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The map label for this gene is yicI [C]

Identifier: 146341310

GI number: 146341310

Start: 4588225

End: 4590534

Strand: Reverse

Name: yicI [C]

Synonym: BRADO4392

Alternate gene names: 146341310

Gene position: 4590534-4588225 (Counterclockwise)

Preceding gene: 146341311

Following gene: 146341309

Centisome position: 61.56

GC content: 68.23

Gene sequence:

>2310_bases
ATGAAAGCCCTCACTCATGGCCGCTTCCGCGGCATCCATGACGGCGCCGCGCTGTTCGAGCTTGCGACCGCGGCGACGAC
GTCTGTTCTCGCCACGCTGCGCGTCGCAATCCTCGAGCGCGACATCGGCCGCGTCACCCTGCAACGGCCGGAGGGCTACC
GGCTCGATCGCGGCTGGGCGATCGCCCCCGACCGCACCGAGCCGCCATTCGAGGGACGGCAGCGCGACGACGTCTCGGGC
TTTGCCAATCCGGCTGTGGTGGTGACGGAGCAGGGCGGCGTCGTCACACTCGCGACAGCCGGCCTCCGCGCGGAAGTGAA
GCTCGATCCATTCGGCATCGCGTGGTATCGCCATGGCGAGTCCCAGCCGTTCCTGCGCGATCGCCCGACCCAGGCCTATT
TGTTGTCGCGCAATTCCGGCGCCCTGATACACGCGATGGAGCGTCACCAGGACGAGCGCCATTACGGCCTCGGCGACAAG
GCCGGCCCGCTCGATCGCACCGGCCGGCGCTTCGCCATCGACGCCGTCGATCCCTGCGGCTTCGACGCCGAACTGTCGGA
CCCGCTGTACAAGATGCTGCCGTTTGTCATCGTCGATGGCGCGCGCGGCGCCCATGGCGTGTTCTACGACAATCTCGCGC
TCGGCGCGGTCGACCTCGGCTGCACGATCGACAATTATCACGGCCTGTTCCGCCTCTATCGCGCCGAGGATGGCGATCTC
GACTACTACGTGCTCGCCGGCCCGACCGTGCCCGACGTGACGCGACGGTTCTCCTGGCTGACCGGCGGACAGGCCTTCGC
GCCGCGCTGGACGCTCGGCTTCGCGATGACGACGATGACGATCGCGGATGCGCCCGACGCGGATGCGCGCATCACCGCCT
TCATTGCCGATTGCGAGCGTCACGGCATCCGCTGCGACAGCTTCCATTTCGGCTCGGGCTACACCTCGATTGGCAAGCGC
CGCTACGTCTTCAACTGGAATCGCGACAAGTTTCCCGATCCGGCCGCGACGATGGCGCGGCTCAAGGCGGCGGGCATGCA
GCCGGTCACCAACATCAAGCCCTGCCTGCTCGATGATCATCCCCGGCTCGATGAGGCCAGAGCGCGCGGCATCCTGGTCG
CCGATGGCGAGACCGGCGCGCCGGCCATCGCGCAATTCTGGGACGGGCTGGGCTTCCATGTCGACTTCACCAACCCCGAG
GGGCGACGATGGTGGGCCGACGGCATCCGCAACGCGCTGCTCGGCTTTGGCGTGACAGCGATGTGGAGCGACAACAACGA
ATACGAGATCTGGGACGAGGACGCGGTGTGCGCCGGCGACGGCAGGCCGTTCCCGCAGGCGCTCGCCCGCCCGGCGCAGG
CGCTGTTGATGCACAAGCTCGCCTACGAGACCCAGGCCGCGCACGATTCAGGCAAGCGCCCCTACACGATCACGCGCGCC
GGCGGCGCCGGCATCGCCCGCTACGGCCAGACCTGGAGCGGCGACAATGAGACCGCCTGGAAGACGCTGCGCTACAATCT
CACCCAGGGCCTGAACATGAGCCTGTCGGGGCTCTACAACATCGGCCACGATGTCGGCGGCTTCCACGGACCGTCGCCGG
GACCGGAGCTGCTGTGCCGGTTCGTCGAGTTCTGCGCGCTCTGGCCGCGCATGGTGATGAACTCCTGGAAGGAGGACGGC
AACTTCAGCACGCCCTGGATGCACCCCGGCGTGCTGCCCGAGGTGCGCTCCGTCCTGGAACTGCGCCATCGTCTGATCCC
GTATCTTTACACGCAGATGTGGCGCGCGGCGGTGGAGGACATGCCGGCGGTGCGGCCGCTGCTGTGGGACTTTGCGTCCG
ATCCGATCGCGGCCGGGATCGAGGATGCCTTCATGCTCGGCCCGCATCTGCTCGTCGCTCCCGTGCTCGAGGAGGGCGCG
ACAACGCGCGAGCTCTATCTGCCGGTTCACCCCGGCGGCTGGTACGACTGGCATGACGGCACGCCGTTCGAGGGCGGACG
CCGCATCACCGTCGCGGCGCCGCTCGGCCGCCTGCCGCTGTTCGCCCGCGCCGGCGCGATCGTTCCGGTCGAGGACGAAG
CAGGACTGACAGCGGTCGTGTTCGGCGCGCCCGATCAGGGCAGCGCAGGCTGCCTCTATGTCGACGACGGCGAGACGGCC
GACTGGCGCCGGCAGGGTCAGCTGATCGAGCTCCGGCTAAGCCGCGAAAATGCCGGCTTCGTGCTCGACGTCAGCAGCGG
TGAGGCCGCAGACATCCGCGCCCGCGGCGTCGGCATCGAAATTCGTGAAGTGGTCGTTTCACCAGCCTAG

Upstream 100 bases:

>100_bases
GGCGATGCCGTCGCGATCCTTTTTTCGCCCGACCATCTGCATCTGTTCGACGCGACCGGCGCGGCTCTTGCCGGCCCCGA
TCGACCCGGAGCCTGATCTC

Downstream 100 bases:

>100_bases
GCGTCGCAATCTCCTTTGGAGAAATACCAGTGCTCCGCGAGGATTGGCCTATCCTTGCGGAGTCGCGTGTTTTCGATGTG
AAGGTCCGTGCCGTAGCGAT

Product: putative alpha-glucosidase

Products: NA

Alternate protein names: Alpha-glucosidase II [H]

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MKALTHGRFRGIHDGAALFELATAATTSVLATLRVAILERDIGRVTLQRPEGYRLDRGWAIAPDRTEPPFEGRQRDDVSG
FANPAVVVTEQGGVVTLATAGLRAEVKLDPFGIAWYRHGESQPFLRDRPTQAYLLSRNSGALIHAMERHQDERHYGLGDK
AGPLDRTGRRFAIDAVDPCGFDAELSDPLYKMLPFVIVDGARGAHGVFYDNLALGAVDLGCTIDNYHGLFRLYRAEDGDL
DYYVLAGPTVPDVTRRFSWLTGGQAFAPRWTLGFAMTTMTIADAPDADARITAFIADCERHGIRCDSFHFGSGYTSIGKR
RYVFNWNRDKFPDPAATMARLKAAGMQPVTNIKPCLLDDHPRLDEARARGILVADGETGAPAIAQFWDGLGFHVDFTNPE
GRRWWADGIRNALLGFGVTAMWSDNNEYEIWDEDAVCAGDGRPFPQALARPAQALLMHKLAYETQAAHDSGKRPYTITRA
GGAGIARYGQTWSGDNETAWKTLRYNLTQGLNMSLSGLYNIGHDVGGFHGPSPGPELLCRFVEFCALWPRMVMNSWKEDG
NFSTPWMHPGVLPEVRSVLELRHRLIPYLYTQMWRAAVEDMPAVRPLLWDFASDPIAAGIEDAFMLGPHLLVAPVLEEGA
TTRELYLPVHPGGWYDWHDGTPFEGGRRITVAAPLGRLPLFARAGAIVPVEDEAGLTAVVFGAPDQGSAGCLYVDDGETA
DWRRQGQLIELRLSRENAGFVLDVSSGEAADIRARGVGIEIREVVVSPA

Sequences:

>Translated_769_residues
MKALTHGRFRGIHDGAALFELATAATTSVLATLRVAILERDIGRVTLQRPEGYRLDRGWAIAPDRTEPPFEGRQRDDVSG
FANPAVVVTEQGGVVTLATAGLRAEVKLDPFGIAWYRHGESQPFLRDRPTQAYLLSRNSGALIHAMERHQDERHYGLGDK
AGPLDRTGRRFAIDAVDPCGFDAELSDPLYKMLPFVIVDGARGAHGVFYDNLALGAVDLGCTIDNYHGLFRLYRAEDGDL
DYYVLAGPTVPDVTRRFSWLTGGQAFAPRWTLGFAMTTMTIADAPDADARITAFIADCERHGIRCDSFHFGSGYTSIGKR
RYVFNWNRDKFPDPAATMARLKAAGMQPVTNIKPCLLDDHPRLDEARARGILVADGETGAPAIAQFWDGLGFHVDFTNPE
GRRWWADGIRNALLGFGVTAMWSDNNEYEIWDEDAVCAGDGRPFPQALARPAQALLMHKLAYETQAAHDSGKRPYTITRA
GGAGIARYGQTWSGDNETAWKTLRYNLTQGLNMSLSGLYNIGHDVGGFHGPSPGPELLCRFVEFCALWPRMVMNSWKEDG
NFSTPWMHPGVLPEVRSVLELRHRLIPYLYTQMWRAAVEDMPAVRPLLWDFASDPIAAGIEDAFMLGPHLLVAPVLEEGA
TTRELYLPVHPGGWYDWHDGTPFEGGRRITVAAPLGRLPLFARAGAIVPVEDEAGLTAVVFGAPDQGSAGCLYVDDGETA
DWRRQGQLIELRLSRENAGFVLDVSSGEAADIRARGVGIEIREVVVSPA
>Mature_769_residues
MKALTHGRFRGIHDGAALFELATAATTSVLATLRVAILERDIGRVTLQRPEGYRLDRGWAIAPDRTEPPFEGRQRDDVSG
FANPAVVVTEQGGVVTLATAGLRAEVKLDPFGIAWYRHGESQPFLRDRPTQAYLLSRNSGALIHAMERHQDERHYGLGDK
AGPLDRTGRRFAIDAVDPCGFDAELSDPLYKMLPFVIVDGARGAHGVFYDNLALGAVDLGCTIDNYHGLFRLYRAEDGDL
DYYVLAGPTVPDVTRRFSWLTGGQAFAPRWTLGFAMTTMTIADAPDADARITAFIADCERHGIRCDSFHFGSGYTSIGKR
RYVFNWNRDKFPDPAATMARLKAAGMQPVTNIKPCLLDDHPRLDEARARGILVADGETGAPAIAQFWDGLGFHVDFTNPE
GRRWWADGIRNALLGFGVTAMWSDNNEYEIWDEDAVCAGDGRPFPQALARPAQALLMHKLAYETQAAHDSGKRPYTITRA
GGAGIARYGQTWSGDNETAWKTLRYNLTQGLNMSLSGLYNIGHDVGGFHGPSPGPELLCRFVEFCALWPRMVMNSWKEDG
NFSTPWMHPGVLPEVRSVLELRHRLIPYLYTQMWRAAVEDMPAVRPLLWDFASDPIAAGIEDAFMLGPHLLVAPVLEEGA
TTRELYLPVHPGGWYDWHDGTPFEGGRRITVAAPLGRLPLFARAGAIVPVEDEAGLTAVVFGAPDQGSAGCLYVDDGETA
DWRRQGQLIELRLSRENAGFVLDVSSGEAADIRARGVGIEIREVVVSPA

Specific function: Unknown

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI66346737, Length=540, Percent_Identity=29.2592592592593, Blast_Score=213, Evalue=5e-55,
Organism=Homo sapiens, GI38202257, Length=592, Percent_Identity=28.0405405405405, Blast_Score=203, Evalue=5e-52,
Organism=Homo sapiens, GI88900491, Length=592, Percent_Identity=28.0405405405405, Blast_Score=203, Evalue=6e-52,
Organism=Homo sapiens, GI119393895, Length=646, Percent_Identity=26.1609907120743, Blast_Score=159, Evalue=1e-38,
Organism=Homo sapiens, GI119393893, Length=646, Percent_Identity=26.1609907120743, Blast_Score=159, Evalue=1e-38,
Organism=Homo sapiens, GI119393891, Length=646, Percent_Identity=26.1609907120743, Blast_Score=159, Evalue=1e-38,
Organism=Homo sapiens, GI221316699, Length=605, Percent_Identity=25.7851239669421, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI157364974, Length=559, Percent_Identity=24.3291592128801, Blast_Score=140, Evalue=5e-33,
Organism=Homo sapiens, GI310115361, Length=538, Percent_Identity=24.3494423791822, Blast_Score=120, Evalue=3e-27,
Organism=Escherichia coli, GI2367256, Length=542, Percent_Identity=25.6457564575646, Blast_Score=156, Evalue=5e-39,
Organism=Escherichia coli, GI2367323, Length=397, Percent_Identity=27.9596977329975, Blast_Score=119, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI71991189, Length=591, Percent_Identity=26.2267343485618, Blast_Score=187, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17560798, Length=595, Percent_Identity=25.546218487395, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17560800, Length=595, Percent_Identity=25.546218487395, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI32563849, Length=279, Percent_Identity=27.2401433691756, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71985706, Length=268, Percent_Identity=28.3582089552239, Blast_Score=103, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6319706, Length=613, Percent_Identity=26.7536704730832, Blast_Score=172, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24643749, Length=585, Percent_Identity=26.4957264957265, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24643753, Length=585, Percent_Identity=26.4957264957265, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24643751, Length=585, Percent_Identity=26.4957264957265, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24643746, Length=585, Percent_Identity=26.4957264957265, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI21357605, Length=585, Percent_Identity=26.4957264957265, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24650054, Length=371, Percent_Identity=25.3369272237197, Blast_Score=94, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: =3.2.1.20 [H]

Molecular weight: Translated: 84602; Mature: 84602

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS00191 CYTOCHROME_B5_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALTHGRFRGIHDGAALFELATAATTSVLATLRVAILERDIGRVTLQRPEGYRLDRGWA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCEE
IAPDRTEPPFEGRQRDDVSGFANPAVVVTEQGGVVTLATAGLRAEVKLDPFGIAWYRHGE
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCEEEEEEECCC
SQPFLRDRPTQAYLLSRNSGALIHAMERHQDERHYGLGDKAGPLDRTGRRFAIDAVDPCG
CCCCCCCCCCEEEEEECCCCCEEEEHHHCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCC
FDAELSDPLYKMLPFVIVDGARGAHGVFYDNLALGAVDLGCTIDNYHGLFRLYRAEDGDL
CCCCCCCHHHHHCCEEEEECCCCCCCEEECCEEECEEEECCEECCCCCEEEEEECCCCCC
DYYVLAGPTVPDVTRRFSWLTGGQAFAPRWTLGFAMTTMTIADAPDADARITAFIADCER
CEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEHHHH
HGIRCDSFHFGSGYTSIGKRRYVFNWNRDKFPDPAATMARLKAAGMQPVTNIKPCLLDDH
CCCEECCEECCCCCHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCC
PRLDEARARGILVADGETGAPAIAQFWDGLGFHVDFTNPEGRRWWADGIRNALLGFGVTA
CCCCHHHHCEEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEE
MWSDNNEYEIWDEDAVCAGDGRPFPQALARPAQALLMHKLAYETQAAHDSGKRPYTITRA
EECCCCCEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
GGAGIARYGQTWSGDNETAWKTLRYNLTQGLNMSLSGLYNIGHDVGGFHGPSPGPELLCR
CCCCHHHCCCCCCCCCHHHHHHEEEHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH
FVEFCALWPRMVMNSWKEDGNFSTPWMHPGVLPEVRSVLELRHRLIPYLYTQMWRAAVED
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPAVRPLLWDFASDPIAAGIEDAFMLGPHLLVAPVLEEGATTRELYLPVHPGGWYDWHDG
CCCHHHHHHHHCCCCHHCCCCHHHHHCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC
TPFEGGRRITVAAPLGRLPLFARAGAIVPVEDEAGLTAVVFGAPDQGSAGCLYVDDGETA
CCCCCCCEEEEECCCCCCCHHHHCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCC
DWRRQGQLIELRLSRENAGFVLDVSSGEAADIRARGVGIEIREVVVSPA
CHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEEECCCEEEEEEEECCC
>Mature Secondary Structure
MKALTHGRFRGIHDGAALFELATAATTSVLATLRVAILERDIGRVTLQRPEGYRLDRGWA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCEE
IAPDRTEPPFEGRQRDDVSGFANPAVVVTEQGGVVTLATAGLRAEVKLDPFGIAWYRHGE
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCEEEEEEECCC
SQPFLRDRPTQAYLLSRNSGALIHAMERHQDERHYGLGDKAGPLDRTGRRFAIDAVDPCG
CCCCCCCCCCEEEEEECCCCCEEEEHHHCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCC
FDAELSDPLYKMLPFVIVDGARGAHGVFYDNLALGAVDLGCTIDNYHGLFRLYRAEDGDL
CCCCCCCHHHHHCCEEEEECCCCCCCEEECCEEECEEEECCEECCCCCEEEEEECCCCCC
DYYVLAGPTVPDVTRRFSWLTGGQAFAPRWTLGFAMTTMTIADAPDADARITAFIADCER
CEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEHHHH
HGIRCDSFHFGSGYTSIGKRRYVFNWNRDKFPDPAATMARLKAAGMQPVTNIKPCLLDDH
CCCEECCEECCCCCHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCC
PRLDEARARGILVADGETGAPAIAQFWDGLGFHVDFTNPEGRRWWADGIRNALLGFGVTA
CCCCHHHHCEEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEE
MWSDNNEYEIWDEDAVCAGDGRPFPQALARPAQALLMHKLAYETQAAHDSGKRPYTITRA
EECCCCCEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
GGAGIARYGQTWSGDNETAWKTLRYNLTQGLNMSLSGLYNIGHDVGGFHGPSPGPELLCR
CCCCHHHCCCCCCCCCHHHHHHEEEHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH
FVEFCALWPRMVMNSWKEDGNFSTPWMHPGVLPEVRSVLELRHRLIPYLYTQMWRAAVED
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPAVRPLLWDFASDPIAAGIEDAFMLGPHLLVAPVLEEGATTRELYLPVHPGGWYDWHDG
CCCHHHHHHHHCCCCHHCCCCHHHHHCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC
TPFEGGRRITVAAPLGRLPLFARAGAIVPVEDEAGLTAVVFGAPDQGSAGCLYVDDGETA
CCCCCCCEEEEECCCCCCCHHHHCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCC
DWRRQGQLIELRLSRENAGFVLDVSSGEAADIRARGVGIEIREVVVSPA
CHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEEECCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10945254 [H]