| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yliJ [H]
Identifier: 146340618
GI number: 146340618
Start: 3835119
End: 3835760
Strand: Reverse
Name: yliJ [H]
Synonym: BRADO3663
Alternate gene names: 146340618
Gene position: 3835760-3835119 (Counterclockwise)
Preceding gene: 146340619
Following gene: 146340615
Centisome position: 51.44
GC content: 66.36
Gene sequence:
>642_bases GTGCCCGCCGCAACGCAACTGACGATCTGGGGACGCCCCAACTCTGTCAACGTGCAGAAGGTGCTGTGGTGTCTTGCCGA GCTCGATCTTGGCTTTCACCGCATCGATGCCGGCATGCAGTTCGGCCGCAACAACGAGGCGGACTACCTCGCGATGAATC CGAACGGCCGCATCCCGACGCTGGTCGATGGCGACTTCGTACTATGGGAGAGCAACGCGATCATGCGCTATCTCTGCCTC GCCTATGGTGGCGACACCCTGCTCTATCCGGCGCGGCCGCGAGACCGCGCTGCCGTCGAGCGCTGGCTCGACTGGACGCT CTCGACCGTTCAGCCGACCGAGCGGCCGCTGTTCTGGGGTCTGGTGCGCACCCCGCCTGAGCAGCGCGATATGGCCGCGC TGCAGCAGGCCGCTGACGGCGCCGCGATGATGTGGCGCATCCTCGACGCCCACCTGGCCACACGTACCTATGTCGAGGCG GACAGCTTCACGCTTGCCGACATCGCGCTCGGCGCCTATGCGCGGCGCTGGTTCGGCGTCGAGGGTGTGATCAAGCCGGA GCTGGCGAACCTGATGCGCTGGTACGCGCAAATTGCGCAGCGGCCGGCCTTCATCCGCCACATCGCGCCGCCGCTATCGT AA
Upstream 100 bases:
>100_bases GCGACGCGTTCGACCGAAAAGCCCCGCCGGAAGCGGGGCTTTTTGCGTGCGATGCGCTATCAAGATCGTCGGAGAATGCT CGGCATGAGAGGAGTCCGAT
Downstream 100 bases:
>100_bases ACGTCAGCGGCCGGTCGACGTGCCCATATCGAGGCGCAGCGCCCCGCCGACTTTCACGCAGGTGTCGGTGCCTTCGACGC GCACGAAGTTGGCGCCGTAG
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPAATQLTIWGRPNSVNVQKVLWCLAELDLGFHRIDAGMQFGRNNEADYLAMNPNGRIPTLVDGDFVLWESNAIMRYLCL AYGGDTLLYPARPRDRAAVERWLDWTLSTVQPTERPLFWGLVRTPPEQRDMAALQQAADGAAMMWRILDAHLATRTYVEA DSFTLADIALGAYARRWFGVEGVIKPELANLMRWYAQIAQRPAFIRHIAPPLS
Sequences:
>Translated_213_residues MPAATQLTIWGRPNSVNVQKVLWCLAELDLGFHRIDAGMQFGRNNEADYLAMNPNGRIPTLVDGDFVLWESNAIMRYLCL AYGGDTLLYPARPRDRAAVERWLDWTLSTVQPTERPLFWGLVRTPPEQRDMAALQQAADGAAMMWRILDAHLATRTYVEA DSFTLADIALGAYARRWFGVEGVIKPELANLMRWYAQIAQRPAFIRHIAPPLS >Mature_212_residues PAATQLTIWGRPNSVNVQKVLWCLAELDLGFHRIDAGMQFGRNNEADYLAMNPNGRIPTLVDGDFVLWESNAIMRYLCLA YGGDTLLYPARPRDRAAVERWLDWTLSTVQPTERPLFWGLVRTPPEQRDMAALQQAADGAAMMWRILDAHLATRTYVEAD SFTLADIALGAYARRWFGVEGVIKPELANLMRWYAQIAQRPAFIRHIAPPLS
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4504187, Length=136, Percent_Identity=32.3529411764706, Blast_Score=64, Evalue=8e-11, Organism=Homo sapiens, GI124249394, Length=136, Percent_Identity=32.3529411764706, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI87081789, Length=209, Percent_Identity=44.0191387559809, Blast_Score=159, Evalue=1e-40, Organism=Drosophila melanogaster, GI28571670, Length=175, Percent_Identity=30.2857142857143, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI17864594, Length=191, Percent_Identity=28.7958115183246, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI85725204, Length=185, Percent_Identity=29.7297297297297, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI17737923, Length=185, Percent_Identity=29.7297297297297, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI17864592, Length=185, Percent_Identity=29.1891891891892, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI17864596, Length=197, Percent_Identity=28.9340101522843, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI17864598, Length=156, Percent_Identity=33.974358974359, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24654975, Length=206, Percent_Identity=29.6116504854369, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24646249, Length=192, Percent_Identity=28.6458333333333, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI45549270, Length=152, Percent_Identity=30.2631578947368, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24646259, Length=181, Percent_Identity=30.3867403314917, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI221378983, Length=181, Percent_Identity=30.3867403314917, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI24654983, Length=206, Percent_Identity=25.2427184466019, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI24654965, Length=209, Percent_Identity=29.6650717703349, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI20130115, Length=170, Percent_Identity=27.0588235294118, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646251, Length=185, Percent_Identity=28.6486486486486, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI19922532, Length=172, Percent_Identity=26.7441860465116, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI17933730, Length=156, Percent_Identity=31.4102564102564, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922526, Length=175, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 24130; Mature: 23999
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAATQLTIWGRPNSVNVQKVLWCLAELDLGFHRIDAGMQFGRNNEADYLAMNPNGRIPT CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCE LVDGDFVLWESNAIMRYLCLAYGGDTLLYPARPRDRAAVERWLDWTLSTVQPTERPLFWG EECCCEEEEECCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE LVRTPPEQRDMAALQQAADGAAMMWRILDAHLATRTYVEADSFTLADIALGAYARRWFGV ECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHCC EGVIKPELANLMRWYAQIAQRPAFIRHIAPPLS CCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCC >Mature Secondary Structure PAATQLTIWGRPNSVNVQKVLWCLAELDLGFHRIDAGMQFGRNNEADYLAMNPNGRIPT CCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCE LVDGDFVLWESNAIMRYLCLAYGGDTLLYPARPRDRAAVERWLDWTLSTVQPTERPLFWG EECCCEEEEECCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE LVRTPPEQRDMAALQQAADGAAMMWRILDAHLATRTYVEADSFTLADIALGAYARRWFGV ECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHCC EGVIKPELANLMRWYAQIAQRPAFIRHIAPPLS CCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]