| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is iorB [H]
Identifier: 146340145
GI number: 146340145
Start: 3361255
End: 3363477
Strand: Reverse
Name: iorB [H]
Synonym: BRADO3160
Alternate gene names: 146340145
Gene position: 3363477-3361255 (Counterclockwise)
Preceding gene: 146340146
Following gene: 146340143
Centisome position: 45.11
GC content: 67.16
Gene sequence:
>2223_bases ATGACGTCAACTATCACCCTCGATCGTCGTGGCGTCCTGCTCGGCGGCGGCGCCCTGATCGTCAGTTTCGCCCTGCGCGA CACCGCCGCGCAGCCGTTACCGGGTGGCGTGAAGCGGCCGGGCAGCTTGACCGGCGCCCCCTATCTCGACTCCTGGATCC GCATCGATGCCCGCGGCGAGATCACGGTGCTGACCGGCAAGGCGGAGCTCGGCCAGGGCCTCAAGACCGCGCTACGGCAA GTCGCCGCCGAGGAGCTCGACGTGCCCGTCTCAGGATTGAAGCTGGTCACGGCCGATACCGGCCTCACAGCCAATGAGGG CTACACCTCCGGCAGCCATTCGATGCAGGACAGCGGCACCGCGATCCGCAACGCCGCGGCCCAGGCGCGCGCGCTGCTGA TCACCCGGGCGTCGCAGCGACTCAATCTCTCAGCAGATCAGCTGCGAACCGACAGCGGCGCTGTCGTCGCACCAGATGGC ACGCGCATCTCCTATGGCGAGCTTGTCGTCGGCGACACGTTGCATATCGAAGCCGAACCGACCTCGCCACTGAAGGGAAC CGCGCGCTTCACCGCGATGGGCAAGCCGCTGCCGCGCGTGGACATTCCGGCCAAGGTGACTGGCGGCGCTGCCTATGTCC AGGACATGCGTCCGAGCGGCATGTTGCACGCGCGTGTAGTGCGTCCACCCAGCTATGGCGCGCAATTGACAACTCTCGAC AGCGCCGAGGTCGAAGCGATGCCCGGTGTGGTCAAGGTCGTCAGGAACGGCAATTTCCTTGCGGTGGTCGCCGAAAAGGA ATTCCAGGCGATCAGAGCCATGATTGCGCTCGCCGCGCGCAGCCAGTGGCGGGAGAAGGCGAGCTTGCCGGCGCAGGGCG ATCCGCGACAGCTGCTGACCGGCCTGCCCGCACAGGATTCGATCATTCTCAACATCGCCAACCCGGCCGCCGCAACGGGC ACGAGAACACTCGAGGCAAGCTACACGCGCCCCTATCAGGCGCACGGCTCGATCGGCCCGTCCTGCGCGCTGGCGCAGTT CGTGGACGGCGCGATGACTGTGTGGAGCCACACCCAGGGCGTCTTCCCCGACCGCCAGGCGATTGCCGAGATGCTGCAGC TGCCGCCCGACAAGGTTCGCGTCATCCATGCCGAGGGCTCCGGCTGCTACGGCCATAACGGCGCTGATGACGCCGCCGCT GACGCGGCACTGATCGCGCGCGAGCTGCCGGGCCGTCCGATCCGGGTGCAGTGGATGCGCGAGCAGGAGCATGCATGGGA GCCATTCGGCCCGGCCATGCTCACGCAGGCCAAGGCGTCGCTCGATGCCGACGGCAAGATCGCCGACTGGCGGTATGAGG TCTGGAGCAACACCCATTCGATGCGGCCGGGCGGCGCCGGCAGCCTGCTGGCCGCCCAGCACAAGGCCGATCCGGTCGCG GAGCCCGCCCCCAAGCCGCTGCCGCTTCCCGAAGGCGGCGGCGACCGCAACGCGATCCCGATCTACACATTCCCCAACGC CACCGTGACGCACCACTTCATCAAGCAGATGCCGTTGCGCGTCTCGGCGCTGCGCTCGCTCGGCGCCTATCACAACGTGT TCTCGATCGAGAGTTTTATCGACGAGCTCGCGCTGCTGGCGGGCGCTGATCCCGTCGCGTTCCGGCTCAAGCACCTGACG GATGCGCGTGGCCGCGACGTCATCGACAAAGCGGCGAGCGCGTTCGGGTGGAGCCGAGGTGACAAACTCCCGGCCGGACA CGGCCGCGGCTTCGCCTTCGCACGCTACAAGAACCTGGCGGCCTACTGCGCCATAGCCGCTGACGTCGAGGTCAACCGTG ACACGGGTCGCGCGCGACTCGTGCGCGCGGTGGCGGCGGTCGATGCCGGTGAGATCATCAATCCCGACGGTCTCACCAAC CAGATCGAGGGCGGAATCATCCAGTCGATGAGCTGGACGCTGTACGAAAGCGTCACCCATGACGACACGAGAATCACCAG CATCGACTGGCAGAGCTATCCGATCCTGCGCTTCAACTCGGTGCCGGACAGCATTGAGGTGCATCTCATCAACCGCCCGG GCCTGCCGTTTCTCGGTGCGGGCGAGACCGCGCAAGGACCGGCAGCCGCCGCGATCGGCAATGCCGTCGCTCATGCGATC GGCCGCCGGTTGCGTGACCTGCCGCTGACCCGGCAGCGGATCAAGCATGCGATCGAGGCCTGA
Upstream 100 bases:
>100_bases ATCTCTGTCGTTGCGGCACGCACATGCGCATCCTGCGCGCGGTGCATCGGGCCGCGGACATGGTGCGCCGGGCCGATGCC GGCACCGAGGGAGGCAGGTT
Downstream 100 bases:
>100_bases TCTCCAGCCGGATCATCGAACACCGGCTGAACCCGAAGCGGCGCGGTTCAGTTCAGGCCGTCAACGCGCATCGAATTGTC CCGTCACGGTCAATCGCGGA
Product: putative oxidoreductase subunit protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 740; Mature: 739
Protein sequence:
>740_residues MTSTITLDRRGVLLGGGALIVSFALRDTAAQPLPGGVKRPGSLTGAPYLDSWIRIDARGEITVLTGKAELGQGLKTALRQ VAAEELDVPVSGLKLVTADTGLTANEGYTSGSHSMQDSGTAIRNAAAQARALLITRASQRLNLSADQLRTDSGAVVAPDG TRISYGELVVGDTLHIEAEPTSPLKGTARFTAMGKPLPRVDIPAKVTGGAAYVQDMRPSGMLHARVVRPPSYGAQLTTLD SAEVEAMPGVVKVVRNGNFLAVVAEKEFQAIRAMIALAARSQWREKASLPAQGDPRQLLTGLPAQDSIILNIANPAAATG TRTLEASYTRPYQAHGSIGPSCALAQFVDGAMTVWSHTQGVFPDRQAIAEMLQLPPDKVRVIHAEGSGCYGHNGADDAAA DAALIARELPGRPIRVQWMREQEHAWEPFGPAMLTQAKASLDADGKIADWRYEVWSNTHSMRPGGAGSLLAAQHKADPVA EPAPKPLPLPEGGGDRNAIPIYTFPNATVTHHFIKQMPLRVSALRSLGAYHNVFSIESFIDELALLAGADPVAFRLKHLT DARGRDVIDKAASAFGWSRGDKLPAGHGRGFAFARYKNLAAYCAIAADVEVNRDTGRARLVRAVAAVDAGEIINPDGLTN QIEGGIIQSMSWTLYESVTHDDTRITSIDWQSYPILRFNSVPDSIEVHLINRPGLPFLGAGETAQGPAAAAIGNAVAHAI GRRLRDLPLTRQRIKHAIEA
Sequences:
>Translated_740_residues MTSTITLDRRGVLLGGGALIVSFALRDTAAQPLPGGVKRPGSLTGAPYLDSWIRIDARGEITVLTGKAELGQGLKTALRQ VAAEELDVPVSGLKLVTADTGLTANEGYTSGSHSMQDSGTAIRNAAAQARALLITRASQRLNLSADQLRTDSGAVVAPDG TRISYGELVVGDTLHIEAEPTSPLKGTARFTAMGKPLPRVDIPAKVTGGAAYVQDMRPSGMLHARVVRPPSYGAQLTTLD SAEVEAMPGVVKVVRNGNFLAVVAEKEFQAIRAMIALAARSQWREKASLPAQGDPRQLLTGLPAQDSIILNIANPAAATG TRTLEASYTRPYQAHGSIGPSCALAQFVDGAMTVWSHTQGVFPDRQAIAEMLQLPPDKVRVIHAEGSGCYGHNGADDAAA DAALIARELPGRPIRVQWMREQEHAWEPFGPAMLTQAKASLDADGKIADWRYEVWSNTHSMRPGGAGSLLAAQHKADPVA EPAPKPLPLPEGGGDRNAIPIYTFPNATVTHHFIKQMPLRVSALRSLGAYHNVFSIESFIDELALLAGADPVAFRLKHLT DARGRDVIDKAASAFGWSRGDKLPAGHGRGFAFARYKNLAAYCAIAADVEVNRDTGRARLVRAVAAVDAGEIINPDGLTN QIEGGIIQSMSWTLYESVTHDDTRITSIDWQSYPILRFNSVPDSIEVHLINRPGLPFLGAGETAQGPAAAAIGNAVAHAI GRRLRDLPLTRQRIKHAIEA >Mature_739_residues TSTITLDRRGVLLGGGALIVSFALRDTAAQPLPGGVKRPGSLTGAPYLDSWIRIDARGEITVLTGKAELGQGLKTALRQV AAEELDVPVSGLKLVTADTGLTANEGYTSGSHSMQDSGTAIRNAAAQARALLITRASQRLNLSADQLRTDSGAVVAPDGT RISYGELVVGDTLHIEAEPTSPLKGTARFTAMGKPLPRVDIPAKVTGGAAYVQDMRPSGMLHARVVRPPSYGAQLTTLDS AEVEAMPGVVKVVRNGNFLAVVAEKEFQAIRAMIALAARSQWREKASLPAQGDPRQLLTGLPAQDSIILNIANPAAATGT RTLEASYTRPYQAHGSIGPSCALAQFVDGAMTVWSHTQGVFPDRQAIAEMLQLPPDKVRVIHAEGSGCYGHNGADDAAAD AALIARELPGRPIRVQWMREQEHAWEPFGPAMLTQAKASLDADGKIADWRYEVWSNTHSMRPGGAGSLLAAQHKADPVAE PAPKPLPLPEGGGDRNAIPIYTFPNATVTHHFIKQMPLRVSALRSLGAYHNVFSIESFIDELALLAGADPVAFRLKHLTD ARGRDVIDKAASAFGWSRGDKLPAGHGRGFAFARYKNLAAYCAIAADVEVNRDTGRARLVRAVAAVDAGEIINPDGLTNQ IEGGIIQSMSWTLYESVTHDDTRITSIDWQSYPILRFNSVPDSIEVHLINRPGLPFLGAGETAQGPAAAAIGNAVAHAIG RRLRDLPLTRQRIKHAIEA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=458, Percent_Identity=23.3624454148472, Blast_Score=76, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 78749; Mature: 78618
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTITLDRRGVLLGGGALIVSFALRDTAAQPLPGGVKRPGSLTGAPYLDSWIRIDARGE CCCEEEECCCCEEEECHHHEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC ITVLTGKAELGQGLKTALRQVAAEELDVPVSGLKLVTADTGLTANEGYTSGSHSMQDSGT EEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH AIRNAAAQARALLITRASQRLNLSADQLRTDSGAVVAPDGTRISYGELVVGDTLHIEAEP HHHHHHHHHHHHEEEECHHHCCCCHHHHCCCCCCEECCCCCEEECCCEEECCEEEEECCC TSPLKGTARFTAMGKPLPRVDIPAKVTGGAAYVQDMRPSGMLHARVVRPPSYGAQLTTLD CCCCCCCEEEEECCCCCCCCCCCCEECCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEEC SAEVEAMPGVVKVVRNGNFLAVVAEKEFQAIRAMIALAARSQWREKASLPAQGDPRQLLT CCHHHHCCCHHHHEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH GLPAQDSIILNIANPAAATGTRTLEASYTRPYQAHGSIGPSCALAQFVDGAMTVWSHTQG CCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC VFPDRQAIAEMLQLPPDKVRVIHAEGSGCYGHNGADDAAADAALIARELPGRPIRVQWMR CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE EQEHAWEPFGPAMLTQAKASLDADGKIADWRYEVWSNTHSMRPGGAGSLLAAQHKADPVA CHHCCCCCCCHHHHHHHHHCCCCCCCEECEEEHHHCCCCCCCCCCCCCEEEECCCCCCCC EPAPKPLPLPEGGGDRNAIPIYTFPNATVTHHFIKQMPLRVSALRSLGAYHNVFSIESFI CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH DELALLAGADPVAFRLKHLTDARGRDVIDKAASAFGWSRGDKLPAGHGRGFAFARYKNLA HHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH AYCAIAADVEVNRDTGRARLVRAVAAVDAGEIINPDGLTNQIEGGIIQSMSWTLYESVTH EEEEEEECEEECCCCCHHHHHHHHHHCCCCCEECCCCCCHHHCCCCHHCCCHHHHHHCCC DDTRITSIDWQSYPILRFNSVPDSIEVHLINRPGLPFLGAGETAQGPAAAAIGNAVAHAI CCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHH GRRLRDLPLTRQRIKHAIEA HHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure TSTITLDRRGVLLGGGALIVSFALRDTAAQPLPGGVKRPGSLTGAPYLDSWIRIDARGE CCEEEECCCCEEEECHHHEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC ITVLTGKAELGQGLKTALRQVAAEELDVPVSGLKLVTADTGLTANEGYTSGSHSMQDSGT EEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH AIRNAAAQARALLITRASQRLNLSADQLRTDSGAVVAPDGTRISYGELVVGDTLHIEAEP HHHHHHHHHHHHEEEECHHHCCCCHHHHCCCCCCEECCCCCEEECCCEEECCEEEEECCC TSPLKGTARFTAMGKPLPRVDIPAKVTGGAAYVQDMRPSGMLHARVVRPPSYGAQLTTLD CCCCCCCEEEEECCCCCCCCCCCCEECCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEEC SAEVEAMPGVVKVVRNGNFLAVVAEKEFQAIRAMIALAARSQWREKASLPAQGDPRQLLT CCHHHHCCCHHHHEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH GLPAQDSIILNIANPAAATGTRTLEASYTRPYQAHGSIGPSCALAQFVDGAMTVWSHTQG CCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC VFPDRQAIAEMLQLPPDKVRVIHAEGSGCYGHNGADDAAADAALIARELPGRPIRVQWMR CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE EQEHAWEPFGPAMLTQAKASLDADGKIADWRYEVWSNTHSMRPGGAGSLLAAQHKADPVA CHHCCCCCCCHHHHHHHHHCCCCCCCEECEEEHHHCCCCCCCCCCCCCEEEECCCCCCCC EPAPKPLPLPEGGGDRNAIPIYTFPNATVTHHFIKQMPLRVSALRSLGAYHNVFSIESFI CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH DELALLAGADPVAFRLKHLTDARGRDVIDKAASAFGWSRGDKLPAGHGRGFAFARYKNLA HHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH AYCAIAADVEVNRDTGRARLVRAVAAVDAGEIINPDGLTNQIEGGIIQSMSWTLYESVTH EEEEEEECEEECCCCCHHHHHHHHHHCCCCCEECCCCCCHHHCCCCHHCCCHHHHHHCCC DDTRITSIDWQSYPILRFNSVPDSIEVHLINRPGLPFLGAGETAQGPAAAAIGNAVAHAI CCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHH GRRLRDLPLTRQRIKHAIEA HHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]