Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146340582

Identifier: 146340582

GI number: 146340582

Start: 3807022

End: 3808347

Strand: Direct

Name: 146340582

Synonym: BRADO3627

Alternate gene names: NA

Gene position: 3807022-3808347 (Clockwise)

Preceding gene: 146340581

Following gene: 146340583

Centisome position: 51.06

GC content: 65.31

Gene sequence:

>1326_bases
ATGGGACTTCGTTCCGGCCTTGGATGGGCGCTGCGCGGCATGGCCAGCGTGCTCGATAGCGCGATGGACCATAGCGACGT
CTGGGGCGAGCATTGGTGGGGCGGCGGATATCCCTCGATCGCGGGCGTCGTCGTCAACGATGAGCGCGTGTCGCAGCTCG
CGGCCGTGCAGTCGGTGCGCCAGGGCTTGTCCTCGGCGATGTCATCGCTGCCGGTGACGGTGTTCCGCAAGGGCGCAGAC
GGCGCGCGCGAGGCGCTGCCGCAGCATCCGATTTCCCGGCTGCTCGGCTGCCGTCCGAATGCGCGCCAGACCCCGGCCGA
ATTCATCGGCGAGCTGGCGTGGCATGTCTCGTACTATCGCAACGGCTATTGCCGCGTCATTCCGGGCGAACCCGGCGCCG
ATGACTACGCGGCCGGCTCGCTGGAGATCCTGCATCCCAAGCGCTTTGCCAAGCTGGAGCGCGGCATCGACGGGCATCTG
TACTACACGTTCAATCCGCCGCGGACGATCGTGCAGGGCGCTCAGATCGCGACCGAGACCTATCGCGACGACGAGATCTG
GCACATTCGCGGTAACCCGCTGCAGGAGGACGGGCTGCTCGGCGAGCCGATCTGGGCAACCGCCAAGCAAGTGTTTGCCC
GTGCCATCGCCGTGCACGAATACGGCGACATCTGGTTTGCGAACAACGGCCAGTCCGGCGGCGTGATCAAGCATCCCGGC
ACGTTCAAGGACAAGGCCGATCGCGACGTGTTTCTCGACAATTGGCGCGCGATGGGCACCGGACGCAACCGGCATCGCGA
CCGTCTACTGACCCATGGCGTCGATTACACGCCTATCAAGGTCACCAACGCCGAGGCGCAGCTGCTGGAGACCGAGAAGG
CCAGCGACATCGACGTGTTTGGCCTGTGGTCCTATCCGCCGCACCTTGCCGGCCGGCTCGATCGGGCGACGTTCTCGAAC
ATCGAACAGCAGTCGCTGAATTTCGTCGTCTACTGCCTGGCGCCGCTTGCCATTGCGATCGAGCAGGGCGCCGAGCGCGA
TTTCCTCGGCGGCCAGGATGCGGAGCTGTTCATCGAATTCAACTTCGCCGGACTGCTGCGCGGGGACCTGCTGAATCGCT
ATCGCGCCTATCTGATCGGCCGACAGGGCGAATGGCTCTCGGCGAACGACATCCGGCGCTTCGAAAACATGTCGCCGCGC
ACGGATGAAGGCGGCGACGACTACACCAATCCGCAGACCAAGAGCGGGGCGGCTGGCGCGGCCGATGGCGCCGGCAGCGA
TGACGGCGACGGTGCCGACAACGAGAACAAGCCGAGCAAGGATTGA

Upstream 100 bases:

>100_bases
TCGACCCGCTGATCGCGCTGCTGCAGGCCACGATCCTGATGAGCTGGAATCCTCAAGCCGGTCTGCTGGTGACCGGCTCC
GACATCCTGATGGTGGTCTG

Downstream 100 bases:

>100_bases
GCGCCATGGCGAAGGACAAGCACCTGCAGAAGGTCATCGCGCAGATCTCCGCGATCGACCCCGTTGTGGCGCTCGATTTG
GAGGCGCTGACCGGCTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: HK97 Family Phage Portal Protein; Portal Protein; Phage Portal Protein HK; Head Portal Protein; HK97 Family Portal Protein; HK97 Family Portal Protein ; Phage Capsid Protein HK; Prophage; Phage-Like Protein; Portal V; Phage-Related Protein

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MGLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVRQGLSSAMSSLPVTVFRKGAD
GAREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYRNGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHL
YYTFNPPRTIVQGAQIATETYRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPG
TFKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVFGLWSYPPHLAGRLDRATFSN
IEQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEFNFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPR
TDEGGDDYTNPQTKSGAAGAADGAGSDDGDGADNENKPSKD

Sequences:

>Translated_441_residues
MGLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVRQGLSSAMSSLPVTVFRKGAD
GAREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYRNGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHL
YYTFNPPRTIVQGAQIATETYRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPG
TFKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVFGLWSYPPHLAGRLDRATFSN
IEQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEFNFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPR
TDEGGDDYTNPQTKSGAAGAADGAGSDDGDGADNENKPSKD
>Mature_440_residues
GLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVRQGLSSAMSSLPVTVFRKGADG
AREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYRNGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHLY
YTFNPPRTIVQGAQIATETYRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPGT
FKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVFGLWSYPPHLAGRLDRATFSNI
EQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEFNFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPRT
DEGGDDYTNPQTKSGAAGAADGAGSDDGDGADNENKPSKD

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48562; Mature: 48430

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVR
CCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH
QGLSSAMSSLPVTVFRKGADGAREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYR
HHHHHHHHHCCEEEEECCCCHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
NGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHLYYTFNPPRTIVQGAQIATET
CCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCEEEEEECCCHHHHHCCHHHHHH
YRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPG
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEECCCCCCCEEECCC
TFKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVF
CCCCCCCCCEECCCCEECCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCEEE
GLWSYPPHLAGRLDRATFSNIEQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEF
EECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
NFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPRTDEGGDDYTNPQTKSGAAGA
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
ADGAGSDDGDGADNENKPSKD
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVR
CCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH
QGLSSAMSSLPVTVFRKGADGAREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYR
HHHHHHHHHCCEEEEECCCCHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
NGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHLYYTFNPPRTIVQGAQIATET
CCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCEEEEEECCCHHHHHCCHHHHHH
YRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPG
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEECCCCCCCEEECCC
TFKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVF
CCCCCCCCCEECCCCEECCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCEEE
GLWSYPPHLAGRLDRATFSNIEQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEF
EECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
NFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPRTDEGGDDYTNPQTKSGAAGA
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
ADGAGSDDGDGADNENKPSKD
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA