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The map label for this gene is kstR2 [H]

Identifier: 146340630

GI number: 146340630

Start: 3844430

End: 3845074

Strand: Reverse

Name: kstR2 [H]

Synonym: BRADO3678

Alternate gene names: 146340630

Gene position: 3845074-3844430 (Counterclockwise)

Preceding gene: 146340634

Following gene: 146340629

Centisome position: 51.57

GC content: 65.58

Gene sequence:

>645_bases
ATGGCGCGCACGATCGGGTCGCATGGTCCGACGACGATGGAGGCCATCCGCAAGGCCGGCCTGCGGCTGATCTTCGAGCA
TGGCTACGAGGCGATGAGCCTGCGTCAGCTCGCGGCCGAGGTCGGCATCCAGCCTGGCTCCCTTTATAATCACATCAGCA
CCAAGCAGGAGCTGCTCTCCGAGCTGATCCAGGACCATATCAACGATCTGCTCAGCGAGCTGGAGCAGGCGTTGCACGAC
AAGGAGGGCCCCGTCGAGCGTCTCAGGGCGTTCGTCGCCTTTCATGTCAGCTATCACATGACCCGCAAGCGCGAAGTCTT
CATCGCCAATTCCGAGCTGCGCAGCCTCGAGCCGCGCAACTATCAGGCGGTGGTGGCGCTGCGCGGCGCCTATGAGCGGC
GGCTGGCGGAGATTCTCGCCGATGGCGTGGCGCAGGGCGTATTCGACGTCGACGACGTCCAGGTCGCGACCTTCGCAATC
ATCGCGCTTCTGACGGGGTTGTGCAGCTGGTATCGCCCCGGCGGTCGCCTCACGAAGGACGCCATCATCGCCGCGCATGA
GAAGCTCGTGCTGTCCGGCGTCATGCCGCACCGCGTGACCTCGCGACCGAACGGCGCCGGCGGTCCGGCCGACGCACAGG
TCTAG

Upstream 100 bases:

>100_bases
TTGACCCTGTTGAGAAGACGAGTGTTTTTGTACTCAGACAACGAGCGCGCGTCGCCTGTCGCCTCCGGCGGCGCGTTCCG
GCCAGTCCGGCGAGGTTAGC

Downstream 100 bases:

>100_bases
CGGCGATGGCGGAGCGGCCCGACGTCGACGTCATCGACCGCAGGATCCTGGCGGAGCTCCAGGCCGACGGCCGCATCCGC
ATCAACGAGCTCGCCGACCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MARTIGSHGPTTMEAIRKAGLRLIFEHGYEAMSLRQLAAEVGIQPGSLYNHISTKQELLSELIQDHINDLLSELEQALHD
KEGPVERLRAFVAFHVSYHMTRKREVFIANSELRSLEPRNYQAVVALRGAYERRLAEILADGVAQGVFDVDDVQVATFAI
IALLTGLCSWYRPGGRLTKDAIIAAHEKLVLSGVMPHRVTSRPNGAGGPADAQV

Sequences:

>Translated_214_residues
MARTIGSHGPTTMEAIRKAGLRLIFEHGYEAMSLRQLAAEVGIQPGSLYNHISTKQELLSELIQDHINDLLSELEQALHD
KEGPVERLRAFVAFHVSYHMTRKREVFIANSELRSLEPRNYQAVVALRGAYERRLAEILADGVAQGVFDVDDVQVATFAI
IALLTGLCSWYRPGGRLTKDAIIAAHEKLVLSGVMPHRVTSRPNGAGGPADAQV
>Mature_213_residues
ARTIGSHGPTTMEAIRKAGLRLIFEHGYEAMSLRQLAAEVGIQPGSLYNHISTKQELLSELIQDHINDLLSELEQALHDK
EGPVERLRAFVAFHVSYHMTRKREVFIANSELRSLEPRNYQAVVALRGAYERRLAEILADGVAQGVFDVDDVQVATFAII
ALLTGLCSWYRPGGRLTKDAIIAAHEKLVLSGVMPHRVTSRPNGAGGPADAQV

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23561; Mature: 23430

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTIGSHGPTTMEAIRKAGLRLIFEHGYEAMSLRQLAAEVGIQPGSLYNHISTKQELLS
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ELIQDHINDLLSELEQALHDKEGPVERLRAFVAFHVSYHMTRKREVFIANSELRSLEPRN
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHCCCCC
YQAVVALRGAYERRLAEILADGVAQGVFDVDDVQVATFAIIALLTGLCSWYRPGGRLTKD
CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AIIAAHEKLVLSGVMPHRVTSRPNGAGGPADAQV
HHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARTIGSHGPTTMEAIRKAGLRLIFEHGYEAMSLRQLAAEVGIQPGSLYNHISTKQELLS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ELIQDHINDLLSELEQALHDKEGPVERLRAFVAFHVSYHMTRKREVFIANSELRSLEPRN
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHCCCCC
YQAVVALRGAYERRLAEILADGVAQGVFDVDDVQVATFAIIALLTGLCSWYRPGGRLTKD
CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AIIAAHEKLVLSGVMPHRVTSRPNGAGGPADAQV
HHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA