| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is steT [H]
Identifier: 146339972
GI number: 146339972
Start: 3180271
End: 3181644
Strand: Direct
Name: steT [H]
Synonym: BRADO2977
Alternate gene names: 146339972
Gene position: 3180271-3181644 (Clockwise)
Preceding gene: 146339970
Following gene: 146339973
Centisome position: 42.65
GC content: 65.5
Gene sequence:
>1374_bases ATGGCTGCAGCTGAGGCGCACGACAGCAAGCGGGCAAGCCGGTCGGGCAACACCGCACTCCCATCCGTGTCGCTGCCGGT CGCCATTGCCATCGTGATCGCCGACATGATCGGGGTCGGCGTCTTCACCAGCCTGGGCTTCCAGGTCAAGGATCTTCCTT CGGGTTTCGCCATCCTGCTGTTGTGGGCCGTCGGCGGTCTCGTTTCGATCTGCGGGGCGCTCTCCTATGCCGAGCTCGGC ACAATGTTTCCGCGCTCGAGCGGCGAATACAATTTTCTGACCCGGGCGTTTCATCCTGCGGTCGGCTTCATGGCCGGCTG GGTGTCGTCCACGGTCGGCTTCGCCGCTCCGGTGGCGCTGGCGGCGATGGCATTTGGCGAATATGGCCGCGCCGTGCTGC CGAGCGTGCCGCCGATGGTGCTGGCTGTCGGCGCCGTTTGGCTGGTGACGGTTGTGCAACTCGGCGGCATCCAGCAATCC AGCCGTTTCCAGCTGTTGTCGACAATGTTGAAGCTCGGCCTGATCCTCGCCTTCCTGATCGCGGGCGCGATCATTTCGGA TCCGCAACCGGTCAGGTTCGCGCCTGCCGCTGCCGATGTCGGCTATATCACCAGCGCGGCCTTCGCGACCGGCCTGGTGT TCGTGATGTACGCGTTCTCCGGCTGGAATGCGGCGACCTACATCATCGGCGAGTTGCATGCGCCCGATCACAGCCTGCCG CGCGCGCTGCTCGTGGGCACCCTGATCGTGATCGTGCTCTACGTGTCGCTGAACGCCGTGTTCCTCCGGGCGGCGCCGAC GAGCGAGCTTGCAGGGCAGCTGCAGGTGGCCAGCATCGCTGGCGCGCACATCTTCGGCGAGACGGGAGGCCGCTTCGTCG CGGCGATGATCTGCGTCGGATTGGTGCCGTCGATCGCTGCGATGATGTGGATCGGCCCGCGCGTGCTGATGACGATGGGC GAGGATATCCCGGCGCTCGCGCTGTTCGCCCGCCGGTCGCGCCAGGGCGCGCCGGTCTACGCGGTCCTGTTCCAGCTCGC AGTGGCAACCCTGATGCTGTTCACGGAGAGCTTCGAGGCGGTGCTGGACGTCGTCCAGTTCTCGCTGTTGTCCTGCTCGT TCCTGACGGTGCTGGGGTTGCTCTGGCTGCGCATCACCGCGCCCGATCTGTCGCGGCCGTATCGCGCATGGGGGTATCCC GTGACGCCCTTGATCTTCCTCAGCGTGACCGGTTTCATGATGTACTACCTCGTTACAGCACGGCCGTGGCAGGCCGGGTT CGGTGCTGCGGCGATGTTGTCGGGACTGCTGATCTATTGGTTCGCTCAAGCGCGGTCGCGCACCGCCGCAGCAGCGATGT CAGGTCCGGATTGA
Upstream 100 bases:
>100_bases ACATCGCCATACTTATCGCGCGTTAACTATGATTGAATGGCGTTGCCGGAGCATGGGCCTGAAGCTTGAGGGAAGGGGCG TCACTTGCCCGTCGAACGAC
Downstream 100 bases:
>100_bases AAGATGCTGCTGCTGTCGAGACTGTGCTTTGCTGCTGCGTGCTTCATCGTTGCGATGAGTGGCGACCTCCAGGCTCAGAC CATCACGCCCGATGATACCG
Product: putative amino acid transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MAAAEAHDSKRASRSGNTALPSVSLPVAIAIVIADMIGVGVFTSLGFQVKDLPSGFAILLLWAVGGLVSICGALSYAELG TMFPRSSGEYNFLTRAFHPAVGFMAGWVSSTVGFAAPVALAAMAFGEYGRAVLPSVPPMVLAVGAVWLVTVVQLGGIQQS SRFQLLSTMLKLGLILAFLIAGAIISDPQPVRFAPAAADVGYITSAAFATGLVFVMYAFSGWNAATYIIGELHAPDHSLP RALLVGTLIVIVLYVSLNAVFLRAAPTSELAGQLQVASIAGAHIFGETGGRFVAAMICVGLVPSIAAMMWIGPRVLMTMG EDIPALALFARRSRQGAPVYAVLFQLAVATLMLFTESFEAVLDVVQFSLLSCSFLTVLGLLWLRITAPDLSRPYRAWGYP VTPLIFLSVTGFMMYYLVTARPWQAGFGAAAMLSGLLIYWFAQARSRTAAAAMSGPD
Sequences:
>Translated_457_residues MAAAEAHDSKRASRSGNTALPSVSLPVAIAIVIADMIGVGVFTSLGFQVKDLPSGFAILLLWAVGGLVSICGALSYAELG TMFPRSSGEYNFLTRAFHPAVGFMAGWVSSTVGFAAPVALAAMAFGEYGRAVLPSVPPMVLAVGAVWLVTVVQLGGIQQS SRFQLLSTMLKLGLILAFLIAGAIISDPQPVRFAPAAADVGYITSAAFATGLVFVMYAFSGWNAATYIIGELHAPDHSLP RALLVGTLIVIVLYVSLNAVFLRAAPTSELAGQLQVASIAGAHIFGETGGRFVAAMICVGLVPSIAAMMWIGPRVLMTMG EDIPALALFARRSRQGAPVYAVLFQLAVATLMLFTESFEAVLDVVQFSLLSCSFLTVLGLLWLRITAPDLSRPYRAWGYP VTPLIFLSVTGFMMYYLVTARPWQAGFGAAAMLSGLLIYWFAQARSRTAAAAMSGPD >Mature_456_residues AAAEAHDSKRASRSGNTALPSVSLPVAIAIVIADMIGVGVFTSLGFQVKDLPSGFAILLLWAVGGLVSICGALSYAELGT MFPRSSGEYNFLTRAFHPAVGFMAGWVSSTVGFAAPVALAAMAFGEYGRAVLPSVPPMVLAVGAVWLVTVVQLGGIQQSS RFQLLSTMLKLGLILAFLIAGAIISDPQPVRFAPAAADVGYITSAAFATGLVFVMYAFSGWNAATYIIGELHAPDHSLPR ALLVGTLIVIVLYVSLNAVFLRAAPTSELAGQLQVASIAGAHIFGETGGRFVAAMICVGLVPSIAAMMWIGPRVLMTMGE DIPALALFARRSRQGAPVYAVLFQLAVATLMLFTESFEAVLDVVQFSLLSCSFLTVLGLLWLRITAPDLSRPYRAWGYPV TPLIFLSVTGFMMYYLVTARPWQAGFGAAAMLSGLLIYWFAQARSRTAAAAMSGPD
Specific function: Exhibits an obligate exchange activity for serine, threonine and aromatic amino acids [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family [H]
Homologues:
Organism=Homo sapiens, GI187423910, Length=467, Percent_Identity=25.9100642398287, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI7657591, Length=467, Percent_Identity=25.9100642398287, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI33286428, Length=462, Percent_Identity=27.4891774891775, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI7657683, Length=407, Percent_Identity=26.044226044226, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI115648063, Length=459, Percent_Identity=26.1437908496732, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI115648022, Length=459, Percent_Identity=26.1437908496732, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI71979932, Length=458, Percent_Identity=24.0174672489083, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI186910308, Length=439, Percent_Identity=25.9681093394077, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI186910306, Length=439, Percent_Identity=25.9681093394077, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI186910304, Length=439, Percent_Identity=25.9681093394077, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI9790235, Length=416, Percent_Identity=25.9615384615385, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI71999149, Length=387, Percent_Identity=24.031007751938, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI33286430, Length=248, Percent_Identity=27.0161290322581, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87082250, Length=365, Percent_Identity=25.4794520547945, Blast_Score=82, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17540018, Length=461, Percent_Identity=25.8134490238612, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI32566699, Length=399, Percent_Identity=25.31328320802, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71995388, Length=448, Percent_Identity=27.0089285714286, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI71995382, Length=448, Percent_Identity=27.0089285714286, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI71982608, Length=379, Percent_Identity=24.0105540897098, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71982612, Length=379, Percent_Identity=24.0105540897098, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71993915, Length=381, Percent_Identity=24.4094488188976, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17568033, Length=460, Percent_Identity=23.9130434782609, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71990446, Length=440, Percent_Identity=22.7272727272727, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71982623, Length=256, Percent_Identity=26.5625, Blast_Score=85, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6321492, Length=404, Percent_Identity=20.7920792079208, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI45550968, Length=450, Percent_Identity=26, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI19921172, Length=450, Percent_Identity=26, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI221331183, Length=462, Percent_Identity=25.7575757575758, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI17647653, Length=462, Percent_Identity=25.7575757575758, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24664379, Length=462, Percent_Identity=25.7575757575758, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24651635, Length=439, Percent_Identity=25.9681093394077, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI24651633, Length=439, Percent_Identity=25.9681093394077, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI21357367, Length=458, Percent_Identity=22.9257641921397, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24641993, Length=405, Percent_Identity=25.679012345679, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24641995, Length=405, Percent_Identity=25.679012345679, Blast_Score=105, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 48163; Mature: 48032
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAEAHDSKRASRSGNTALPSVSLPVAIAIVIADMIGVGVFTSLGFQVKDLPSGFAILL CCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHH LWAVGGLVSICGALSYAELGTMFPRSSGEYNFLTRAFHPAVGFMAGWVSSTVGFAAPVAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAMAFGEYGRAVLPSVPPMVLAVGAVWLVTVVQLGGIQQSSRFQLLSTMLKLGLILAFLI HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AGAIISDPQPVRFAPAAADVGYITSAAFATGLVFVMYAFSGWNAATYIIGELHAPDHSLP HHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCH RALLVGTLIVIVLYVSLNAVFLRAAPTSELAGQLQVASIAGAHIFGETGGRFVAAMICVG HHHHHHHHHHHHHHHHHHHHEEECCCCHHHHCCCHHHHHHCHHHCCCCCHHHHHHHHHHH LVPSIAAMMWIGPRVLMTMGEDIPALALFARRSRQGAPVYAVLFQLAVATLMLFTESFEA HHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VLDVVQFSLLSCSFLTVLGLLWLRITAPDLSRPYRAWGYPVTPLIFLSVTGFMMYYLVTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHC RPWQAGFGAAAMLSGLLIYWFAQARSRTAAAAMSGPD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AAAEAHDSKRASRSGNTALPSVSLPVAIAIVIADMIGVGVFTSLGFQVKDLPSGFAILL CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHH LWAVGGLVSICGALSYAELGTMFPRSSGEYNFLTRAFHPAVGFMAGWVSSTVGFAAPVAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAMAFGEYGRAVLPSVPPMVLAVGAVWLVTVVQLGGIQQSSRFQLLSTMLKLGLILAFLI HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AGAIISDPQPVRFAPAAADVGYITSAAFATGLVFVMYAFSGWNAATYIIGELHAPDHSLP HHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCH RALLVGTLIVIVLYVSLNAVFLRAAPTSELAGQLQVASIAGAHIFGETGGRFVAAMICVG HHHHHHHHHHHHHHHHHHHHEEECCCCHHHHCCCHHHHHHCHHHCCCCCHHHHHHHHHHH LVPSIAAMMWIGPRVLMTMGEDIPALALFARRSRQGAPVYAVLFQLAVATLMLFTESFEA HHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VLDVVQFSLLSCSFLTVLGLLWLRITAPDLSRPYRAWGYPVTPLIFLSVTGFMMYYLVTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHC RPWQAGFGAAAMLSGLLIYWFAQARSRTAAAAMSGPD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]