Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146340581

Identifier: 146340581

GI number: 146340581

Start: 3805283

End: 3807022

Strand: Direct

Name: 146340581

Synonym: BRADO3626

Alternate gene names: NA

Gene position: 3805283-3807022 (Clockwise)

Preceding gene: 146340579

Following gene: 146340582

Centisome position: 51.03

GC content: 65.29

Gene sequence:

>1740_bases
TTGAGCTTCCCGCGCGACAAGAGTTGCTGGGACACCTCCTGCCCAGATTGGGAAGATCGCATCCGCAACGGGCGCTCGCT
GCTGCCGGATCTGCCGTTGTTCGCCGATGAGGCCGACATGGGGCTGGCGTTCTTCGACGAGCTGAAGCTGCCGGACGTGC
CGGGGACGCCGCGCCTCGGCGATGCCGCCGGCCAATGGTTCCGCGACCTGGTCCGCGCCGTGTTCGGCTCCTGGGATCCG
GTCAACAGGGTCCGCATGATCCGCGATTTCTTCGCGCTCGTGCCGAAAGGATCGTCGAAAACGACCTATTCGGCGGCGCT
GATGATCGTCGCGATGCTGATGAATTTCCGGCCGCGTGGCACCGCGCTGTTTCTCGGCGAGACGCAGGCCGTCGCCGATC
GCGCCTATGAGCAGGCGGTCGGCATGATCGAGGAATCGCCGGATCTGCGGCGCCGCTTCAAGCCGCGTGACTACGACAAG
ACGATCGAGGACCTGGTCACCAAGTCCGAGATCATGATCGCGAGCTTCGATCTGAAGATCCTGACCGGCGCGATGGCTCT
CATCTTCGTTCTGCTCGACGAGCTGCACCTGCTCGGCAAGCGCGCGCACACCTCGCGCGTGCTGCGCCAGATCCGCGGCG
GTCTCGACAAGACCGAGGAGGGCGTGCTGGTCATCACCACGACGCAGAGCGATGAGGCGCCGGCCGGCGCGTTCAAGAGC
GAGCTGAAATTCGTTCGGAACGTGCGCGACGGCCTCTACCGGGGCAAGATCATCCGTCCGACCTTGCCGCTGCTTTACGA
ACTGCCTCGCGACATCGCGACATTGACGCGCGAGGAACGCAAGCACGGCGTCGAGCCGCGCTGGATGGATCCCGCCGTCT
GGCCGATGGTCATGCCGAACATCAACCGTCCCATCACGGTCGCGTCGATGCTGGCCGATTTTGCCAGCGAGCGCGAGAAG
GGTGCGGACGCCGTCAGCGTTTGGGCCTCGCAGCATCTTAATATCGAGATCGGCACCGGCACGAACGACGACGGCTGGTC
CGGCGCCGATCTTTGGGACGCGCAGGCTGACGAGACGCTCGATTTGGAGGCGCTTCTGGAGCGCTCCGAGGTGGTCGTGA
TCGGCGTCGACGGTGGCGGCCGCGATGATCTGCTCGGCCTGGCCGTTATGGGCCGCGAGAAGGGCACGCGCCATTGGCTG
TCCGTCTGTTACGGCTGGGCCGATCCGATCGTGCTGGAGCGGCGCAAAGAAATTGCCGCGCATCTCGACGACTTCGAGAA
GGAGGGGACGTTCTCGATCCTTCCGGTCGCCGAGGCGCTGGCCGAGCTGACCAGTCTCGTCGCCTGCATCAAGGCGTCGG
GCCTGTTGCCTGAAAAAAACGCGGTCGGCATCGATCCGAACCGCGCCGCGGCGCTGTTCGAAGCGCTGTTCGCGGGTGGC
ATTACCGAGGACATGATCCGCCGGCTGCTGCAGGGCCCGGCGCTCGCGCCCGCGGTGTACGGCCTCGATCTCAAGCTCGC
CGATGGGACGTATTTCCACGCCGACCAGGCGCTGATGACCTGGGTCGTTGGCAACGCCAAGGTTGAGCAGCGCGGCAACG
CCGACATGATCACCAAGCAGGTCGCCGGGCGCGCCAAGATCGACCCGCTGATCGCGCTGCTGCAGGCCACGATCCTGATG
AGCTGGAATCCTCAAGCCGGTCTGCTGGTGACCGGCTCCGACATCCTGATGGTGGTCTGA

Upstream 100 bases:

>100_bases
CGACCTAACTGTTGGATCAGACAGGTTAAGATCGCCCGATATGGTGCGATAGTAGTCGAAAAAGAATCCGAATCAAACTC
AACCTCTGGAGGGGCTGCTG

Downstream 100 bases:

>100_bases
TGGGACTTCGTTCCGGCCTTGGATGGGCGCTGCGCGGCATGGCCAGCGTGCTCGATAGCGCGATGGACCATAGCGACGTC
TGGGGCGAGCATTGGTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Terminase; Phage Terminase Large Subunit; Phage Terminase-Like Protein Large Subunit; Phage Terminase Family Protein; Large Subunit Phage Terminase

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MSFPRDKSCWDTSCPDWEDRIRNGRSLLPDLPLFADEADMGLAFFDELKLPDVPGTPRLGDAAGQWFRDLVRAVFGSWDP
VNRVRMIRDFFALVPKGSSKTTYSAALMIVAMLMNFRPRGTALFLGETQAVADRAYEQAVGMIEESPDLRRRFKPRDYDK
TIEDLVTKSEIMIASFDLKILTGAMALIFVLLDELHLLGKRAHTSRVLRQIRGGLDKTEEGVLVITTTQSDEAPAGAFKS
ELKFVRNVRDGLYRGKIIRPTLPLLYELPRDIATLTREERKHGVEPRWMDPAVWPMVMPNINRPITVASMLADFASEREK
GADAVSVWASQHLNIEIGTGTNDDGWSGADLWDAQADETLDLEALLERSEVVVIGVDGGGRDDLLGLAVMGREKGTRHWL
SVCYGWADPIVLERRKEIAAHLDDFEKEGTFSILPVAEALAELTSLVACIKASGLLPEKNAVGIDPNRAAALFEALFAGG
ITEDMIRRLLQGPALAPAVYGLDLKLADGTYFHADQALMTWVVGNAKVEQRGNADMITKQVAGRAKIDPLIALLQATILM
SWNPQAGLLVTGSDILMVV

Sequences:

>Translated_579_residues
MSFPRDKSCWDTSCPDWEDRIRNGRSLLPDLPLFADEADMGLAFFDELKLPDVPGTPRLGDAAGQWFRDLVRAVFGSWDP
VNRVRMIRDFFALVPKGSSKTTYSAALMIVAMLMNFRPRGTALFLGETQAVADRAYEQAVGMIEESPDLRRRFKPRDYDK
TIEDLVTKSEIMIASFDLKILTGAMALIFVLLDELHLLGKRAHTSRVLRQIRGGLDKTEEGVLVITTTQSDEAPAGAFKS
ELKFVRNVRDGLYRGKIIRPTLPLLYELPRDIATLTREERKHGVEPRWMDPAVWPMVMPNINRPITVASMLADFASEREK
GADAVSVWASQHLNIEIGTGTNDDGWSGADLWDAQADETLDLEALLERSEVVVIGVDGGGRDDLLGLAVMGREKGTRHWL
SVCYGWADPIVLERRKEIAAHLDDFEKEGTFSILPVAEALAELTSLVACIKASGLLPEKNAVGIDPNRAAALFEALFAGG
ITEDMIRRLLQGPALAPAVYGLDLKLADGTYFHADQALMTWVVGNAKVEQRGNADMITKQVAGRAKIDPLIALLQATILM
SWNPQAGLLVTGSDILMVV
>Mature_578_residues
SFPRDKSCWDTSCPDWEDRIRNGRSLLPDLPLFADEADMGLAFFDELKLPDVPGTPRLGDAAGQWFRDLVRAVFGSWDPV
NRVRMIRDFFALVPKGSSKTTYSAALMIVAMLMNFRPRGTALFLGETQAVADRAYEQAVGMIEESPDLRRRFKPRDYDKT
IEDLVTKSEIMIASFDLKILTGAMALIFVLLDELHLLGKRAHTSRVLRQIRGGLDKTEEGVLVITTTQSDEAPAGAFKSE
LKFVRNVRDGLYRGKIIRPTLPLLYELPRDIATLTREERKHGVEPRWMDPAVWPMVMPNINRPITVASMLADFASEREKG
ADAVSVWASQHLNIEIGTGTNDDGWSGADLWDAQADETLDLEALLERSEVVVIGVDGGGRDDLLGLAVMGREKGTRHWLS
VCYGWADPIVLERRKEIAAHLDDFEKEGTFSILPVAEALAELTSLVACIKASGLLPEKNAVGIDPNRAAALFEALFAGGI
TEDMIRRLLQGPALAPAVYGLDLKLADGTYFHADQALMTWVVGNAKVEQRGNADMITKQVAGRAKIDPLIALLQATILMS
WNPQAGLLVTGSDILMVV

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63912; Mature: 63781

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFPRDKSCWDTSCPDWEDRIRNGRSLLPDLPLFADEADMGLAFFDELKLPDVPGTPRLG
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
DAAGQWFRDLVRAVFGSWDPVNRVRMIRDFFALVPKGSSKTTYSAALMIVAMLMNFRPRG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
TALFLGETQAVADRAYEQAVGMIEESPDLRRRFKPRDYDKTIEDLVTKSEIMIASFDLKI
CEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCEEEEECHHHH
LTGAMALIFVLLDELHLLGKRAHTSRVLRQIRGGLDKTEEGVLVITTTQSDEAPAGAFKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHH
ELKFVRNVRDGLYRGKIIRPTLPLLYELPRDIATLTREERKHGVEPRWMDPAVWPMVMPN
HHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
INRPITVASMLADFASEREKGADAVSVWASQHLNIEIGTGTNDDGWSGADLWDAQADETL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
DLEALLERSEVVVIGVDGGGRDDLLGLAVMGREKGTRHWLSVCYGWADPIVLERRKEIAA
CHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
HLDDFEKEGTFSILPVAEALAELTSLVACIKASGLLPEKNAVGIDPNRAAALFEALFAGG
HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC
ITEDMIRRLLQGPALAPAVYGLDLKLADGTYFHADQALMTWVVGNAKVEQRGNADMITKQ
CHHHHHHHHHCCCCCCHHHCCCEEEECCCCEEECCHHHHHHHHCCCEECCCCCHHHHHHH
VAGRAKIDPLIALLQATILMSWNPQAGLLVTGSDILMVV
HCCCCHHHHHHHHHHHHHHEECCCCCCEEEECCCEEEEC
>Mature Secondary Structure 
SFPRDKSCWDTSCPDWEDRIRNGRSLLPDLPLFADEADMGLAFFDELKLPDVPGTPRLG
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
DAAGQWFRDLVRAVFGSWDPVNRVRMIRDFFALVPKGSSKTTYSAALMIVAMLMNFRPRG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
TALFLGETQAVADRAYEQAVGMIEESPDLRRRFKPRDYDKTIEDLVTKSEIMIASFDLKI
CEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCEEEEECHHHH
LTGAMALIFVLLDELHLLGKRAHTSRVLRQIRGGLDKTEEGVLVITTTQSDEAPAGAFKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHH
ELKFVRNVRDGLYRGKIIRPTLPLLYELPRDIATLTREERKHGVEPRWMDPAVWPMVMPN
HHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
INRPITVASMLADFASEREKGADAVSVWASQHLNIEIGTGTNDDGWSGADLWDAQADETL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
DLEALLERSEVVVIGVDGGGRDDLLGLAVMGREKGTRHWLSVCYGWADPIVLERRKEIAA
CHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
HLDDFEKEGTFSILPVAEALAELTSLVACIKASGLLPEKNAVGIDPNRAAALFEALFAGG
HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC
ITEDMIRRLLQGPALAPAVYGLDLKLADGTYFHADQALMTWVVGNAKVEQRGNADMITKQ
CHHHHHHHHHCCCCCCHHHCCCEEEECCCCEEECCHHHHHHHHCCCEECCCCCHHHHHHH
VAGRAKIDPLIALLQATILMSWNPQAGLLVTGSDILMVV
HCCCCHHHHHHHHHHHHHHEECCCCCCEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA