| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340582
Identifier: 146340582
GI number: 146340582
Start: 3807022
End: 3808347
Strand: Direct
Name: 146340582
Synonym: BRADO3627
Alternate gene names: NA
Gene position: 3807022-3808347 (Clockwise)
Preceding gene: 146340581
Following gene: 146340583
Centisome position: 51.06
GC content: 65.31
Gene sequence:
>1326_bases ATGGGACTTCGTTCCGGCCTTGGATGGGCGCTGCGCGGCATGGCCAGCGTGCTCGATAGCGCGATGGACCATAGCGACGT CTGGGGCGAGCATTGGTGGGGCGGCGGATATCCCTCGATCGCGGGCGTCGTCGTCAACGATGAGCGCGTGTCGCAGCTCG CGGCCGTGCAGTCGGTGCGCCAGGGCTTGTCCTCGGCGATGTCATCGCTGCCGGTGACGGTGTTCCGCAAGGGCGCAGAC GGCGCGCGCGAGGCGCTGCCGCAGCATCCGATTTCCCGGCTGCTCGGCTGCCGTCCGAATGCGCGCCAGACCCCGGCCGA ATTCATCGGCGAGCTGGCGTGGCATGTCTCGTACTATCGCAACGGCTATTGCCGCGTCATTCCGGGCGAACCCGGCGCCG ATGACTACGCGGCCGGCTCGCTGGAGATCCTGCATCCCAAGCGCTTTGCCAAGCTGGAGCGCGGCATCGACGGGCATCTG TACTACACGTTCAATCCGCCGCGGACGATCGTGCAGGGCGCTCAGATCGCGACCGAGACCTATCGCGACGACGAGATCTG GCACATTCGCGGTAACCCGCTGCAGGAGGACGGGCTGCTCGGCGAGCCGATCTGGGCAACCGCCAAGCAAGTGTTTGCCC GTGCCATCGCCGTGCACGAATACGGCGACATCTGGTTTGCGAACAACGGCCAGTCCGGCGGCGTGATCAAGCATCCCGGC ACGTTCAAGGACAAGGCCGATCGCGACGTGTTTCTCGACAATTGGCGCGCGATGGGCACCGGACGCAACCGGCATCGCGA CCGTCTACTGACCCATGGCGTCGATTACACGCCTATCAAGGTCACCAACGCCGAGGCGCAGCTGCTGGAGACCGAGAAGG CCAGCGACATCGACGTGTTTGGCCTGTGGTCCTATCCGCCGCACCTTGCCGGCCGGCTCGATCGGGCGACGTTCTCGAAC ATCGAACAGCAGTCGCTGAATTTCGTCGTCTACTGCCTGGCGCCGCTTGCCATTGCGATCGAGCAGGGCGCCGAGCGCGA TTTCCTCGGCGGCCAGGATGCGGAGCTGTTCATCGAATTCAACTTCGCCGGACTGCTGCGCGGGGACCTGCTGAATCGCT ATCGCGCCTATCTGATCGGCCGACAGGGCGAATGGCTCTCGGCGAACGACATCCGGCGCTTCGAAAACATGTCGCCGCGC ACGGATGAAGGCGGCGACGACTACACCAATCCGCAGACCAAGAGCGGGGCGGCTGGCGCGGCCGATGGCGCCGGCAGCGA TGACGGCGACGGTGCCGACAACGAGAACAAGCCGAGCAAGGATTGA
Upstream 100 bases:
>100_bases TCGACCCGCTGATCGCGCTGCTGCAGGCCACGATCCTGATGAGCTGGAATCCTCAAGCCGGTCTGCTGGTGACCGGCTCC GACATCCTGATGGTGGTCTG
Downstream 100 bases:
>100_bases GCGCCATGGCGAAGGACAAGCACCTGCAGAAGGTCATCGCGCAGATCTCCGCGATCGACCCCGTTGTGGCGCTCGATTTG GAGGCGCTGACCGGCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: HK97 Family Phage Portal Protein; Portal Protein; Phage Portal Protein HK; Head Portal Protein; HK97 Family Portal Protein; HK97 Family Portal Protein ; Phage Capsid Protein HK; Prophage; Phage-Like Protein; Portal V; Phage-Related Protein
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MGLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVRQGLSSAMSSLPVTVFRKGAD GAREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYRNGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHL YYTFNPPRTIVQGAQIATETYRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPG TFKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVFGLWSYPPHLAGRLDRATFSN IEQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEFNFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPR TDEGGDDYTNPQTKSGAAGAADGAGSDDGDGADNENKPSKD
Sequences:
>Translated_441_residues MGLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVRQGLSSAMSSLPVTVFRKGAD GAREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYRNGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHL YYTFNPPRTIVQGAQIATETYRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPG TFKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVFGLWSYPPHLAGRLDRATFSN IEQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEFNFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPR TDEGGDDYTNPQTKSGAAGAADGAGSDDGDGADNENKPSKD >Mature_440_residues GLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVRQGLSSAMSSLPVTVFRKGADG AREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYRNGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHLY YTFNPPRTIVQGAQIATETYRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPGT FKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVFGLWSYPPHLAGRLDRATFSNI EQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEFNFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPRT DEGGDDYTNPQTKSGAAGAADGAGSDDGDGADNENKPSKD
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48562; Mature: 48430
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVR CCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH QGLSSAMSSLPVTVFRKGADGAREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYR HHHHHHHHHCCEEEEECCCCHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH NGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHLYYTFNPPRTIVQGAQIATET CCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCEEEEEECCCHHHHHCCHHHHHH YRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPG CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEECCCCCCCEEECCC TFKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVF CCCCCCCCCEECCCCEECCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCEEE GLWSYPPHLAGRLDRATFSNIEQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEF EECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE NFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPRTDEGGDDYTNPQTKSGAAGA CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC ADGAGSDDGDGADNENKPSKD CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLRSGLGWALRGMASVLDSAMDHSDVWGEHWWGGGYPSIAGVVVNDERVSQLAAVQSVR CCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH QGLSSAMSSLPVTVFRKGADGAREALPQHPISRLLGCRPNARQTPAEFIGELAWHVSYYR HHHHHHHHHCCEEEEECCCCHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH NGYCRVIPGEPGADDYAAGSLEILHPKRFAKLERGIDGHLYYTFNPPRTIVQGAQIATET CCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCEEEEEECCCHHHHHCCHHHHHH YRDDEIWHIRGNPLQEDGLLGEPIWATAKQVFARAIAVHEYGDIWFANNGQSGGVIKHPG CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEECCCCCCCEEECCC TFKDKADRDVFLDNWRAMGTGRNRHRDRLLTHGVDYTPIKVTNAEAQLLETEKASDIDVF CCCCCCCCCEECCCCEECCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCEEE GLWSYPPHLAGRLDRATFSNIEQQSLNFVVYCLAPLAIAIEQGAERDFLGGQDAELFIEF EECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE NFAGLLRGDLLNRYRAYLIGRQGEWLSANDIRRFENMSPRTDEGGDDYTNPQTKSGAAGA CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC ADGAGSDDGDGADNENKPSKD CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA