| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is iorA [H]
Identifier: 146340146
GI number: 146340146
Start: 3363474
End: 3363962
Strand: Reverse
Name: iorA [H]
Synonym: BRADO3161
Alternate gene names: 146340146
Gene position: 3363962-3363474 (Counterclockwise)
Preceding gene: 146340147
Following gene: 146340145
Centisome position: 45.11
GC content: 67.08
Gene sequence:
>489_bases ATGACCCTCACGATCAACGGCCGCGATCACCAGGTGGACGCGGAGCCGGACACGCCGCTGCTCTACGTGCTGCGCGACGA TCTCGCACTCAACGCGGCGAAATATGGCTGCGGGCTAGGCCAATGCGGCGCTTGCACGGTCATGATCGACGGCGAGGCCG TATTCTCCTGCATCACGCCCGTCCTGCTTCTCGCAGGCCGCAAGATCACCACGCTCGAAGGATTGGGCACGGAGGAAGCG CCGGCCCCGATCCAGCGCGCCTTCATCGAAGAGCAGGCCGCGCAATGCGGCTACTGTATCCCGGGCATGATGATGCGCGC GCATGCACTGCTGCAGCGCAATGCCAGCCCGACCGACCTGCAGATCCGCGCCGAGCTGGCGCCGCATCTCTGTCGTTGCG GCACGCACATGCGCATCCTGCGCGCGGTGCATCGGGCCGCGGACATGGTGCGCCGGGCCGATGCCGGCACCGAGGGAGGC AGGTTATGA
Upstream 100 bases:
>100_bases AGACCCTCGCCGGGGCACGCCGGGCACAGGCGAGCTTCCTCCGCACGGCGGCCGAGCCGCCCAACATCAGCATCACCGGG ACGACGCGAGGCCAGCCATG
Downstream 100 bases:
>100_bases CGTCAACTATCACCCTCGATCGTCGTGGCGTCCTGCTCGGCGGCGGCGCCCTGATCGTCAGTTTCGCCCTGCGCGACACC GCCGCGCAGCCGTTACCGGG
Product: putative oxidoreductase subunit protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTLTINGRDHQVDAEPDTPLLYVLRDDLALNAAKYGCGLGQCGACTVMIDGEAVFSCITPVLLLAGRKITTLEGLGTEEA PAPIQRAFIEEQAAQCGYCIPGMMMRAHALLQRNASPTDLQIRAELAPHLCRCGTHMRILRAVHRAADMVRRADAGTEGG RL
Sequences:
>Translated_162_residues MTLTINGRDHQVDAEPDTPLLYVLRDDLALNAAKYGCGLGQCGACTVMIDGEAVFSCITPVLLLAGRKITTLEGLGTEEA PAPIQRAFIEEQAAQCGYCIPGMMMRAHALLQRNASPTDLQIRAELAPHLCRCGTHMRILRAVHRAADMVRRADAGTEGG RL >Mature_161_residues TLTINGRDHQVDAEPDTPLLYVLRDDLALNAAKYGCGLGQCGACTVMIDGEAVFSCITPVLLLAGRKITTLEGLGTEEAP APIQRAFIEEQAAQCGYCIPGMMMRAHALLQRNASPTDLQIRAELAPHLCRCGTHMRILRAVHRAADMVRRADAGTEGGR L
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=154, Percent_Identity=34.4155844155844, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI71773480, Length=150, Percent_Identity=38, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1786480, Length=166, Percent_Identity=35.5421686746988, Blast_Score=112, Evalue=1e-26, Organism=Escherichia coli, GI1789232, Length=142, Percent_Identity=40.8450704225352, Blast_Score=102, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17540638, Length=158, Percent_Identity=37.3417721518987, Blast_Score=106, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17539860, Length=153, Percent_Identity=35.9477124183007, Blast_Score=106, Evalue=5e-24, Organism=Caenorhabditis elegans, GI32566215, Length=153, Percent_Identity=34.640522875817, Blast_Score=104, Evalue=2e-23, Organism=Drosophila melanogaster, GI17737937, Length=152, Percent_Identity=34.8684210526316, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI24647199, Length=154, Percent_Identity=32.4675324675325, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24647201, Length=155, Percent_Identity=31.6129032258064, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI24647197, Length=162, Percent_Identity=32.7160493827161, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24647195, Length=162, Percent_Identity=32.7160493827161, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24647193, Length=160, Percent_Identity=31.25, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17457; Mature: 17325
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTINGRDHQVDAEPDTPLLYVLRDDLALNAAKYGCGLGQCGACTVMIDGEAVFSCITP CEEEECCCCCEECCCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHH VLLLAGRKITTLEGLGTEEAPAPIQRAFIEEQAAQCGYCIPGMMMRAHALLQRNASPTDL HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCE QIRAELAPHLCRCGTHMRILRAVHRAADMVRRADAGTEGGRL EEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TLTINGRDHQVDAEPDTPLLYVLRDDLALNAAKYGCGLGQCGACTVMIDGEAVFSCITP EEEECCCCCEECCCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHH VLLLAGRKITTLEGLGTEEAPAPIQRAFIEEQAAQCGYCIPGMMMRAHALLQRNASPTDL HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCE QIRAELAPHLCRCGTHMRILRAVHRAADMVRRADAGTEGGRL EEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]