCGCAGATCGACCAGCCCGATGCGACGGCCGAGGCCATCGCGCGCGC
GCTCGTCTGAGGAGTGACTG

Downstream 100 bases:

>100_bases
GGCGGCAGCTCGTGATTTAACCTCGCTGTACAATAGGCGCGTTACTCCGCAGCCGGGTGTCACGGCCCGTGCCGAAGAAC
GGAGTGAGGGGAGGGCGAAG

Product: putative amidotransferase/amidase

Products: NA

Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; C56 Family Peptidase; Intracellular Protease/Amidase-Like; Amidotransferase; Protease I; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Amidotransferase/Amidase; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSLKDHNPVDAKTPKRVAIVLANPAISPTLGTPVGFWWSELTHPWFAFREKGYVVKLFSYGGGKVEPDAMSDPEDPTGYS
AGDLITQGFRHTPSLMALLENTKPVSAIRLEDFDAILIAGGQAPMVTMPDQTALHGLFAAFYEAGKVACCLCHGSSILRY
ARLSTGEYLCKGKTVTGFANVEEDFGDHAVWDLGFLPRGKHLMPWRIEDELRTLGANYVQAGLWRGFAVRDGNLVTGQQN
FSGMETAELVIRALGE

Sequences:

>Translated_256_residues
MSLKDHNPVDAKTPKRVAIVLANPAISPTLGTPVGFWWSELTHPWFAFREKGYVVKLFSYGGGKVEPDAMSDPEDPTGYS
AGDLITQGFRHTPSLMALLENTKPVSAIRLEDFDAILIAGGQAPMVTMPDQTALHGLFAAFYEAGKVACCLCHGSSILRY
ARLSTGEYLCKGKTVTGFANVEEDFGDHAVWDLGFLPRGKHLMPWRIEDELRTLGANYVQAGLWRGFAVRDGNLVTGQQN
FSGMETAELVIRALGE
>Mature_255_residues
SLKDHNPVDAKTPKRVAIVLANPAISPTLGTPVGFWWSELTHPWFAFREKGYVVKLFSYGGGKVEPDAMSDPEDPTGYSA
GDLITQGFRHTPSLMALLENTKPVSAIRLEDFDAILIAGGQAPMVTMPDQTALHGLFAAFYEAGKVACCLCHGSSILRYA
RLSTGEYLCKGKTVTGFANVEEDFGDHAVWDLGFLPRGKHLMPWRIEDELRTLGANYVQAGLWRGFAVRDGNLVTGQQNF
SGMETAELVIRALGE

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=249, Percent_Identity=27.710843373494, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27964; Mature: 27833

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKDHNPVDAKTPKRVAIVLANPAISPTLGTPVGFWWSELTHPWFAFREKGYVVKLFSY
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEEEC
GGGKVEPDAMSDPEDPTGYSAGDLITQGFRHTPSLMALLENTKPVSAIRLEDFDAILIAG
CCCEECCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEC
GQAPMVTMPDQTALHGLFAAFYEAGKVACCLCHGSSILRYARLSTGEYLCKGKTVTGFAN
CCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCEEECCCEEEEECC
VEEDFGDHAVWDLGFLPRGKHLMPWRIEDELRTLGANYVQAGLWRGFAVRDGNLVTGQQN
CHHHCCCCEEEEECCCCCCCCCCCEEEHHHHHHHCHHHHHHHHHCCEEEECCCEEECCCC
FSGMETAELVIRALGE
CCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SLKDHNPVDAKTPKRVAIVLANPAISPTLGTPVGFWWSELTHPWFAFREKGYVVKLFSY
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEEEC
GGGKVEPDAMSDPEDPTGYSAGDLITQGFRHTPSLMALLENTKPVSAIRLEDFDAILIAG
CCCEECCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEC
GQAPMVTMPDQTALHGLFAAFYEAGKVACCLCHGSSILRYARLSTGEYLCKGKTVTGFAN
CCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCEEECCCEEEEECC
VEEDFGDHAVWDLGFLPRGKHLMPWRIEDELRTLGANYVQAGLWRGFAVRDGNLVTGQQN
CHHHCCCCEEEEECCCCCCCCCCCEEEHHHHHHHCHHHHHHHHHCCEEEECCCEEECCCC
FSGMETAELVIRALGE
CCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA