| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339900
Identifier: 146339900
GI number: 146339900
Start: 3103515
End: 3104273
Strand: Reverse
Name: 146339900
Synonym: BRADO2902
Alternate gene names: NA
Gene position: 3104273-3103515 (Counterclockwise)
Preceding gene: 146339901
Following gene: 146339899
Centisome position: 41.63
GC content: 63.11
Gene sequence:
>759_bases ATGACCTATTGCTGCGGAATTCTGGTGCGTGACGGGCTCGTCATGATCGCGGACACAAGAACCAATGCCGGTCTCGACAA CGTCTCGACCTTCCGCAAGCTGCACATCTTCTCCAATCCCGGCGAGCGTATCGTGGCGGTCGCCAGTGCCGGCAATCTCG CCATCAGCCAGTCCGTGCTGTCGACCCTGACCGAGGGCATGGAAGATCCCGAGACCGGCGAGGTCGAGACCTTGATGAAC GCACCGACCATGTTCCAGGCAGCGCAGCGCATCGGCAAGGCGATTCGCATGGTGCATGCGACCGAAGGTCCGGCTCTGAA GGCCGAGGACATCTCGTTCGACGTCTCCTTCCTGTTCGGCGGCCAGATCCGGGGCTCGCGGATGCGGCTGTTCATGGTCT ACACCGCCGGCAACTTCATCGAGTGCACGACGGACACGCCGTATTTGCAGATCGGCGAGCACAAATACGGCAAGCCGGTG CTCGACCGCGCCATGCACTACGACGTCGAGCTCTATGAGGCGCTCAAGACGGGCCTGATCTCGATGGATTCGACGATGCG CTCGAACCTCGGCGTCGGCCTGCCGATCGACGTGCTGGTGGTGCGCTCCGATGCCTGCGAGGCGGATCTCAACCACCGCA TCGAGGCCGGCGAGCCCTATTTCCACGACCTCCGCTCGCGCTGGTCGGCGGCCCTGCGCGCGGCGCATAACAACATCCCG CGGCCGCCCTATAAGACTCAGAGCGAAGTGAAGCACTGA
Upstream 100 bases:
>100_bases CCGGGCGCCGGCTTTCGCTCATCCGGGCTACGGCATTGCAGGGTTGGACGGACCGCCGATTTTCGCTAACTATTCGCGCT CTGGCTCGAGGGGACTGACG
Downstream 100 bases:
>100_bases CGCTGTCGAACGCTCAAAACTGCAAAACGTGAAAAGGTGAGGACACATGGCTGAGGCAAAGAAGATAGCGCTGGTGACGG GCGCAGGCACCGGTGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; 20S Proteasome A And Subunit Bs; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; A And B-Type Proteasome Family Protein; Proteasome-Type Protease-Like Protein; Proteasome Protease; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; 20S Proteasome A And B Subunit
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTYCCGILVRDGLVMIADTRTNAGLDNVSTFRKLHIFSNPGERIVAVASAGNLAISQSVLSTLTEGMEDPETGEVETLMN APTMFQAAQRIGKAIRMVHATEGPALKAEDISFDVSFLFGGQIRGSRMRLFMVYTAGNFIECTTDTPYLQIGEHKYGKPV LDRAMHYDVELYEALKTGLISMDSTMRSNLGVGLPIDVLVVRSDACEADLNHRIEAGEPYFHDLRSRWSAALRAAHNNIP RPPYKTQSEVKH
Sequences:
>Translated_252_residues MTYCCGILVRDGLVMIADTRTNAGLDNVSTFRKLHIFSNPGERIVAVASAGNLAISQSVLSTLTEGMEDPETGEVETLMN APTMFQAAQRIGKAIRMVHATEGPALKAEDISFDVSFLFGGQIRGSRMRLFMVYTAGNFIECTTDTPYLQIGEHKYGKPV LDRAMHYDVELYEALKTGLISMDSTMRSNLGVGLPIDVLVVRSDACEADLNHRIEAGEPYFHDLRSRWSAALRAAHNNIP RPPYKTQSEVKH >Mature_251_residues TYCCGILVRDGLVMIADTRTNAGLDNVSTFRKLHIFSNPGERIVAVASAGNLAISQSVLSTLTEGMEDPETGEVETLMNA PTMFQAAQRIGKAIRMVHATEGPALKAEDISFDVSFLFGGQIRGSRMRLFMVYTAGNFIECTTDTPYLQIGEHKYGKPVL DRAMHYDVELYEALKTGLISMDSTMRSNLGVGLPIDVLVVRSDACEADLNHRIEAGEPYFHDLRSRWSAALRAAHNNIPR PPYKTQSEVKH
Specific function: Unknown
COG id: COG3484
COG function: function code O; Predicted proteasome-type protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27826; Mature: 27695
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYCCGILVRDGLVMIADTRTNAGLDNVSTFRKLHIFSNPGERIVAVASAGNLAISQSVL CCEEEEEEECCCEEEEEECCCCCCCCHHHHHHEEEEECCCCCEEEEEECCCCHHHHHHHH STLTEGMEDPETGEVETLMNAPTMFQAAQRIGKAIRMVHATEGPALKAEDISFDVSFLFG HHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEEEC GQIRGSRMRLFMVYTAGNFIECTTDTPYLQIGEHKYGKPVLDRAMHYDVELYEALKTGLI CEECCCEEEEEEEEECCCEEEECCCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHHCCC SMDSTMRSNLGVGLPIDVLVVRSDACEADLNHRIEAGEPYFHDLRSRWSAALRAAHNNIP CCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC RPPYKTQSEVKH CCCCCCHHHCCC >Mature Secondary Structure TYCCGILVRDGLVMIADTRTNAGLDNVSTFRKLHIFSNPGERIVAVASAGNLAISQSVL CEEEEEEECCCEEEEEECCCCCCCCHHHHHHEEEEECCCCCEEEEEECCCCHHHHHHHH STLTEGMEDPETGEVETLMNAPTMFQAAQRIGKAIRMVHATEGPALKAEDISFDVSFLFG HHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEEEC GQIRGSRMRLFMVYTAGNFIECTTDTPYLQIGEHKYGKPVLDRAMHYDVELYEALKTGLI CEECCCEEEEEEEEECCCEEEECCCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHHCCC SMDSTMRSNLGVGLPIDVLVVRSDACEADLNHRIEAGEPYFHDLRSRWSAALRAAHNNIP CCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC RPPYKTQSEVKH CCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA