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The map label for this gene is cmpB [H]

Identifier: 146341285

GI number: 146341285

Start: 4552763

End: 4553776

Strand: Reverse

Name: cmpB [H]

Synonym: BRADO4364

Alternate gene names: 146341285

Gene position: 4553776-4552763 (Counterclockwise)

Preceding gene: 146341286

Following gene: 146341284

Centisome position: 61.07

GC content: 67.26

Gene sequence:

>1014_bases
ATGTCGACATTTTCGCTGTCTGAGACCGCCGGAGGCGATATCGCGCGCGCCACGGGCCTCGGCGCCAAGCTTCGCGACAT
CGCGCCGGGCATTGCCGCGGCGCTCGCCTGGGCTCTGTTCGGCGCGTCCTGCTTCGTGCGCGAGGACGTCGGCGACTGGT
CGCGCACCACGGATCTCGCCGTCGCGGCGTTCGTGATCGCAGCGCTCGTGCTGGTCTCCAGCATCGCGGCGCTGCGGTTG
GGGCGAGCTGGTGCCGCCCTGCGCAGGCGAAGCCCATGGTTGCTCGCGCTCGGCGTGTTCCTGACACTCTGGGAGCTGGC
GACGGCAAAATTCGCCTGGCTGCCGCTGCCTTTCTTTCCGCCGCCGCAGGCCATCATCGAGGTTTACACCGACGATCTGC
CGAAGCTGCTGGACAGCGTGGTCGCCTCGATCAAGCTGCAACTCGGCGGCTACGCCATCGGCGCGGCGATCGGCTTCGTG
ACGGGCGTCTCCATCGGCTGGTCGACGCGGATCGGCTATTGGGTGCACCCCGTGTTGCGTTTCATCGGGCCAGTGCCGGC
CACGGCTTGGCTGCCGATCGCGTTCTTTACCTTCCCGACCAGCTGGAGCGCGTCGACGTTCCTGATCGCGCTCGCCACGG
GCTTTCCGGTGACGGTGCTGACTTGGTCCGGCGTCGCCAGCGTGCCCACCGCCTACTACGATGTCGCGCGCACACTCGGC
GCCAGGCCATGGTTCCTAGTGCTCAAGGTTGCGATCCCCGCGGCTTTGCCGCATGTGTTCGTCGGCCTGTTCATGGGCCT
CGGCGCCTCCTTCGCGGTGCTGGTCATCGCCGAGATGATCGGCGTCAAGGCCGGGCTTGGCTGGTACCTGCAATGGGCGC
AGGGCTGGGCCGCCTACGCCAACATGTACGCCGCGCTGCTGGTGATGTCGCTGCTCTGCTCCGGCGCGATCACGTTGCTG
TTCAAGACGCGCGACCGCGTGCTGGTCTGGCAGAAGGGTGTCGTGAAATGGTAG

Upstream 100 bases:

>100_bases
GCTGCGCTCAAGCAGGAACTGAGAGCCTATGCCGACGACCTCAAGGTCGTCTCCGTCTTCAAGCCGAGCACCGACACCAA
CAAATTCGCTGAGCGCATCT

Downstream 100 bases:

>100_bases
CCGCAGCCGAAGTCGTGCGGCCGCAATTTCCCGGCGCGGCGATCGACATTGCCCATGTCGACCATGCCTTCGACATCGAC
GGCGCCGAGCTGAAGGTGCT

Product: putative alkanesulfonate ABC transporter permease

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSTFSLSETAGGDIARATGLGAKLRDIAPGIAAALAWALFGASCFVREDVGDWSRTTDLAVAAFVIAALVLVSSIAALRL
GRAGAALRRRSPWLLALGVFLTLWELATAKFAWLPLPFFPPPQAIIEVYTDDLPKLLDSVVASIKLQLGGYAIGAAIGFV
TGVSIGWSTRIGYWVHPVLRFIGPVPATAWLPIAFFTFPTSWSASTFLIALATGFPVTVLTWSGVASVPTAYYDVARTLG
ARPWFLVLKVAIPAALPHVFVGLFMGLGASFAVLVIAEMIGVKAGLGWYLQWAQGWAAYANMYAALLVMSLLCSGAITLL
FKTRDRVLVWQKGVVKW

Sequences:

>Translated_337_residues
MSTFSLSETAGGDIARATGLGAKLRDIAPGIAAALAWALFGASCFVREDVGDWSRTTDLAVAAFVIAALVLVSSIAALRL
GRAGAALRRRSPWLLALGVFLTLWELATAKFAWLPLPFFPPPQAIIEVYTDDLPKLLDSVVASIKLQLGGYAIGAAIGFV
TGVSIGWSTRIGYWVHPVLRFIGPVPATAWLPIAFFTFPTSWSASTFLIALATGFPVTVLTWSGVASVPTAYYDVARTLG
ARPWFLVLKVAIPAALPHVFVGLFMGLGASFAVLVIAEMIGVKAGLGWYLQWAQGWAAYANMYAALLVMSLLCSGAITLL
FKTRDRVLVWQKGVVKW
>Mature_336_residues
STFSLSETAGGDIARATGLGAKLRDIAPGIAAALAWALFGASCFVREDVGDWSRTTDLAVAAFVIAALVLVSSIAALRLG
RAGAALRRRSPWLLALGVFLTLWELATAKFAWLPLPFFPPPQAIIEVYTDDLPKLLDSVVASIKLQLGGYAIGAAIGFVT
GVSIGWSTRIGYWVHPVLRFIGPVPATAWLPIAFFTFPTSWSASTFLIALATGFPVTVLTWSGVASVPTAYYDVARTLGA
RPWFLVLKVAIPAALPHVFVGLFMGLGASFAVLVIAEMIGVKAGLGWYLQWAQGWAAYANMYAALLVMSLLCSGAITLLF
KTRDRVLVWQKGVVKW

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=209, Percent_Identity=32.5358851674641, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87081802, Length=215, Percent_Identity=28.8372093023256, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36008; Mature: 35877

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFSLSETAGGDIARATGLGAKLRDIAPGIAAALAWALFGASCFVREDVGDWSRTTDLA
CCCCCCCCCCCCCHHHHHCCCCHHHHHCHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHH
VAAFVIAALVLVSSIAALRLGRAGAALRRRSPWLLALGVFLTLWELATAKFAWLPLPFFP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCC
PPQAIIEVYTDDLPKLLDSVVASIKLQLGGYAIGAAIGFVTGVSIGWSTRIGYWVHPVLR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FIGPVPATAWLPIAFFTFPTSWSASTFLIALATGFPVTVLTWSGVASVPTAYYDVARTLG
HHCCCCCHHHHHHHEEECCCCCCCHHEEEEEECCCCEEEEEECCHHHCCHHHHHHHHHHC
ARPWFLVLKVAIPAALPHVFVGLFMGLGASFAVLVIAEMIGVKAGLGWYLQWAQGWAAYA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NMYAALLVMSLLCSGAITLLFKTRDRVLVWQKGVVKW
HHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCC
>Mature Secondary Structure 
STFSLSETAGGDIARATGLGAKLRDIAPGIAAALAWALFGASCFVREDVGDWSRTTDLA
CCCCCCCCCCCCHHHHHCCCCHHHHHCHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHH
VAAFVIAALVLVSSIAALRLGRAGAALRRRSPWLLALGVFLTLWELATAKFAWLPLPFFP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCC
PPQAIIEVYTDDLPKLLDSVVASIKLQLGGYAIGAAIGFVTGVSIGWSTRIGYWVHPVLR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FIGPVPATAWLPIAFFTFPTSWSASTFLIALATGFPVTVLTWSGVASVPTAYYDVARTLG
HHCCCCCHHHHHHHEEECCCCCCCHHEEEEEECCCCEEEEEECCHHHCCHHHHHHHHHHC
ARPWFLVLKVAIPAALPHVFVGLFMGLGASFAVLVIAEMIGVKAGLGWYLQWAQGWAAYA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NMYAALLVMSLLCSGAITLLFKTRDRVLVWQKGVVKW
HHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA