| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339968
Identifier: 146339968
GI number: 146339968
Start: 3175614
End: 3176876
Strand: Direct
Name: 146339968
Synonym: BRADO2973
Alternate gene names: NA
Gene position: 3175614-3176876 (Clockwise)
Preceding gene: 146339966
Following gene: 146339969
Centisome position: 42.59
GC content: 67.93
Gene sequence:
>1263_bases ATGCTGCCGAGGCAAGCCGCGCCGGCGAAGCCGGCGGCAGATGCCGCGCCGGCGAAGAAGCCTGCGGCCTCGCCCCGGAT TGCCGACAATTCGGCGCCGATCTCATTCGCGCTCGTCAAAGGCGGGCCTGATTCCTGCGGTCCGGGCTGCGACACCTGGA TCGCGGCGGAAGGCAAGATCGATGGCAGCGCGCTGGCGCGGCTGCGCAAGTTCATGAAGCAGATCGGCGAGCGCAAGCTG CCGATCTACTTCAACTCGCCCGGCGGCAATGTCGAGCAGGCGCTCGCGATGGGCAACTGGCTCCGCGAGAAGAAGGCCTC CGTTCGCGTGGGAAGGACCACCGCGCGCGAATGCGGCTTCGAGCCGCAGGAGGGCGAGGTCTGCACCAAGCTGAAGCTGT CCGGCCGCGAGCTGCATGGCGAGGTCTGGACCCGCGGGTCGATGTGCAACTCGGCCTGCCCCTATATCATCCTCGGCGCG CCCAGCCGCGAGCTCGCTCCGGACGTGACGCTCGCGGTGCATTCGCCGCGCGTGATCCTGAACTTCACCGGCGGCGTGCC GACGCACGAGATGCGCGTGCAGGCGCTGCAGCGGGCGATGGAGCGGGCCGACAAGATGGTGCTCGACTACATCAACAAGC TCGGCGCCGATCCAGGCCTCTTGACGGCGGCGCGCTCGGTGCCGTTCGAGAGCATGCGCATCCTGACGCGGGAGGAGATC GTGCGCTTCGCGCTCGACAAGCGCGAGCGGGTCGAGAGTCCCTGGATGTTCGAGGCGGCCGCCCGCGGCATCGCCTACAA GACCATCCTGTCGCGCAACGGCGGCGAATCCACGTTCCGCACCACGCGCTTCCAGCTCGTCTGCTTCCACCAGGACCGCT TCGAGCTCGATGTCGAGCGCAACGCGGGACCGGCCGGTGGTGTCGGGATTCTGTCGATCGCCAGCGGCGACCTCAGGCTC AACTTCCTGTCGCCGCCGCGCCGGTCGGGCGAGCGCGAGACGTGGGGGGTGTTTCTCAACGGCAGTCAGATGAAGACGCT GGCATCATCCGCCGCTGTCGAGTTGAGCGATGCGTCGTTGAGCGGGGCGCGTCTGGGCGGATCGGGTTTTCCGGTCGGGG GCGATGGACTGCAGAACGTCGTGAAGAAGCTGACGGACAGCTGTCCGCCGTCGAAGGCCGTGACTTATCCTTCTCCTTCG GGCACGCCCGTGCCGTGGATGCAAGCGCCGTCACCACAAGCGTCGGCCCAGCCCGTACGCTGA
Upstream 100 bases:
>100_bases GGCCGTGCCGCCGACAACCCAGCCCTCGTCAACCAAGCCGCTGGCGAGCAAGCCATTGATCGGCAAGCCGGCGATCCCGG TCAGGCCGGCCGCACCGGCG
Downstream 100 bases:
>100_bases CGGGACGAAAGAATATCATGTGCGGCATGAGGAATTTTCATGCAGGTGCATGAAAATCCCTGCTATTGAACGGTCATGAC ATCCGCTTCGACCATGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKIDGSALARLRKFMKQIGERKL PIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGFEPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGA PSRELAPDVTLAVHSPRVILNFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVERNAGPAGGVGILSIASGDLRL NFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASLSGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPS GTPVPWMQAPSPQASAQPVR
Sequences:
>Translated_420_residues MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKIDGSALARLRKFMKQIGERKL PIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGFEPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGA PSRELAPDVTLAVHSPRVILNFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVERNAGPAGGVGILSIASGDLRL NFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASLSGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPS GTPVPWMQAPSPQASAQPVR >Mature_420_residues MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKIDGSALARLRKFMKQIGERKL PIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGFEPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGA PSRELAPDVTLAVHSPRVILNFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVERNAGPAGGVGILSIASGDLRL NFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASLSGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPS GTPVPWMQAPSPQASAQPVR
Specific function: Unknown
COG id: COG3904
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45083; Mature: 45083
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCC DGSALARLRKFMKQIGERKLPIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGF CHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHCCC EPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGAPSRELAPDVTLAVHSPRVIL CCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCEEEE NFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHH VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVER HHHHHHHHHHCCCCCHHHHHHCCHHEEHHHHCCCCCCCEEEEEEEEEEEECCCEEEEEEC NAGPAGGVGILSIASGDLRLNFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASL CCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCC SGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPSGTPVPWMQAPSPQASAQPVR CCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCC DGSALARLRKFMKQIGERKLPIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGF CHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHCCC EPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGAPSRELAPDVTLAVHSPRVIL CCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCEEEE NFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHH VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVER HHHHHHHHHHCCCCCHHHHHHCCHHEEHHHHCCCCCCCEEEEEEEEEEEECCCEEEEEEC NAGPAGGVGILSIASGDLRLNFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASL CCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCC SGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPSGTPVPWMQAPSPQASAQPVR CCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA