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The map label for this gene is yddQ [H]

Identifier: 146339888

GI number: 146339888

Start: 3091546

End: 3092142

Strand: Reverse

Name: yddQ [H]

Synonym: BRADO2890

Alternate gene names: 146339888

Gene position: 3092142-3091546 (Counterclockwise)

Preceding gene: 146339890

Following gene: 146339877

Centisome position: 41.47

GC content: 69.18

Gene sequence:

>597_bases
ATGACCACCCCCAAAACTCTGCTCGAATTATCAGGCGCCGATCTGACGCTGCCCAAGCTCGCCGAATCCTGCCTCGTGCT
GATCGACATCCAGAACGAATATCGCGAGGGCCCGCTGGCGCTGCCGCAGGTCGAGGCTGCGATCGCGCAGGCCGCCCGGC
TGTTGGCGCGAGCGCGCGCCGCCGGCAGCGTCATCATCCACGTCGCCCATCGCGGCAATGCGGGCAGCCTGTTCGACCGC
AGCGCGCCGCGGGGTGCGATCGTTGAGGCCGTCGAGCCGCAGGGTGGCGAGGCGGTCGTCGAGAAGACGCTGCCGAACGC
CTTCGCCGGCACGGAGCTCCAGACCCTGCTGACCGCCGCCGGCCGCAAGAACCTCGTGCTCGCCGGCTTCATGACTCATA
TGTGCGTGTCGTCGACGGCGCGGGCGGCGCTCGATCTCGGCTGGCGCTTGACCATCGATGCCGAGAGCTGTGCGACACGC
GACCTCCCGGACGGCCATGGCGGCACACTGCCGGCGGCGTCGGTGCATCAGGTCGCGCTCGCCGAATTGTCCGATCGCTT
CGCGATCATCGTCGGCGACGGCGCCGCGCTGATCTAG

Upstream 100 bases:

>100_bases
GACGTGCCTGCAATTCCGCAGCCAGCGGCTGCAAGCTCCTGCGTTGCCGCAGGCGCCGCGCCAGCTAAGGTGATGCCACC
TGATCACGGAGCATCCCATC

Downstream 100 bases:

>100_bases
CCTAGCGCACCGTCGTCCCGATCCGATCGGTGCGCAACCTGCTGGGCTGGCCTTGTTTGGCCTCCGCAGCGGAGAAAAAG
ATCATCGCGGCACGGCCGAT

Product: putative isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTTPKTLLELSGADLTLPKLAESCLVLIDIQNEYREGPLALPQVEAAIAQAARLLARARAAGSVIIHVAHRGNAGSLFDR
SAPRGAIVEAVEPQGGEAVVEKTLPNAFAGTELQTLLTAAGRKNLVLAGFMTHMCVSSTARAALDLGWRLTIDAESCATR
DLPDGHGGTLPAASVHQVALAELSDRFAIIVGDGAALI

Sequences:

>Translated_198_residues
MTTPKTLLELSGADLTLPKLAESCLVLIDIQNEYREGPLALPQVEAAIAQAARLLARARAAGSVIIHVAHRGNAGSLFDR
SAPRGAIVEAVEPQGGEAVVEKTLPNAFAGTELQTLLTAAGRKNLVLAGFMTHMCVSSTARAALDLGWRLTIDAESCATR
DLPDGHGGTLPAASVHQVALAELSDRFAIIVGDGAALI
>Mature_197_residues
TTPKTLLELSGADLTLPKLAESCLVLIDIQNEYREGPLALPQVEAAIAQAARLLARARAAGSVIIHVAHRGNAGSLFDRS
APRGAIVEAVEPQGGEAVVEKTLPNAFAGTELQTLLTAAGRKNLVLAGFMTHMCVSSTARAALDLGWRLTIDAESCATRD
LPDGHGGTLPAASVHQVALAELSDRFAIIVGDGAALI

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20535; Mature: 20404

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPKTLLELSGADLTLPKLAESCLVLIDIQNEYREGPLALPQVEAAIAQAARLLARARA
CCCHHHHHHCCCCCCCHHHHHCCEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHC
AGSVIIHVAHRGNAGSLFDRSAPRGAIVEAVEPQGGEAVVEKTLPNAFAGTELQTLLTAA
CCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHC
GRKNLVLAGFMTHMCVSSTARAALDLGWRLTIDAESCATRDLPDGHGGTLPAASVHQVAL
CCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHH
AELSDRFAIIVGDGAALI
HHHCCCEEEEECCCCCCC
>Mature Secondary Structure 
TTPKTLLELSGADLTLPKLAESCLVLIDIQNEYREGPLALPQVEAAIAQAARLLARARA
CCHHHHHHCCCCCCCHHHHHCCEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHC
AGSVIIHVAHRGNAGSLFDRSAPRGAIVEAVEPQGGEAVVEKTLPNAFAGTELQTLLTAA
CCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHC
GRKNLVLAGFMTHMCVSSTARAALDLGWRLTIDAESCATRDLPDGHGGTLPAASVHQVAL
CCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHH
AELSDRFAIIVGDGAALI
HHHCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]