| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340177
Identifier: 146340177
GI number: 146340177
Start: 3393207
End: 3393842
Strand: Reverse
Name: 146340177
Synonym: BRADO3193
Alternate gene names: NA
Gene position: 3393842-3393207 (Counterclockwise)
Preceding gene: 146340178
Following gene: 146340161
Centisome position: 45.51
GC content: 65.41
Gene sequence:
>636_bases ATGACCAGGAAGACCTTTGCCGCATCGCTCGCGACGCTGCTGCTGCTCACGGCTGCCATGCTGCCGTTCCAGGCCCGCGC CGAGGATGACGACGGCGACATTCTGAGGGAGGCGCGCATCTTGCGCGATCCCGCTATTCCCGTCCTCGGCAACGCCGATG GCGACATCACGATCGTCGAGTATTTCGACTATCAATGTCCGTATTGCCGCAAGATCAGCCCGGAGCTCGCCAAGGTGGTT CGCGACGACGGTCACGTCCGCCTGATCTTCAAGGACTGGCCGATCTTCGGCGGCCCCTCGATCTACGCCGCACGCATGAC ATTGGCGGCGAAGTACCAGGACAAGTTCGCCGAAGCCCACGAGGCGCTGATCTCGCTCAAGGACAAGCTCTCGGAGGCAA ACGCCGACGCCGCGCTTTCGGCCGCCGGGATCGACCTCGCGCGCGCCAAGGCCGATCTGGCCGCCAAAGGCAGCGAGATC GATGCCGTCCTCGCCCGCAACCACGAGCAGGCCATGGGCCTGGGCTTCCAGGGCACCCCGGCCTTCATCATCGGCCGCTT CCGCGTACCCGGAGCTCCCAACGCGCAGGCCTTCAAGCAGGCCATCGCCGACGCACGAAAAGCGGCGCGGAAGTAA
Upstream 100 bases:
>100_bases CCGCCGGCATCGTGCTGCCCGAACTGCTCACACCGCAGATCGTGCTCGACGCCATCGACACCGCATCGACCATCCCGCCA AAGGAGACCGACAAGACATG
Downstream 100 bases:
>100_bases CGTCCGTCGTCAAACGCGACGCTGGCGTTATGTTCAGCCGATCCGGACCGGCCGCCTAGGCGACCGGACCGCCATGCGCG CGCCAGCGGCTCATGCCGCC
Product: putative disulfide bond formation protein D
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Protein-Disulfide Isomerase; Twin-Arginine Translocation Pathway Signal; 27kDa Outer Membrane Protein; Thioredoxin Domain Protein; 27 KDa Outer Membrane Protein; DSBA-Like Thioredoxin Domain Protein; Disulfide Bond Formation Protein D; Disulfide Oxidoreductase; DsbA Oxidoreductase; ThiolDisulfide Oxidoreductase; Oxidoreductase; DSBA Family Oxidoreductase; BcfH Protein; Dsba-Like Thioredoxin Domain Protein; Disulfide Bonded Thioredoxin Protein; Secreted Copper-Sensitivity Suppressor C; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTRKTFAASLATLLLLTAAMLPFQARAEDDDGDILREARILRDPAIPVLGNADGDITIVEYFDYQCPYCRKISPELAKVV RDDGHVRLIFKDWPIFGGPSIYAARMTLAAKYQDKFAEAHEALISLKDKLSEANADAALSAAGIDLARAKADLAAKGSEI DAVLARNHEQAMGLGFQGTPAFIIGRFRVPGAPNAQAFKQAIADARKAARK
Sequences:
>Translated_211_residues MTRKTFAASLATLLLLTAAMLPFQARAEDDDGDILREARILRDPAIPVLGNADGDITIVEYFDYQCPYCRKISPELAKVV RDDGHVRLIFKDWPIFGGPSIYAARMTLAAKYQDKFAEAHEALISLKDKLSEANADAALSAAGIDLARAKADLAAKGSEI DAVLARNHEQAMGLGFQGTPAFIIGRFRVPGAPNAQAFKQAIADARKAARK >Mature_210_residues TRKTFAASLATLLLLTAAMLPFQARAEDDDGDILREARILRDPAIPVLGNADGDITIVEYFDYQCPYCRKISPELAKVVR DDGHVRLIFKDWPIFGGPSIYAARMTLAAKYQDKFAEAHEALISLKDKLSEANADAALSAAGIDLARAKADLAAKGSEID AVLARNHEQAMGLGFQGTPAFIIGRFRVPGAPNAQAFKQAIADARKAARK
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22829; Mature: 22698
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKTFAASLATLLLLTAAMLPFQARAEDDDGDILREARILRDPAIPVLGNADGDITIVE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEE YFDYQCPYCRKISPELAKVVRDDGHVRLIFKDWPIFGGPSIYAARMTLAAKYQDKFAEAH EECCCCCCHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH EALISLKDKLSEANADAALSAAGIDLARAKADLAAKGSEIDAVLARNHEQAMGLGFQGTP HHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCCCC AFIIGRFRVPGAPNAQAFKQAIADARKAARK EEEEEEEECCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRKTFAASLATLLLLTAAMLPFQARAEDDDGDILREARILRDPAIPVLGNADGDITIVE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEE YFDYQCPYCRKISPELAKVVRDDGHVRLIFKDWPIFGGPSIYAARMTLAAKYQDKFAEAH EECCCCCCHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH EALISLKDKLSEANADAALSAAGIDLARAKADLAAKGSEIDAVLARNHEQAMGLGFQGTP HHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCCCC AFIIGRFRVPGAPNAQAFKQAIADARKAARK EEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA