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The map label for this gene is HupA [C]

Identifier: 146340621

GI number: 146340621

Start: 3837315

End: 3837617

Strand: Direct

Name: HupA [C]

Synonym: BRADO3667

Alternate gene names: 146340621

Gene position: 3837315-3837617 (Clockwise)

Preceding gene: 146340617

Following gene: 146340622

Centisome position: 51.46

GC content: 62.05

Gene sequence:

>303_bases
ATGGCTACCCAACTCTCGAAGTCGCAACTCATCGAGAAGATCGCGACCACCACCGAGCTGTCCAAGCGTGACGTCAAGAA
CGTCATGGAGACGCTCACCGATGTCGGCCACAAGGAGCTGAAGAAGAACGGCGTGTTCCTGGTGCCGGGCTTCGCGAAGT
TCGTCGTCGTCAAGAAGGCGGCCGTCAAGGCGCGCAAGGGTACGAACCCCTTCACCGGTGAAGAGATGATGTTCAAGGCC
AAGCCGGCCCGCAAGATCGTGCGCGCCCGCCCGGTCAAGGCCGCCAAGGACGCGGTGGCCTGA

Upstream 100 bases:

>100_bases
GTGCAATGCAGCCAGAAAACCCCGACCAGTCTGCGCAGCAATGCGCTGATAGCCGCGCAGTCGTCACGTCAATCACCGGT
AACAATCATAAGGAGACACG

Downstream 100 bases:

>100_bases
TCCAGCTTCGGCAGGTTGATGGTTTGCGAGGGCCCCCTGCAAAGGGGGCCTTTTCGTTTGATGGGGGACGGCCACGTGTT
GGCGCTTTACAGCCGCTGAA

Product: DNA-binding protein HU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MATQLSKSQLIEKIATTTELSKRDVKNVMETLTDVGHKELKKNGVFLVPGFAKFVVVKKAAVKARKGTNPFTGEEMMFKA
KPARKIVRARPVKAAKDAVA

Sequences:

>Translated_100_residues
MATQLSKSQLIEKIATTTELSKRDVKNVMETLTDVGHKELKKNGVFLVPGFAKFVVVKKAAVKARKGTNPFTGEEMMFKA
KPARKIVRARPVKAAKDAVA
>Mature_99_residues
ATQLSKSQLIEKIATTTELSKRDVKNVMETLTDVGHKELKKNGVFLVPGFAKFVVVKKAAVKARKGTNPFTGEEMMFKAK
PARKIVRARPVKAAKDAVA

Specific function: Histone-Like DNA-Binding Protein Which Is Capable Of Wrapping DNA To Stabilize It, And Thus To Prevent Its Denaturation Under Extreme Environmental Conditions. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 860 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). 2040 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10970; Mature: 10839

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQLSKSQLIEKIATTTELSKRDVKNVMETLTDVGHKELKKNGVFLVPGFAKFVVVKKA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCHHHHHHHHHH
AVKARKGTNPFTGEEMMFKAKPARKIVRARPVKAAKDAVA
HHHHHCCCCCCCCCHHHHHCCHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure 
ATQLSKSQLIEKIATTTELSKRDVKNVMETLTDVGHKELKKNGVFLVPGFAKFVVVKKA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCHHHHHHHHHH
AVKARKGTNPFTGEEMMFKAKPARKIVRARPVKAAKDAVA
HHHHHCCCCCCCCCHHHHHCCHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA