| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340705
Identifier: 146340705
GI number: 146340705
Start: 3922875
End: 3924491
Strand: Direct
Name: 146340705
Synonym: BRADO3757
Alternate gene names: NA
Gene position: 3922875-3924491 (Clockwise)
Preceding gene: 146340702
Following gene: 146340708
Centisome position: 52.61
GC content: 66.48
Gene sequence:
>1617_bases CTGAAATCCCTTCGTACGCCGCTGGCGCTTCTGCTCATATCCTTGGGTGTCATCGCCGCGGCCTGGTGGTGGCTGGCCAA GCCCATCACGCTTGCCCGCGCGCCGATCGAGCTCGATTCGAAGGTGCAGTGCGTGTCCTACGCGCCGTTCCGCGGCCAGC AGAGCCCGCTCGACCCGACCACCCATATCGACGCCGAGCAGATCGAGCAGGATCTGGTGCAACTCGCCAAGATCTCCGAA TGCGTGCGCACCTATTCGATCGAGAACGGCCTCGACCAGGTGCCGGCGATCGCCGCCCGCGTCGGCATCAAGGTCATTCA GGGCATCTGGCTCGGCTCGAACAAGATCAAGAACCAGCAGCAGATCGGCATCGCCGTCGACCTGATCAAGCGCTATCCGC AGGTGATCACCGGCGTCGTGGTCGGCAATGAGGTGCTGCTGCGCGGCGAGATGACGACGGCCGACCTCGCCGCCACCATC CGCAGCGTCAAGGGGCAGGTCCAGGTGCCCGTCACCTATGCCGACGTCTGGGAATACTGGCTGCGCAACCGCGAGCTCTA CGACATCGTCGACTTCGTGACCGTGCACATCCTGCCTTATTGGGAGGACATGCCGGTGCGCGCCAAATTCGCCGCCTCGC ATGTCGACACCATCCGCCAGCAGGTCGGCGTCGCGTTTCCCGGCAAGGAGATCCTGATCGGCGAGACCGGCTGGCCGAGC GAAGGACGGATGCGCGAGGGCGCACTGCCGTCGCGCGCCAACCAGGCGCGCGTGGTGTCGGAGATCCTCAGCCTCGCCAA GCGCGAGAATTTCCGCGTCAACCTGATCGAGGCCTATGACCAGCCCTGGAAGCGCAAGCTCGAGGGCACGGTCGGCGGCT ATTGGGGCCTGATCAGCGACGACACGCGGGCGCTGAAATATCCGCCCGGTGAGCCGGTCAGCAACTACCCGCAGTGGAAG CTGCAGATGGCGGCCGGCATGATCCTGTCCTTCATCGTATTCCTGGCCGGCTGGCTGACGGTGCGCCGCCGGCCCTGGCC GCCGCACGTCTCGGCCTGGATCGGGGTCGGCATATCAGCGACGACGGCGGGCGTGCTGTTCGGCATGGCCGCGGACAAGA TGTATTACGAGAGCCTCGGCTTCGGCGGCTGGCTGCAATGGGGCGCGCTGCTCGCCGCCGGCGTTCTGGCGCCGATCCTG GCCGCCAATGCCGCCATGGCCGGCCGACCGTTGCCGACCTTCCTTGACCTGCTAGGCCCGGATGACGGCCGCAAGCAGCT CAAGATCACCTACGCGCTGGGCCTGGTGCTGATCGTCACGGTGCTGATCGCGGCGCAGACGGCGCTCGGCTTCGTGTTCG ACCCGCGCTATCGCGACTTTCCGTTCGCGAGCTTGACCATGGCGGTGGTGCCGTTCGCAATCCTGCTCGGCAACCGCCCG GCGCAAGGCGGCCGGCCGATCGCGGAGGCGAGCTTCGCCGGCCTGCTCGCGATCTCGTCGCTCTATGTGATCTACAATGA AGGCCGCGACAATTGGCAGGCGCTGTGGACCTGCGTGATGTACCTGACGCTCGCGTTCACGCTGTGGCGGGCGCGGGCCG CGCAAAGCCGAGGATGA
Upstream 100 bases:
>100_bases CCTCGGGGAGCTGCGACATCCCGCCGGTCGCCACCCGATCGCCTACTTGGCAGATCGCCGCCGACCGGGTAATCGACACC TCCCTGCCTGGAGAACGGAA
Downstream 100 bases:
>100_bases GCAGGCCGATCGCCAGGCCCGACAGCACGATATTGTAGAGCACGATGCCGAGGCCTGCGGCGATCAGCCCGCCGGTCAGA AGCACGATCGACGGCCGCAT
Product: putative beta (1-6) glucans synthase, ndvC-like
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycoside Hydrolase Family Protein; Beta Glucan Synthase; Glycosyl Hydrolase; Beta-(1-3)-Glucosyl Transferase; Glycosyltransferase; Family 2 Glycosyl Transferase; Glycoside Hydrolase; Glucan 1 3-Beta-Glucosidase; Glycosyl Transferase Group 2 Family Protein; Beta-(1-3)-Glucosyl Transferase NdvB-Like; Exo-Beta-1 3-Glucanase-Like; Glycosyl Transferase Family 2 Protein; Glycoside Hydrolase Family; Beta Glucans Synthase NdvC-Like; Glucans Synthase; Exo-Beta-1 3-Glucanase-Like Protein; Exo-Beta-1 3-Glucanase; Glycosyl Hydrolases Family; Glucosyl Transferase; Cellulose Synthase Catalytic Subunit
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MKSLRTPLALLLISLGVIAAAWWWLAKPITLARAPIELDSKVQCVSYAPFRGQQSPLDPTTHIDAEQIEQDLVQLAKISE CVRTYSIENGLDQVPAIAARVGIKVIQGIWLGSNKIKNQQQIGIAVDLIKRYPQVITGVVVGNEVLLRGEMTTADLAATI RSVKGQVQVPVTYADVWEYWLRNRELYDIVDFVTVHILPYWEDMPVRAKFAASHVDTIRQQVGVAFPGKEILIGETGWPS EGRMREGALPSRANQARVVSEILSLAKRENFRVNLIEAYDQPWKRKLEGTVGGYWGLISDDTRALKYPPGEPVSNYPQWK LQMAAGMILSFIVFLAGWLTVRRRPWPPHVSAWIGVGISATTAGVLFGMAADKMYYESLGFGGWLQWGALLAAGVLAPIL AANAAMAGRPLPTFLDLLGPDDGRKQLKITYALGLVLIVTVLIAAQTALGFVFDPRYRDFPFASLTMAVVPFAILLGNRP AQGGRPIAEASFAGLLAISSLYVIYNEGRDNWQALWTCVMYLTLAFTLWRARAAQSRG
Sequences:
>Translated_538_residues MKSLRTPLALLLISLGVIAAAWWWLAKPITLARAPIELDSKVQCVSYAPFRGQQSPLDPTTHIDAEQIEQDLVQLAKISE CVRTYSIENGLDQVPAIAARVGIKVIQGIWLGSNKIKNQQQIGIAVDLIKRYPQVITGVVVGNEVLLRGEMTTADLAATI RSVKGQVQVPVTYADVWEYWLRNRELYDIVDFVTVHILPYWEDMPVRAKFAASHVDTIRQQVGVAFPGKEILIGETGWPS EGRMREGALPSRANQARVVSEILSLAKRENFRVNLIEAYDQPWKRKLEGTVGGYWGLISDDTRALKYPPGEPVSNYPQWK LQMAAGMILSFIVFLAGWLTVRRRPWPPHVSAWIGVGISATTAGVLFGMAADKMYYESLGFGGWLQWGALLAAGVLAPIL AANAAMAGRPLPTFLDLLGPDDGRKQLKITYALGLVLIVTVLIAAQTALGFVFDPRYRDFPFASLTMAVVPFAILLGNRP AQGGRPIAEASFAGLLAISSLYVIYNEGRDNWQALWTCVMYLTLAFTLWRARAAQSRG >Mature_538_residues MKSLRTPLALLLISLGVIAAAWWWLAKPITLARAPIELDSKVQCVSYAPFRGQQSPLDPTTHIDAEQIEQDLVQLAKISE CVRTYSIENGLDQVPAIAARVGIKVIQGIWLGSNKIKNQQQIGIAVDLIKRYPQVITGVVVGNEVLLRGEMTTADLAATI RSVKGQVQVPVTYADVWEYWLRNRELYDIVDFVTVHILPYWEDMPVRAKFAASHVDTIRQQVGVAFPGKEILIGETGWPS EGRMREGALPSRANQARVVSEILSLAKRENFRVNLIEAYDQPWKRKLEGTVGGYWGLISDDTRALKYPPGEPVSNYPQWK LQMAAGMILSFIVFLAGWLTVRRRPWPPHVSAWIGVGISATTAGVLFGMAADKMYYESLGFGGWLQWGALLAAGVLAPIL AANAAMAGRPLPTFLDLLGPDDGRKQLKITYALGLVLIVTVLIAAQTALGFVFDPRYRDFPFASLTMAVVPFAILLGNRP AQGGRPIAEASFAGLLAISSLYVIYNEGRDNWQALWTCVMYLTLAFTLWRARAAQSRG
Specific function: Unknown
COG id: COG5309
COG function: function code G; Exo-beta-1,3-glucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321718, Length=274, Percent_Identity=27.3722627737226, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6321721, Length=263, Percent_Identity=24.7148288973384, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321410, Length=263, Percent_Identity=25.0950570342205, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323964, Length=271, Percent_Identity=28.0442804428044, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59358; Mature: 59358
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS00587 GLYCOSYL_HYDROL_F17
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLRTPLALLLISLGVIAAAWWWLAKPITLARAPIELDSKVQCVSYAPFRGQQSPLDPT CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCC THIDAEQIEQDLVQLAKISECVRTYSIENGLDQVPAIAARVGIKVIQGIWLGSNKIKNQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHH QIGIAVDLIKRYPQVITGVVVGNEVLLRGEMTTADLAATIRSVKGQVQVPVTYADVWEYW HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHH LRNRELYDIVDFVTVHILPYWEDMPVRAKFAASHVDTIRQQVGVAFPGKEILIGETGWPS HCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC EGRMREGALPSRANQARVVSEILSLAKRENFRVNLIEAYDQPWKRKLEGTVGGYWGLISD CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHCCCCCCEEEEECC DTRALKYPPGEPVSNYPQWKLQMAAGMILSFIVFLAGWLTVRRRPWPPHVSAWIGVGISA CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHH TTAGVLFGMAADKMYYESLGFGGWLQWGALLAAGVLAPILAANAAMAGRPLPTFLDLLGP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC DDGRKQLKITYALGLVLIVTVLIAAQTALGFVFDPRYRDFPFASLTMAVVPFAILLGNRP CCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCC AQGGRPIAEASFAGLLAISSLYVIYNEGRDNWQALWTCVMYLTLAFTLWRARAAQSRG CCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKSLRTPLALLLISLGVIAAAWWWLAKPITLARAPIELDSKVQCVSYAPFRGQQSPLDPT CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCC THIDAEQIEQDLVQLAKISECVRTYSIENGLDQVPAIAARVGIKVIQGIWLGSNKIKNQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHH QIGIAVDLIKRYPQVITGVVVGNEVLLRGEMTTADLAATIRSVKGQVQVPVTYADVWEYW HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHH LRNRELYDIVDFVTVHILPYWEDMPVRAKFAASHVDTIRQQVGVAFPGKEILIGETGWPS HCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC EGRMREGALPSRANQARVVSEILSLAKRENFRVNLIEAYDQPWKRKLEGTVGGYWGLISD CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHCCCCCCEEEEECC DTRALKYPPGEPVSNYPQWKLQMAAGMILSFIVFLAGWLTVRRRPWPPHVSAWIGVGISA CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHH TTAGVLFGMAADKMYYESLGFGGWLQWGALLAAGVLAPILAANAAMAGRPLPTFLDLLGP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC DDGRKQLKITYALGLVLIVTVLIAAQTALGFVFDPRYRDFPFASLTMAVVPFAILLGNRP CCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCC AQGGRPIAEASFAGLLAISSLYVIYNEGRDNWQALWTCVMYLTLAFTLWRARAAQSRG CCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA