| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340627
Identifier: 146340627
GI number: 146340627
Start: 3842188
End: 3843345
Strand: Reverse
Name: 146340627
Synonym: BRADO3675
Alternate gene names: NA
Gene position: 3843345-3842188 (Counterclockwise)
Preceding gene: 146340629
Following gene: 146340626
Centisome position: 51.54
GC content: 62.35
Gene sequence:
>1158_bases ATGAAAATCAATGCCACGCTGCCCGAGAGAGGGCGCGACCTGCGGCTCGACCTGTTTCGCGGGATCGCCAACTGGGCGAT CTTCCTCGACCACATCCCCGACAACGTCGTGAACTGGATCACGACCCGGAATTACGGCTTCAGCGACGCCGCCGACCTGT TCGTCTTCATCTCCGGCTACACCGCCTCCTTCGTGTACGCCCGCATGATGATCGACCGCGGCTTCATCGTCGGCGCCACA CGCTTGTTCAAGCGGGTGTGGCAGCTCTACGTCGCCCACATCGTTCTGTTCGTCATCTACATCGTGGCGATCAGCTATCT CGCGACCCGCTTCGGCGTCTCCGAGATCATCGACGAGTTCAACGTCGCGGGCCTGGTGGACCACGCCAGCGACACCTTGG CGCAGGGCCTGATCCTGAAGTTCAAGCCGGTGAATCTGGACGTGCTGCCGCTCTACATCGTGCTGATGGGGTTCTTCCCG CCGGTGCTGTGGATGATGCTGCGCCAGCCCGACCTGACGATGATCGCGTCGATCGTGCTGTGGCTCCTCGCGCGGCAGAT GGGGTGGAATTTCGCCGCCTATCCGGCCGGCACCTGGTACTTCAATCCGTATTGCTGGCAGGTGCTGTTCGTGTTCGGCT CGTGGTGCGCGCTGGGCGGCGCACGACGGTCGATGGGCATTATCATGGCGCCGGCGACGCTCTACTTCTGTCTTGCCTAT ATGCTGTTCGCGCTGGTGATGACCATGGCCGGCCGCTTCCCCGACTTCGGGGCGATGTTTCCGCATTGGCTGTTTTCGGC GTTCAATCCGAACGACAAGACCAACCTGGCGCCCTATCGTTTCCTGCACTTCGTCGTCATCGTCATTCTGGTGATCCGCT TCGTGCCGAAGGAGTGGTCAGGCCTGGAGTGGAAGGGCTTTGATCCGCTCGTGGTCTGCGGCCAGCAGTCACTGGCCGTG TTCTGCGTCGGCGTGTTCCTGTCCTTCATCGGCCACTTCACCCTGATGCTGAGCTCTGGCTCGCTGCTGGCGCAGGTCCT GGTCAGCGCAGCCGGGATCGCCATCATGACCACGGTGGCCTATTACATCTCGTGGTCGAAGCGGCAGGACAAGCCGCTGC CAAAGCCGGCCGCACCGAAACCGGCCGCGACGGCGTGA
Upstream 100 bases:
>100_bases GTATAGTCATTCTGCCGTCCCGTGACAATCTCGCTCGACTGCCACGGCGCCTTCCTGCTCCCCGGACGTTTTCCATTCAA AACAGTGCGTTGAAGCGGCC
Downstream 100 bases:
>100_bases GCCCGCCCCTGGCGAGGCGCTCGCAAGGCGCCTTGCCCGTTGACCTGCATCAAGCCCGGCCTGAGCCGGCCTCGCTATGG TTCTCAGCACAAGGTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Transmembrane Protein OpgC
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MKINATLPERGRDLRLDLFRGIANWAIFLDHIPDNVVNWITTRNYGFSDAADLFVFISGYTASFVYARMMIDRGFIVGAT RLFKRVWQLYVAHIVLFVIYIVAISYLATRFGVSEIIDEFNVAGLVDHASDTLAQGLILKFKPVNLDVLPLYIVLMGFFP PVLWMMLRQPDLTMIASIVLWLLARQMGWNFAAYPAGTWYFNPYCWQVLFVFGSWCALGGARRSMGIIMAPATLYFCLAY MLFALVMTMAGRFPDFGAMFPHWLFSAFNPNDKTNLAPYRFLHFVVIVILVIRFVPKEWSGLEWKGFDPLVVCGQQSLAV FCVGVFLSFIGHFTLMLSSGSLLAQVLVSAAGIAIMTTVAYYISWSKRQDKPLPKPAAPKPAATA
Sequences:
>Translated_385_residues MKINATLPERGRDLRLDLFRGIANWAIFLDHIPDNVVNWITTRNYGFSDAADLFVFISGYTASFVYARMMIDRGFIVGAT RLFKRVWQLYVAHIVLFVIYIVAISYLATRFGVSEIIDEFNVAGLVDHASDTLAQGLILKFKPVNLDVLPLYIVLMGFFP PVLWMMLRQPDLTMIASIVLWLLARQMGWNFAAYPAGTWYFNPYCWQVLFVFGSWCALGGARRSMGIIMAPATLYFCLAY MLFALVMTMAGRFPDFGAMFPHWLFSAFNPNDKTNLAPYRFLHFVVIVILVIRFVPKEWSGLEWKGFDPLVVCGQQSLAV FCVGVFLSFIGHFTLMLSSGSLLAQVLVSAAGIAIMTTVAYYISWSKRQDKPLPKPAAPKPAATA >Mature_385_residues MKINATLPERGRDLRLDLFRGIANWAIFLDHIPDNVVNWITTRNYGFSDAADLFVFISGYTASFVYARMMIDRGFIVGAT RLFKRVWQLYVAHIVLFVIYIVAISYLATRFGVSEIIDEFNVAGLVDHASDTLAQGLILKFKPVNLDVLPLYIVLMGFFP PVLWMMLRQPDLTMIASIVLWLLARQMGWNFAAYPAGTWYFNPYCWQVLFVFGSWCALGGARRSMGIIMAPATLYFCLAY MLFALVMTMAGRFPDFGAMFPHWLFSAFNPNDKTNLAPYRFLHFVVIVILVIRFVPKEWSGLEWKGFDPLVVCGQQSLAV FCVGVFLSFIGHFTLMLSSGSLLAQVLVSAAGIAIMTTVAYYISWSKRQDKPLPKPAAPKPAATA
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43398; Mature: 43398
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINATLPERGRDLRLDLFRGIANWAIFLDHIPDNVVNWITTRNYGFSDAADLFVFISGY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHEECCH TASFVYARMMIDRGFIVGATRLFKRVWQLYVAHIVLFVIYIVAISYLATRFGVSEIIDEF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH NVAGLVDHASDTLAQGLILKFKPVNLDVLPLYIVLMGFFPPVLWMMLRQPDLTMIASIVL CHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH WLLARQMGWNFAAYPAGTWYFNPYCWQVLFVFGSWCALGGARRSMGIIMAPATLYFCLAY HHHHHHHCCCEEECCCCCCEECHHHHHHHHHHHHHHHHCCHHHHCCEEECHHHHHHHHHH MLFALVMTMAGRFPDFGAMFPHWLFSAFNPNDKTNLAPYRFLHFVVIVILVIRFVPKEWS HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GLEWKGFDPLVVCGQQSLAVFCVGVFLSFIGHFTLMLSSGSLLAQVLVSAAGIAIMTTVA CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YYISWSKRQDKPLPKPAAPKPAATA HHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKINATLPERGRDLRLDLFRGIANWAIFLDHIPDNVVNWITTRNYGFSDAADLFVFISGY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHEECCH TASFVYARMMIDRGFIVGATRLFKRVWQLYVAHIVLFVIYIVAISYLATRFGVSEIIDEF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH NVAGLVDHASDTLAQGLILKFKPVNLDVLPLYIVLMGFFPPVLWMMLRQPDLTMIASIVL CHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH WLLARQMGWNFAAYPAGTWYFNPYCWQVLFVFGSWCALGGARRSMGIIMAPATLYFCLAY HHHHHHHCCCEEECCCCCCEECHHHHHHHHHHHHHHHHCCHHHHCCEEECHHHHHHHHHH MLFALVMTMAGRFPDFGAMFPHWLFSAFNPNDKTNLAPYRFLHFVVIVILVIRFVPKEWS HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GLEWKGFDPLVVCGQQSLAVFCVGVFLSFIGHFTLMLSSGSLLAQVLVSAAGIAIMTTVA CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YYISWSKRQDKPLPKPAAPKPAATA HHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA