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The map label for this gene is yfcH [H]

Identifier: 146340236

GI number: 146340236

Start: 3459096

End: 3460532

Strand: Direct

Name: yfcH [H]

Synonym: BRADO3255

Alternate gene names: 146340236

Gene position: 3459096-3460532 (Clockwise)

Preceding gene: 146340235

Following gene: 146340239

Centisome position: 46.39

GC content: 69.03

Gene sequence:

>1437_bases
ATGACGCCGCTGCTCTGGTCCCTGATCGCCCTCCAGGTCGCGATGGGCGTGTTCGACACGTTCTATCACCACGAATTCAC
CGAGCGGCTCGCCTGGCGGCCGTCGCAGCGGGACGAGCTGAAGCTGCATGGCGCGCGCAATCTGCTCTATGCCGTGCTGT
TTGCCGTGCTCGGCTGGTGTGAGCCGAACGGCCTGTTCGCGATAGCAGTCCTCGCGGTGCTTATCGCCGAGATCGCCATC
ACCCTGACCGACTTCGTCGAGGAGGACCTGACGCGCAAGCTGCCGCCGAGCGAACGCATCAATCATACGCTGCTCGCGAT
CAACTACGGCGCCATCCTGATGCTGCTGGTGCCCGTGCTGATCGCCTGGGCGATGCGGCCCTCCGCAATCGTTTTGGCTT
ATGCGGGCTGGCTGAGCTGGATTGCCGCCGCCGCTGCGGTGGGCGCGAGCCTGTGCGGCCTGCGCGACTTCACGGCCGCG
GCGCGACTGGCGCGGATGTCGCAGCCCGATGCGAGCGGACTGGTCGGCGCGCTGCCGCCGGCGCAGACGATCCTCGTCAC
CGGCGCGACCGGGTTCATCGGCGCGCGTCTCGTCGCGAGCCTTACAGCGGCGGGCCATCATGTCATCGCGCTGGTGCGCG
CTCCCGGCCGCGCCGCCGCATTGCCGCCGCCGCTCACCTTGATCACCGGCCTCGATCAGCTCGCCTCCGATACGCGCATC
GACGCAATCGTCAATCTCGCCGGCGAGCCGATCGGCAACGCGCCCTGGACGGCGGCCAAGCGCGCCGCGATCCTGCAGTC
GCGGCTCGCCACGACGGAAGCCGTCGTGGGCCTGATCGCGCGGCTCGATCGCAAGCCGAAGGTTCTGGTCAATGGCTCCG
CCATCGGCTGGTATGGCCTGTGGCAGGACCAGCCGCTGACGGAGTCCGCGAAGTCGCATGCCTGCTTCAGCCACGACCTC
TGCGAAGCCTGGGAGCAGGCGGCCCGAGGTGCGGAGGCGCATGGCGTGCGCGTGGCGCTGTTGCGGATCGGACTCGTCGT
CGGCCGCGACGGCGGTTTCCTGGCGCGGATGCTGACGCCGTTCGAGTTCGGCCTCGGCGGGCCGCTCGGCTCCGGCGCGC
AATGGATGTCGTGGATCGAGCGCGACGATCTCATCCGCCTGATCGCGCATGTCATCGCGACCGACGCGATGGGCGGCCCC
ATTAACGCGACGGCGCCGCTGCCGGTGCGCAATGTCACCTTCACCGCCGAACTCGCGCGTTGTTTGCGGCGTCCGGCCAT
CCTGCGGGTGCCGGCGGGGCTGCTGCGCCGGATCGGCGGCGACTTTGCCGAGGAACTGCTGCTCGGCGGCCAGCGTGTGG
TGCCGAACAAGGCGTTGTCGAGCGGCTTCGTGTTTCGTCATCAGAGCCTGCGCAGCGCGCTCGAATCGGTCCTGTGA

Upstream 100 bases:

>100_bases
CCGATCTCGGCGGCGGTGCCTTCCGCTTCGCGCTCGAGATCGTCCATCCGCGCTTCGGCCGGATCATCCGCCAGAGCGCC
ACGTTCCGGGAGTCCGCACC

Downstream 100 bases:

>100_bases
GATGCGCGCGTCGGTCACCTCCGCTCGGCGCGGGCGATCGTCGCCGACGGCAGTTCGCCGAACGTGGCGCGGTAGTAGCG
CGCGAAATGTCCGGCGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTPLLWSLIALQVAMGVFDTFYHHEFTERLAWRPSQRDELKLHGARNLLYAVLFAVLGWCEPNGLFAIAVLAVLIAEIAI
TLTDFVEEDLTRKLPPSERINHTLLAINYGAILMLLVPVLIAWAMRPSAIVLAYAGWLSWIAAAAAVGASLCGLRDFTAA
ARLARMSQPDASGLVGALPPAQTILVTGATGFIGARLVASLTAAGHHVIALVRAPGRAAALPPPLTLITGLDQLASDTRI
DAIVNLAGEPIGNAPWTAAKRAAILQSRLATTEAVVGLIARLDRKPKVLVNGSAIGWYGLWQDQPLTESAKSHACFSHDL
CEAWEQAARGAEAHGVRVALLRIGLVVGRDGGFLARMLTPFEFGLGGPLGSGAQWMSWIERDDLIRLIAHVIATDAMGGP
INATAPLPVRNVTFTAELARCLRRPAILRVPAGLLRRIGGDFAEELLLGGQRVVPNKALSSGFVFRHQSLRSALESVL

Sequences:

>Translated_478_residues
MTPLLWSLIALQVAMGVFDTFYHHEFTERLAWRPSQRDELKLHGARNLLYAVLFAVLGWCEPNGLFAIAVLAVLIAEIAI
TLTDFVEEDLTRKLPPSERINHTLLAINYGAILMLLVPVLIAWAMRPSAIVLAYAGWLSWIAAAAAVGASLCGLRDFTAA
ARLARMSQPDASGLVGALPPAQTILVTGATGFIGARLVASLTAAGHHVIALVRAPGRAAALPPPLTLITGLDQLASDTRI
DAIVNLAGEPIGNAPWTAAKRAAILQSRLATTEAVVGLIARLDRKPKVLVNGSAIGWYGLWQDQPLTESAKSHACFSHDL
CEAWEQAARGAEAHGVRVALLRIGLVVGRDGGFLARMLTPFEFGLGGPLGSGAQWMSWIERDDLIRLIAHVIATDAMGGP
INATAPLPVRNVTFTAELARCLRRPAILRVPAGLLRRIGGDFAEELLLGGQRVVPNKALSSGFVFRHQSLRSALESVL
>Mature_477_residues
TPLLWSLIALQVAMGVFDTFYHHEFTERLAWRPSQRDELKLHGARNLLYAVLFAVLGWCEPNGLFAIAVLAVLIAEIAIT
LTDFVEEDLTRKLPPSERINHTLLAINYGAILMLLVPVLIAWAMRPSAIVLAYAGWLSWIAAAAAVGASLCGLRDFTAAA
RLARMSQPDASGLVGALPPAQTILVTGATGFIGARLVASLTAAGHHVIALVRAPGRAAALPPPLTLITGLDQLASDTRID
AIVNLAGEPIGNAPWTAAKRAAILQSRLATTEAVVGLIARLDRKPKVLVNGSAIGWYGLWQDQPLTESAKSHACFSHDLC
EAWEQAARGAEAHGVRVALLRIGLVVGRDGGFLARMLTPFEFGLGGPLGSGAQWMSWIERDDLIRLIAHVIATDAMGGPI
NATAPLPVRNVTFTAELARCLRRPAILRVPAGLLRRIGGDFAEELLLGGQRVVPNKALSSGFVFRHQSLRSALESVL

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=305, Percent_Identity=34.0983606557377, Blast_Score=146, Evalue=4e-35,
Organism=Escherichia coli, GI1788642, Length=297, Percent_Identity=42.0875420875421, Blast_Score=231, Evalue=5e-62,
Organism=Drosophila melanogaster, GI28573846, Length=297, Percent_Identity=33.6700336700337, Blast_Score=150, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 51090; Mature: 50959

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLLWSLIALQVAMGVFDTFYHHEFTERLAWRPSQRDELKLHGARNLLYAVLFAVLGWC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
EPNGLFAIAVLAVLIAEIAITLTDFVEEDLTRKLPPSERINHTLLAINYGAILMLLVPVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEHHHHHHHHHHHHH
IAWAMRPSAIVLAYAGWLSWIAAAAAVGASLCGLRDFTAAARLARMSQPDASGLVGALPP
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCC
AQTILVTGATGFIGARLVASLTAAGHHVIALVRAPGRAAALPPPLTLITGLDQLASDTRI
CCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHH
DAIVNLAGEPIGNAPWTAAKRAAILQSRLATTEAVVGLIARLDRKPKVLVNGSAIGWYGL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEC
WQDQPLTESAKSHACFSHDLCEAWEQAARGAEAHGVRVALLRIGLVVGRDGGFLARMLTP
CCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCH
FEFGLGGPLGSGAQWMSWIERDDLIRLIAHVIATDAMGGPINATAPLPVRNVTFTAELAR
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHH
CLRRPAILRVPAGLLRRIGGDFAEELLLGGQRVVPNKALSSGFVFRHQSLRSALESVL
HHCCCCEEECCHHHHHHHCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TPLLWSLIALQVAMGVFDTFYHHEFTERLAWRPSQRDELKLHGARNLLYAVLFAVLGWC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
EPNGLFAIAVLAVLIAEIAITLTDFVEEDLTRKLPPSERINHTLLAINYGAILMLLVPVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEHHHHHHHHHHHHH
IAWAMRPSAIVLAYAGWLSWIAAAAAVGASLCGLRDFTAAARLARMSQPDASGLVGALPP
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCC
AQTILVTGATGFIGARLVASLTAAGHHVIALVRAPGRAAALPPPLTLITGLDQLASDTRI
CCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHH
DAIVNLAGEPIGNAPWTAAKRAAILQSRLATTEAVVGLIARLDRKPKVLVNGSAIGWYGL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEC
WQDQPLTESAKSHACFSHDLCEAWEQAARGAEAHGVRVALLRIGLVVGRDGGFLARMLTP
CCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCH
FEFGLGGPLGSGAQWMSWIERDDLIRLIAHVIATDAMGGPINATAPLPVRNVTFTAELAR
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHH
CLRRPAILRVPAGLLRRIGGDFAEELLLGGQRVVPNKALSSGFVFRHQSLRSALESVL
HHCCCCEEECCHHHHHHHCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]