| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is yaiI [C]
Identifier: 146340132
GI number: 146340132
Start: 3347519
End: 3348013
Strand: Reverse
Name: yaiI [C]
Synonym: BRADO3147
Alternate gene names: 146340132
Gene position: 3348013-3347519 (Counterclockwise)
Preceding gene: 146340134
Following gene: 146340131
Centisome position: 44.9
GC content: 68.08
Gene sequence:
>495_bases ATGACGACCGAAACCGCCCCGATTACCCTCTATGTCGACGCCGACGCCTGCCCGGTGAAGGACGAGATCTACCGCGTCGC GATCCGGCACGGCCTGGCGGTGATCGTCGTCGCCGGCGGCTTCATCCGCGTGCCCGACGATCCCCTGATCACGCGCGTCG CGGCGGGCAGCGGCATGGATGCCGCCGATGACTGGATCGCCGAGCATACTGGTCCGGACGACATCGTCATTACCGCGGAC ATTCCGCTGGCGAGCCGCTGCGTCAAAGCCGGCAGCGCGGTCATCGCGCCGAACGGCAAGCCATTCACGGAAGAGTCCAT GGGCATGACGCTCGCGGTCCGCAATCTCATGACCGATCTGCGCTCCTCCGGCGAGGTCACCGGCGGCCCGCGCTCGTTCA CGCCACGCGACCGCTCCACATTCCTGTCCACCCTCGACACCACGATCCGCCGCGTGCAGCGCCAGCGCGCCGCGCGGATC CAGCAACAGAGCTAG
Upstream 100 bases:
>100_bases GGCGATGGTAGCGGCCGGAAAGTCCCTGGCAAGCGCAGCCTTTGGCTCGCAATTCCCGGCGCGATGGAGTACCAACCGGC CCATCCCTTATGAAGCCCCG
Downstream 100 bases:
>100_bases CATCACGATGGCGCCGCCTCTCATCCAACTCAAGGACATCCGCCTGACCTTCGGCGGCACGGCGCTGCTGCAAGGCGTGG AGCTGTCGGTGTCGCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTTETAPITLYVDADACPVKDEIYRVAIRHGLAVIVVAGGFIRVPDDPLITRVAAGSGMDAADDWIAEHTGPDDIVITAD IPLASRCVKAGSAVIAPNGKPFTEESMGMTLAVRNLMTDLRSSGEVTGGPRSFTPRDRSTFLSTLDTTIRRVQRQRAARI QQQS
Sequences:
>Translated_164_residues MTTETAPITLYVDADACPVKDEIYRVAIRHGLAVIVVAGGFIRVPDDPLITRVAAGSGMDAADDWIAEHTGPDDIVITAD IPLASRCVKAGSAVIAPNGKPFTEESMGMTLAVRNLMTDLRSSGEVTGGPRSFTPRDRSTFLSTLDTTIRRVQRQRAARI QQQS >Mature_163_residues TTETAPITLYVDADACPVKDEIYRVAIRHGLAVIVVAGGFIRVPDDPLITRVAAGSGMDAADDWIAEHTGPDDIVITADI PLASRCVKAGSAVIAPNGKPFTEESMGMTLAVRNLMTDLRSSGEVTGGPRSFTPRDRSTFLSTLDTTIRRVQRQRAARIQ QQS
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=151, Percent_Identity=39.7350993377483, Blast_Score=114, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3147_BRASO (A4YSR9)
Other databases:
- EMBL: CU234118 - RefSeq: YP_001205180.1 - STRING: A4YSR9 - GeneID: 5117050 - GenomeReviews: CU234118_GR - KEGG: bra:BRADO3147 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - ProtClustDB: PRK00124 - BioCyc: BSP376:BRADO3147-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 17610; Mature: 17479
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTETAPITLYVDADACPVKDEIYRVAIRHGLAVIVVAGGFIRVPDDPLITRVAAGSGMD CCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCEEECCCCHHHEEEECCCCCC AADDWIAEHTGPDDIVITADIPLASRCVKAGSAVIAPNGKPFTEESMGMTLAVRNLMTDL CHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCEEECCCCCCCCHHHCCHHHHHHHHHHHH RSSGEVTGGPRSFTPRDRSTFLSTLDTTIRRVQRQRAARIQQQS HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTETAPITLYVDADACPVKDEIYRVAIRHGLAVIVVAGGFIRVPDDPLITRVAAGSGMD CCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCEEECCCCHHHEEEECCCCCC AADDWIAEHTGPDDIVITADIPLASRCVKAGSAVIAPNGKPFTEESMGMTLAVRNLMTDL CHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCEEECCCCCCCCHHHCCHHHHHHHHHHHH RSSGEVTGGPRSFTPRDRSTFLSTLDTTIRRVQRQRAARIQQQS HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA