| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340648
Identifier: 146340648
GI number: 146340648
Start: 3860876
End: 3862030
Strand: Direct
Name: 146340648
Synonym: BRADO3696
Alternate gene names: NA
Gene position: 3860876-3862030 (Clockwise)
Preceding gene: 146340646
Following gene: 146340649
Centisome position: 51.78
GC content: 66.58
Gene sequence:
>1155_bases ATGTTCAAATATTTTCCGACCAACTACGTCTGGAATCTGTCGGTCGATCTGGCGATCGAGATGGGCGCCAGGATCGGCGA GATCGAGGAGATGTGCGCGCCGTTGCAGGACGCGGCACGGCAGCCCGACGCCAGCGGCACCCGGGCGTTTCGCGAGACCT GGGCGCGGATGGCGGACAAGCTCTGCGAGCTTGCCGCCGAGGATGAGGCGAAGGGCCGGCTGCTCTCGGCCGGCGAAAAG TATGGCCGCGCTGCGAGCTATCTCATGACCTGCGAGCGTCTGCAGGCGCATGACGCGCCAGGCCGGCTGGCGCTATACCG CAAGTGCCTCGACACCTTCGCCAAGGCAATTGCGCTGGCGCGGGAGAACTGCGAGCGCGTCGAGATCCGCTATGAAGGCA GCCACATCGCGGGCCTCCTGGTGCGCGCGGAAGGCTGTGATGGACCGGCGCCGCTGCTGGTGCAGGTCAACGGCTTGGAC TCGACCAAGGAGATGAAATACCGCGTCGGCCTGCCGGCGTGGCTGGCCAAGCGCGGCGTGGCATCGCTGGTCATCGATCA GCCCGGCTCGGGCGAGGCGCTGCGGCTGCAGGGCCTCACCGCGCGCTACGACAGCGAGCACTGGGCCTCGCGCGTCGTCG ACTGGCTGGAGACGCGCAGCGACGTCGATCCCAGGCGCATCGGCCTCGAGGGAGTATCGCTCGGCGGCTATTACTGCCCG CGCGCCGTGGCGTTCGAGCCGCGCTTCGCCTGCGGCGTCGCCTGGGGCGCCAATCATGACTGGCGCGACGTGCAGAAGAA GCGCCTGCAGAAGGAAGGCAACTTCCCGGTCCCGCACTACTGGGCGCATGTGCGCTGGGTGTGGGGTGCGCGGGATCAGG ACGATTTCATGCGGATCGCCGAGCGGGTTCACCTCGACGGTATCCTCGACCGCATCAAGGTGCCGTTCCTGGTGACGCAT GGCGCCAAGGACTCGCAGATCCCGCTGCATTGGGCGGAGCGGACCTTTGAGCAGCTGGTCAATTCGCCGAAGCGCGAGCT GAAGATCTTCACCGATCGCGAAGGCGGCGCGCAGCATGCGAGCTTCGACAACAGCATCAACGCCGGCCACTACATCGCGG ATTGGGTGGCCGAGACCTTGAACGCGAGACCTTGA
Upstream 100 bases:
>100_bases TTGATAATCAATTTTTCGAAATGGTCAAACGGCGCTACTCCAGATCCCGGGAAGAAACCTCAAGGGGACGCGCGGCCGGT CTGCGCGTCGCGAGTGCAGC
Downstream 100 bases:
>100_bases ACGGAAGGGTCGCCTGAGCGGCAGGCGGAGAGGAAAGCCATGAAAATTTTCGGACTGGAAAGCCTGATCTTCGCTGTCGA CGACGTCAGGGGCGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MFKYFPTNYVWNLSVDLAIEMGARIGEIEEMCAPLQDAARQPDASGTRAFRETWARMADKLCELAAEDEAKGRLLSAGEK YGRAASYLMTCERLQAHDAPGRLALYRKCLDTFAKAIALARENCERVEIRYEGSHIAGLLVRAEGCDGPAPLLVQVNGLD STKEMKYRVGLPAWLAKRGVASLVIDQPGSGEALRLQGLTARYDSEHWASRVVDWLETRSDVDPRRIGLEGVSLGGYYCP RAVAFEPRFACGVAWGANHDWRDVQKKRLQKEGNFPVPHYWAHVRWVWGARDQDDFMRIAERVHLDGILDRIKVPFLVTH GAKDSQIPLHWAERTFEQLVNSPKRELKIFTDREGGAQHASFDNSINAGHYIADWVAETLNARP
Sequences:
>Translated_384_residues MFKYFPTNYVWNLSVDLAIEMGARIGEIEEMCAPLQDAARQPDASGTRAFRETWARMADKLCELAAEDEAKGRLLSAGEK YGRAASYLMTCERLQAHDAPGRLALYRKCLDTFAKAIALARENCERVEIRYEGSHIAGLLVRAEGCDGPAPLLVQVNGLD STKEMKYRVGLPAWLAKRGVASLVIDQPGSGEALRLQGLTARYDSEHWASRVVDWLETRSDVDPRRIGLEGVSLGGYYCP RAVAFEPRFACGVAWGANHDWRDVQKKRLQKEGNFPVPHYWAHVRWVWGARDQDDFMRIAERVHLDGILDRIKVPFLVTH GAKDSQIPLHWAERTFEQLVNSPKRELKIFTDREGGAQHASFDNSINAGHYIADWVAETLNARP >Mature_384_residues MFKYFPTNYVWNLSVDLAIEMGARIGEIEEMCAPLQDAARQPDASGTRAFRETWARMADKLCELAAEDEAKGRLLSAGEK YGRAASYLMTCERLQAHDAPGRLALYRKCLDTFAKAIALARENCERVEIRYEGSHIAGLLVRAEGCDGPAPLLVQVNGLD STKEMKYRVGLPAWLAKRGVASLVIDQPGSGEALRLQGLTARYDSEHWASRVVDWLETRSDVDPRRIGLEGVSLGGYYCP RAVAFEPRFACGVAWGANHDWRDVQKKRLQKEGNFPVPHYWAHVRWVWGARDQDDFMRIAERVHLDGILDRIKVPFLVTH GAKDSQIPLHWAERTFEQLVNSPKRELKIFTDREGGAQHASFDNSINAGHYIADWVAETLNARP
Specific function: L-nicotine is used as a growth substrate. Plays a role in nicotine catabolism by cleaving a C-C bond in 2,6- dihydroxypseudooxyicotine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0255 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010520 [H]
Pfam domain/function: PF06500 DUF1100 [H]
EC number: NA
Molecular weight: Translated: 43265; Mature: 43265
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKYFPTNYVWNLSVDLAIEMGARIGEIEEMCAPLQDAARQPDASGTRAFRETWARMADK CCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LCELAAEDEAKGRLLSAGEKYGRAASYLMTCERLQAHDAPGRLALYRKCLDTFAKAIALA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RENCERVEIRYEGSHIAGLLVRAEGCDGPAPLLVQVNGLDSTKEMKYRVGLPAWLAKRGV HCCCCEEEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHEECCCHHHHHHCCC ASLVIDQPGSGEALRLQGLTARYDSEHWASRVVDWLETRSDVDPRRIGLEGVSLGGYYCP EEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCEECC RAVAFEPRFACGVAWGANHDWRDVQKKRLQKEGNFPVPHYWAHVRWVWGARDQDDFMRIA CCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHH ERVHLDGILDRIKVPFLVTHGAKDSQIPLHWAERTFEQLVNSPKRELKIFTDREGGAQHA HHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCC SFDNSINAGHYIADWVAETLNARP CCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MFKYFPTNYVWNLSVDLAIEMGARIGEIEEMCAPLQDAARQPDASGTRAFRETWARMADK CCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LCELAAEDEAKGRLLSAGEKYGRAASYLMTCERLQAHDAPGRLALYRKCLDTFAKAIALA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RENCERVEIRYEGSHIAGLLVRAEGCDGPAPLLVQVNGLDSTKEMKYRVGLPAWLAKRGV HCCCCEEEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHEECCCHHHHHHCCC ASLVIDQPGSGEALRLQGLTARYDSEHWASRVVDWLETRSDVDPRRIGLEGVSLGGYYCP EEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCEECC RAVAFEPRFACGVAWGANHDWRDVQKKRLQKEGNFPVPHYWAHVRWVWGARDQDDFMRIA CCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHH ERVHLDGILDRIKVPFLVTHGAKDSQIPLHWAERTFEQLVNSPKRELKIFTDREGGAQHA HHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCC SFDNSINAGHYIADWVAETLNARP CCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11514508; 12618462 [H]