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The map label for this gene is yiaN [C]

Identifier: 146340634

GI number: 146340634

Start: 3850017

End: 3851375

Strand: Reverse

Name: yiaN [C]

Synonym: BRADO3682

Alternate gene names: 146340634

Gene position: 3851375-3850017 (Counterclockwise)

Preceding gene: 146340635

Following gene: 146340630

Centisome position: 51.65

GC content: 64.97

Gene sequence:

>1359_bases
ATGAGCGTATTTGGAATTGGAATCGCTTACGGGCTGTCCACCCTGTTTGCGATGTTCGCGGGCATGCCGATCGCGTTCGC
GCTCGGCGCGGTCGCCGTGGTGTTCATGGCGATCTACATGCCAACCGCCTCGCTCGATACGGTGACGCAGAATGTCTACG
AGGAGATGGCGTCGATCACGCTGCTGTCGATCCCGCTGTTCATCCTCAAGGGCGCAGCGATCGGCCGCTCGCGCGCCGGC
CAGGATCTGTACTCGGCGCTGCATGCGTGGCTGCACCGTGTGCCCGGCGGTCTTGGCGTCGCCAATGTGTTCGCCTGCGC
TCTGTTCGCGGCGATGGCCGGATCGTCGCCGGCAACCTGCTCGGCGATCGGCTCCGCCGGCATTCCCGAGATGCGCAAGC
GCGGCTATTCCGGCGGCTTCGCGGCTGGCATCATCGCCGCCGGCGGCACGCTCGGCATCCTCCTGCCGCCGTCGATCACG
ATGATCCTGTTCGCGATCGCGGCCGAGAAGTCGCTCGGACGGCTGTTCCTCGCCGGCATCGGCCCGGGCCTGCTGCTGGT
CACGCTGTTCGGCGTTTACGCCGTGGTGCGCTTCCGTCAGGAATACGCGCAAGCCAAGGCCGCCTATGAGAAGTCGGGCG
CCTGGTCGGACATCCTGACCAAGGACGATTTCACCATGGCGCAGCGCTTCTCGGTGCTGCCGCGCGTGATTCCCTTCGTG
CTGCTGCTGACCGGCGTGATGGTCGCGCTGTATGGCGGCTTCGCCACGCCGTCGGAGACGGCGGGCCTCGGCGGCATACT
GGCGTTGGTGCTGATCGCGATCATCTACCGGGTGTGGACCCCGAGCGATCTGGCGCCGATCATGCGGGCGACGCTGCGGG
AATCGACGATGCTGATGCTGATCATCGGCATGTCGCTGCTCTACTCCTATGTGATGAGCTATCTGCACATCTCCCAGTCG
GTTGCCGAGTCGATCGTGGCGATGCACCTGCCGCGCTGGGAGCTGCTGTTCGCGATCCTGCTGATGGTGGTCGTGCTCGG
CTTCTTCCTGCCGCCGGTCTCGATCATCCTGATGACCGCCCCGATCATCCTGCCGCCGCTGCGGGCGGCGAATTTCGACA
TCATCTGGTTCGGCGTCGTCATGACGATCGTAATGGAGATGGGCCTGATCCACCCGCCGGTGGGGCTGAACATCTTCGTC
ATCCGCAACGTCGCGCCGGACATCCCGCTGCGCGACGTGATCTGGGGCACGCTACCATTCGTGCTCCTGATGATGGCCGC
GGTTCTGCTGCTCTGCTTCGTTCCCCAGATCTCGACCGGCCTGCCGAACCTCGTGATGGGACCGGATCTGAGCCGCTGA

Upstream 100 bases:

>100_bases
CGCCGCTCGCCATTCCCTACGGCTTGATGGCTGCCGGCATGACCCTGCTGTGTATTCAGATGCTGCTGCAGATCCTGTCG
CCGCTCTCCGGAGCGCGTCG

Downstream 100 bases:

>100_bases
CACGGCTGGCGAATGGCGAATAGGGAGTAGCGAATAGATTGGCGAGGGGGCAGGCCCCTATTCGCTACTCGCCATTCGCT
ACTCGCCTGTTCTTCGCATT

Product: putative TRAP-type C4-dicarboxylate transport system large permease component DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSVFGIGIAYGLSTLFAMFAGMPIAFALGAVAVVFMAIYMPTASLDTVTQNVYEEMASITLLSIPLFILKGAAIGRSRAG
QDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATCSAIGSAGIPEMRKRGYSGGFAAGIIAAGGTLGILLPPSIT
MILFAIAAEKSLGRLFLAGIGPGLLLVTLFGVYAVVRFRQEYAQAKAAYEKSGAWSDILTKDDFTMAQRFSVLPRVIPFV
LLLTGVMVALYGGFATPSETAGLGGILALVLIAIIYRVWTPSDLAPIMRATLRESTMLMLIIGMSLLYSYVMSYLHISQS
VAESIVAMHLPRWELLFAILLMVVVLGFFLPPVSIILMTAPIILPPLRAANFDIIWFGVVMTIVMEMGLIHPPVGLNIFV
IRNVAPDIPLRDVIWGTLPFVLLMMAAVLLLCFVPQISTGLPNLVMGPDLSR

Sequences:

>Translated_452_residues
MSVFGIGIAYGLSTLFAMFAGMPIAFALGAVAVVFMAIYMPTASLDTVTQNVYEEMASITLLSIPLFILKGAAIGRSRAG
QDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATCSAIGSAGIPEMRKRGYSGGFAAGIIAAGGTLGILLPPSIT
MILFAIAAEKSLGRLFLAGIGPGLLLVTLFGVYAVVRFRQEYAQAKAAYEKSGAWSDILTKDDFTMAQRFSVLPRVIPFV
LLLTGVMVALYGGFATPSETAGLGGILALVLIAIIYRVWTPSDLAPIMRATLRESTMLMLIIGMSLLYSYVMSYLHISQS
VAESIVAMHLPRWELLFAILLMVVVLGFFLPPVSIILMTAPIILPPLRAANFDIIWFGVVMTIVMEMGLIHPPVGLNIFV
IRNVAPDIPLRDVIWGTLPFVLLMMAAVLLLCFVPQISTGLPNLVMGPDLSR
>Mature_451_residues
SVFGIGIAYGLSTLFAMFAGMPIAFALGAVAVVFMAIYMPTASLDTVTQNVYEEMASITLLSIPLFILKGAAIGRSRAGQ
DLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATCSAIGSAGIPEMRKRGYSGGFAAGIIAAGGTLGILLPPSITM
ILFAIAAEKSLGRLFLAGIGPGLLLVTLFGVYAVVRFRQEYAQAKAAYEKSGAWSDILTKDDFTMAQRFSVLPRVIPFVL
LLTGVMVALYGGFATPSETAGLGGILALVLIAIIYRVWTPSDLAPIMRATLRESTMLMLIIGMSLLYSYVMSYLHISQSV
AESIVAMHLPRWELLFAILLMVVVLGFFLPPVSIILMTAPIILPPLRAANFDIIWFGVVMTIVMEMGLIHPPVGLNIFVI
RNVAPDIPLRDVIWGTLPFVLLMMAAVLLLCFVPQISTGLPNLVMGPDLSR

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=429, Percent_Identity=27.039627039627, Blast_Score=112, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 48210; Mature: 48079

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVFGIGIAYGLSTLFAMFAGMPIAFALGAVAVVFMAIYMPTASLDTVTQNVYEEMASIT
CEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLSIPLFILKGAAIGRSRAGQDLYSALHAWLHRVPGGLGVANVFACALFAAMAGSSPATC
HHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH
SAIGSAGIPEMRKRGYSGGFAAGIIAAGGTLGILLPPSITMILFAIAAEKSLGRLFLAGI
HHHCCCCCCHHHHCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
GPGLLLVTLFGVYAVVRFRQEYAQAKAAYEKSGAWSDILTKDDFTMAQRFSVLPRVIPFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
LLLTGVMVALYGGFATPSETAGLGGILALVLIAIIYRVWTPSDLAPIMRATLRESTMLML
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IIGMSLLYSYVMSYLHISQSVAESIVAMHLPRWELLFAILLMVVVLGFFLPPVSIILMTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIILPPLRAANFDIIWFGVVMTIVMEMGLIHPPVGLNIFVIRNVAPDIPLRDVIWGTLPF
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
VLLMMAAVLLLCFVPQISTGLPNLVMGPDLSR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]