| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is blh [H]
Identifier: 146340180
GI number: 146340180
Start: 3396591
End: 3397478
Strand: Reverse
Name: blh [H]
Synonym: BRADO3196
Alternate gene names: 146340180
Gene position: 3397478-3396591 (Counterclockwise)
Preceding gene: 146340181
Following gene: 146340179
Centisome position: 45.56
GC content: 63.96
Gene sequence:
>888_bases ATGTCCTATCCGAGCGATCTCCGTGTGCGGCCCAAGGTGGCCGGCTTCTTCGATCCGGACACCAGCACGATCAGCTATGT GGTGAAGGATCCGTCATCGCCGTCCTGTGCGATCATCGATCCCGTCCTCGACATCGACTATGCGGCCGGCCGCCTCGGCA CCCGCTCCGCAGACACGCTGATCGACTATGTCAGGATGAACGATCTGCGGCCGGAATGGCTGATCGAGACGCATGCCCAT GCCGATCATCTCTCGGCCGCGCCCTACATCCAGGACAAGCTCGGCGGCAAGATCGGCATCGGCGAGCACATCCTCACTGT GCAGGAGACATTCGGCAAGGTCTTCAACGAAGGCACCGAGTTTCGCCGCGACGGCAGCCAGTTCGACCGGCTGTTCAAGG ACGGCGACACCTATAAGGTCGGGCAGATGACCGCCTTCACGATGCACACGCCCGGCCACACGCCGGCCTGCGCAACGCAT GTGATGGGCGATGCGGCGTTTGTTGGCGACACCCTGTTCATGCCCGACGGCGGCACGGCGCGGGCGGATTTTCCCGGCGG CGATGCGCGCACGCTGTTTCGGTCGATCCGCCGGATCCTCGAGACGCTGCCGCGCGAGACCCGGCTGTTCATGTGTCACG ATTACGGCCCTGATGGCCGTGAGGTGCGCTGGGAGACGACCGTCGGCGACGAACGCCTTCACAACATTCACGTCCGCGAC GGCATGACCGAGGACGCGTTCGTTGCGCTGCGCGAGTCCCGCGACAAGATGCTGGGCATGCCGCGGCTGATCATTCCCTC GCTGCAGGTGAACATCCGCGCTGGACATCTTCCGCCCGCCGACGACAGCGGAAAGACCTTTCTCAAGGTGCCGATCAACG TGCTGTGA
Upstream 100 bases:
>100_bases CCTGCGGGACGAAGTCGAGCCCGACGTCTTAGACCCGGCAGAATGACAGAGGGCACGGGGCGGCGATGCCGCCCCGGAGC TTCATCGTGGAGCAGCAGCC
Downstream 100 bases:
>100_bases CGATGACGCCGGCAGCATCTTGGTTGCCAGATCACAGCGTCACGAAGATGTCAGTTGCCAAAGACGAGCGCTCCGCGCGA CCTGTCTGCGGTGAAGAAGA
Product: metallo-hydrolase/oxidoreductase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSYPSDLRVRPKVAGFFDPDTSTISYVVKDPSSPSCAIIDPVLDIDYAAGRLGTRSADTLIDYVRMNDLRPEWLIETHAH ADHLSAAPYIQDKLGGKIGIGEHILTVQETFGKVFNEGTEFRRDGSQFDRLFKDGDTYKVGQMTAFTMHTPGHTPACATH VMGDAAFVGDTLFMPDGGTARADFPGGDARTLFRSIRRILETLPRETRLFMCHDYGPDGREVRWETTVGDERLHNIHVRD GMTEDAFVALRESRDKMLGMPRLIIPSLQVNIRAGHLPPADDSGKTFLKVPINVL
Sequences:
>Translated_295_residues MSYPSDLRVRPKVAGFFDPDTSTISYVVKDPSSPSCAIIDPVLDIDYAAGRLGTRSADTLIDYVRMNDLRPEWLIETHAH ADHLSAAPYIQDKLGGKIGIGEHILTVQETFGKVFNEGTEFRRDGSQFDRLFKDGDTYKVGQMTAFTMHTPGHTPACATH VMGDAAFVGDTLFMPDGGTARADFPGGDARTLFRSIRRILETLPRETRLFMCHDYGPDGREVRWETTVGDERLHNIHVRD GMTEDAFVALRESRDKMLGMPRLIIPSLQVNIRAGHLPPADDSGKTFLKVPINVL >Mature_294_residues SYPSDLRVRPKVAGFFDPDTSTISYVVKDPSSPSCAIIDPVLDIDYAAGRLGTRSADTLIDYVRMNDLRPEWLIETHAHA DHLSAAPYIQDKLGGKIGIGEHILTVQETFGKVFNEGTEFRRDGSQFDRLFKDGDTYKVGQMTAFTMHTPGHTPACATHV MGDAAFVGDTLFMPDGGTARADFPGGDARTLFRSIRRILETLPRETRLFMCHDYGPDGREVRWETTVGDERLHNIHVRDG MTEDAFVALRESRDKMLGMPRLIIPSLQVNIRAGHLPPADDSGKTFLKVPINVL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=266, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI1787158, Length=175, Percent_Identity=32, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17538952, Length=257, Percent_Identity=27.2373540856031, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI221330176, Length=262, Percent_Identity=28.2442748091603, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32805; Mature: 32673
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYPSDLRVRPKVAGFFDPDTSTISYVVKDPSSPSCAIIDPVLDIDYAAGRLGTRSADTL CCCCCCCEECCCCCEEECCCCCEEEEEEECCCCCCEEEECCHHCCCHHCCCCCCCHHHHH IDYVRMNDLRPEWLIETHAHADHLSAAPYIQDKLGGKIGIGEHILTVQETFGKVFNEGTE HHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHCCCEECCCHHHHHHHHHHHHHHCCCHH FRRDGSQFDRLFKDGDTYKVGQMTAFTMHTPGHTPACATHVMGDAAFVGDTLFMPDGGTA HHCCHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHHHHHHCCHHHCCCEEECCCCCCE RADFPGGDARTLFRSIRRILETLPRETRLFMCHDYGPDGREVRWETTVGDERLHNIHVRD ECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCHHHEEEEECC GMTEDAFVALRESRDKMLGMPRLIIPSLQVNIRAGHLPPADDSGKTFLKVPINVL CCCHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure SYPSDLRVRPKVAGFFDPDTSTISYVVKDPSSPSCAIIDPVLDIDYAAGRLGTRSADTL CCCCCCEECCCCCEEECCCCCEEEEEEECCCCCCEEEECCHHCCCHHCCCCCCCHHHHH IDYVRMNDLRPEWLIETHAHADHLSAAPYIQDKLGGKIGIGEHILTVQETFGKVFNEGTE HHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHCCCEECCCHHHHHHHHHHHHHHCCCHH FRRDGSQFDRLFKDGDTYKVGQMTAFTMHTPGHTPACATHVMGDAAFVGDTLFMPDGGTA HHCCHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHHHHHHCCHHHCCCEEECCCCCCE RADFPGGDARTLFRSIRRILETLPRETRLFMCHDYGPDGREVRWETTVGDERLHNIHVRD ECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCHHHEEEEECC GMTEDAFVALRESRDKMLGMPRLIIPSLQVNIRAGHLPPADDSGKTFLKVPINVL CCCHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]