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The map label for this gene is yagR [H]

Identifier: 146339882

GI number: 146339882

Start: 3084804

End: 3087023

Strand: Direct

Name: yagR [H]

Synonym: BRADO2884

Alternate gene names: 146339882

Gene position: 3084804-3087023 (Clockwise)

Preceding gene: 146339881

Following gene: 146339883

Centisome position: 41.37

GC content: 66.53

Gene sequence:

>2220_bases
ATGAAGTTCGAGACGCCCGCGACGACCAACCCGATCGATCAGCAGAAGGTGGTCGGCAAGCCGACCGACCGCATCGACGG
CCGCTTCAAGGTGACGGGCACGGCGCCCTATGCCTATGAACGCCACGACGTGGCGCCCAACCAGGCCTATGGCTACGTGC
TCGGGGCCGGCATCGCGAAGGGCCGCATCAGGTCGATGGATCTGAGCAGAGCCAAGGCCGCGCCCGGTGTGATCGCCATC
GTCAGCACGCTCGACATGGACAGGCTCGACCTCGGCCGGATGAACACGGCCTCGCTGTTCGGCGGCCCGGATATTCAGCA
CTATCACCAGGCCATCGCGCTGGTCGTCGCCGAAACTTTCGAGCAGGCGCGGGCCGCGGCCTCGCTCATCGACGTCGACT
ATCAGCGACAGGAAGGCCGGTTCGATCTCGGTGCGGCCGCCGGAAGCGCGCCGCCCGTGGGCGGCGACAGTGGCGAAGGC
AGCGGCGCGAAGCCGGTCAACGGCATCGGCGATTTCAACGGCGCGTTCGCCGCTGCCCCCGTCAAGCTCGACGCGATCTA
CACCACGCCCGACGAGAGCCACGCGATGATGGAGCCGCACGCCAGCATCGCGGCGTGGAACGGCGACAGGCTGACGCTCT
GGACTTCGAACCAGATGATCAATTGGGGGAAGGGCAGCATCGCGAAAATCCTCGGCATCCGGCCTGAGAACGTGCGTCTC
GACTCCCCCTATATCGGTGGCGGCTTCGGCGGCAAGCTGTTCATCCGCGCCGATGCGGTGCTGGCCGCACTCGGCGCGCG
GGCAGCGCAGCGTCCTGTCAAGGTGACGCTGCCGCGGCCGCTCGTGATCAACAACACGACGCACCGCCCCGCCACCATTC
AGCGCGTTCGCATCGGCGCGACGCCCGACGGGAAGATCACGGCGATTGCGCATGAGAGCACGTCGGGCAATCTGCCGGGT
GGCCGGCCCGAGACCGCGGTCGACCAGACCAAGCTGCTCTATGCCGGCGCCAACCGGCTGACGGCGATGAAACTGGCCGA
GCTCGATCTGCCCGAGGGTAACGCGATGCGCGCGCCAGGCGAGGCGCCTGGCATGATGGCGCTGGAGATCGCGATGGACG
AGATGGCCGAGAAGCTCGGCCTCGATCCGGTCGAATTCCGCGTTCGCAACGATACCCAGGTCGATCCGCAGAATCCGGAA
CGCCCGTTCTCACACCGCAATCTCATCGGCTGCCTGAAGCTCGGCGCGGAACGCTTCGGGTGGGACCAGCGCATGGCCCG
GCCGGCCCAGAGTCGCGACGGGCGCTGGCTTGTGGGCCTGGGAATGGCCGCCGGCTTCCGCAACAATCTGCTGCAGACAT
CCGCCGCGCGCGTGCGGCTCGGCGGCGACGGCATCGTGACGGTCGAGACCGATATGACGGATATCGGCACCGGCAGCTAC
ACGATCATCGCGCAGACCGCCGCGGAGATGATGGGTGTGCCGATCGAGCGTGTCGTGGTGAAGCTTGGCGATTCCGATTT
CCCCGCATCGGCGGGCTCGGGCGGCCAATGGGGCGGCAACAACTCCACAGCGGGCGTGTATGCGGCCTGCATCAAGCTGC
GCGACGCAGTCGCCGCAAGGCTCGGCTTCAATTCGTCTGAGCTCGTGTTCGCCGATGGTGAGGTCCGGGCCGGCAACCGC
AGCGCGCCGCTGGCGCGGGCGGCCGCCGATGGTGAGCTCGTGGCGGAAGATGCGATCGAATACGGCGATCTCGCCAAGAC
GCATCAGCAATCGACCTTCGCGGCCCATTTCGTCGAAGTCGCGGTCGATGCGGCGACGGCCGAGATTCGGGTGCGGCGGA
TGCTGGCGGTGTGCGCAGCCGGCCGGATTCTGAATCCGAAATCGGCGCGCAGCCAGGTGATCGGCGCCATGACCATGGGC
GTCGGCGCGGCATTGATGGAGGAGCTTGCGGTCGACAAGCGCTACGGCTTGTTCGTCAATCATGACCTCGCCAGCTACGA
GGTGCCCGTACATGCGGACATCCCGCATCAGGAGGTCATCTTTTTGGATGAGAGCGATCCGATGTCGTCGCCGATGAAAG
CAAAAGGCGTCGCCGAACTCGGCATCTGCGGCGTCGGTGCCGCCGTCGCAAATGCGGTCTACAACGCGACCGGCGTGCGT
GTCCGCAACTATCCGATCACGCTCGACAAGCTGATCGGAAGCCTGCCTGAAACGGCGTGA

Upstream 100 bases:

>100_bases
GGCTGCTGGCCGACGCCAAGCCGACGCACGACAACAGCTTCAAGATCCGCCTTGCCGAGCGCACCCTCGGCGCGGTTCTG
GCCCAAGCACGAGGCTGACC

Downstream 100 bases:

>100_bases
CCGACCGCGGGGCGAGCGATCGGTCGTGCGGTGCTACATGCCGATTGTAGACATCATTCGGCGCTTGTGCCCGCGCATAT
GCCAGCTCCTCGCATGGGTG

Product: putative xanthine dehydrogenase, molybdenum binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 739

Protein sequence:

>739_residues
MKFETPATTNPIDQQKVVGKPTDRIDGRFKVTGTAPYAYERHDVAPNQAYGYVLGAGIAKGRIRSMDLSRAKAAPGVIAI
VSTLDMDRLDLGRMNTASLFGGPDIQHYHQAIALVVAETFEQARAAASLIDVDYQRQEGRFDLGAAAGSAPPVGGDSGEG
SGAKPVNGIGDFNGAFAAAPVKLDAIYTTPDESHAMMEPHASIAAWNGDRLTLWTSNQMINWGKGSIAKILGIRPENVRL
DSPYIGGGFGGKLFIRADAVLAALGARAAQRPVKVTLPRPLVINNTTHRPATIQRVRIGATPDGKITAIAHESTSGNLPG
GRPETAVDQTKLLYAGANRLTAMKLAELDLPEGNAMRAPGEAPGMMALEIAMDEMAEKLGLDPVEFRVRNDTQVDPQNPE
RPFSHRNLIGCLKLGAERFGWDQRMARPAQSRDGRWLVGLGMAAGFRNNLLQTSAARVRLGGDGIVTVETDMTDIGTGSY
TIIAQTAAEMMGVPIERVVVKLGDSDFPASAGSGGQWGGNNSTAGVYAACIKLRDAVAARLGFNSSELVFADGEVRAGNR
SAPLARAAADGELVAEDAIEYGDLAKTHQQSTFAAHFVEVAVDAATAEIRVRRMLAVCAAGRILNPKSARSQVIGAMTMG
VGAALMEELAVDKRYGLFVNHDLASYEVPVHADIPHQEVIFLDESDPMSSPMKAKGVAELGICGVGAAVANAVYNATGVR
VRNYPITLDKLIGSLPETA

Sequences:

>Translated_739_residues
MKFETPATTNPIDQQKVVGKPTDRIDGRFKVTGTAPYAYERHDVAPNQAYGYVLGAGIAKGRIRSMDLSRAKAAPGVIAI
VSTLDMDRLDLGRMNTASLFGGPDIQHYHQAIALVVAETFEQARAAASLIDVDYQRQEGRFDLGAAAGSAPPVGGDSGEG
SGAKPVNGIGDFNGAFAAAPVKLDAIYTTPDESHAMMEPHASIAAWNGDRLTLWTSNQMINWGKGSIAKILGIRPENVRL
DSPYIGGGFGGKLFIRADAVLAALGARAAQRPVKVTLPRPLVINNTTHRPATIQRVRIGATPDGKITAIAHESTSGNLPG
GRPETAVDQTKLLYAGANRLTAMKLAELDLPEGNAMRAPGEAPGMMALEIAMDEMAEKLGLDPVEFRVRNDTQVDPQNPE
RPFSHRNLIGCLKLGAERFGWDQRMARPAQSRDGRWLVGLGMAAGFRNNLLQTSAARVRLGGDGIVTVETDMTDIGTGSY
TIIAQTAAEMMGVPIERVVVKLGDSDFPASAGSGGQWGGNNSTAGVYAACIKLRDAVAARLGFNSSELVFADGEVRAGNR
SAPLARAAADGELVAEDAIEYGDLAKTHQQSTFAAHFVEVAVDAATAEIRVRRMLAVCAAGRILNPKSARSQVIGAMTMG
VGAALMEELAVDKRYGLFVNHDLASYEVPVHADIPHQEVIFLDESDPMSSPMKAKGVAELGICGVGAAVANAVYNATGVR
VRNYPITLDKLIGSLPETA
>Mature_739_residues
MKFETPATTNPIDQQKVVGKPTDRIDGRFKVTGTAPYAYERHDVAPNQAYGYVLGAGIAKGRIRSMDLSRAKAAPGVIAI
VSTLDMDRLDLGRMNTASLFGGPDIQHYHQAIALVVAETFEQARAAASLIDVDYQRQEGRFDLGAAAGSAPPVGGDSGEG
SGAKPVNGIGDFNGAFAAAPVKLDAIYTTPDESHAMMEPHASIAAWNGDRLTLWTSNQMINWGKGSIAKILGIRPENVRL
DSPYIGGGFGGKLFIRADAVLAALGARAAQRPVKVTLPRPLVINNTTHRPATIQRVRIGATPDGKITAIAHESTSGNLPG
GRPETAVDQTKLLYAGANRLTAMKLAELDLPEGNAMRAPGEAPGMMALEIAMDEMAEKLGLDPVEFRVRNDTQVDPQNPE
RPFSHRNLIGCLKLGAERFGWDQRMARPAQSRDGRWLVGLGMAAGFRNNLLQTSAARVRLGGDGIVTVETDMTDIGTGSY
TIIAQTAAEMMGVPIERVVVKLGDSDFPASAGSGGQWGGNNSTAGVYAACIKLRDAVAARLGFNSSELVFADGEVRAGNR
SAPLARAAADGELVAEDAIEYGDLAKTHQQSTFAAHFVEVAVDAATAEIRVRRMLAVCAAGRILNPKSARSQVIGAMTMG
VGAALMEELAVDKRYGLFVNHDLASYEVPVHADIPHQEVIFLDESDPMSSPMKAKGVAELGICGVGAAVANAVYNATGVR
VRNYPITLDKLIGSLPETA

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=683, Percent_Identity=23.5724743777452, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI71773480, Length=744, Percent_Identity=23.1182795698925, Blast_Score=112, Evalue=1e-24,
Organism=Escherichia coli, GI1786478, Length=739, Percent_Identity=67.7943166441137, Blast_Score=1003, Evalue=0.0,
Organism=Escherichia coli, GI1789230, Length=754, Percent_Identity=28.7798408488064, Blast_Score=235, Evalue=6e-63,
Organism=Escherichia coli, GI1789246, Length=805, Percent_Identity=25.8385093167702, Blast_Score=191, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17540638, Length=725, Percent_Identity=25.6551724137931, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24647199, Length=705, Percent_Identity=24.113475177305, Blast_Score=134, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24647193, Length=724, Percent_Identity=23.4806629834254, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24647201, Length=697, Percent_Identity=23.2424677187948, Blast_Score=116, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24647195, Length=751, Percent_Identity=24.3675099866844, Blast_Score=114, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24647197, Length=766, Percent_Identity=24.0208877284595, Blast_Score=106, Evalue=7e-23,
Organism=Drosophila melanogaster, GI17737937, Length=699, Percent_Identity=23.175965665236, Blast_Score=102, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 78165; Mature: 78165

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFETPATTNPIDQQKVVGKPTDRIDGRFKVTGTAPYAYERHDVAPNQAYGYVLGAGIAK
CCCCCCCCCCCCCCHHHCCCCCHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCC
GRIRSMDLSRAKAAPGVIAIVSTLDMDRLDLGRMNTASLFGGPDIQHYHQAIALVVAETF
CCEECCCCHHHHCCCCEEEEEECCCCCHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH
EQARAAASLIDVDYQRQEGRFDLGAAAGSAPPVGGDSGEGSGAKPVNGIGDFNGAFAAAP
HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
VKLDAIYTTPDESHAMMEPHASIAAWNGDRLTLWTSNQMINWGKGSIAKILGIRPENVRL
EEEEEEEECCCCCCCEECCCCCEEEECCCEEEEEECCCEEECCCCCHHHHHCCCCCCEEE
DSPYIGGGFGGKLFIRADAVLAALGARAAQRPVKVTLPRPLVINNTTHRPATIQRVRIGA
CCCEECCCCCCEEEEEHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCEEEEEEECC
TPDGKITAIAHESTSGNLPGGRPETAVDQTKLLYAGANRLTAMKLAELDLPEGNAMRAPG
CCCCCEEEEEECCCCCCCCCCCCCCHHCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCC
EAPGMMALEIAMDEMAEKLGLDPVEFRVRNDTQVDPQNPERPFSHRNLIGCLKLGAERFG
CCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
WDQRMARPAQSRDGRWLVGLGMAAGFRNNLLQTSAARVRLGGDGIVTVETDMTDIGTGSY
CHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCE
TIIAQTAAEMMGVPIERVVVKLGDSDFPASAGSGGQWGGNNSTAGVYAACIKLRDAVAAR
EEEEEHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGFNSSELVFADGEVRAGNRSAPLARAAADGELVAEDAIEYGDLAKTHQQSTFAAHFVEV
HCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
AVDAATAEIRVRRMLAVCAAGRILNPKSARSQVIGAMTMGVGAALMEELAVDKRYGLFVN
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
HDLASYEVPVHADIPHQEVIFLDESDPMSSPMKAKGVAELGICGVGAAVANAVYNATGVR
CCCCCEECEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCEE
VRNYPITLDKLIGSLPETA
EECCCEEHHHHHCCCCCCC
>Mature Secondary Structure
MKFETPATTNPIDQQKVVGKPTDRIDGRFKVTGTAPYAYERHDVAPNQAYGYVLGAGIAK
CCCCCCCCCCCCCCHHHCCCCCHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCC
GRIRSMDLSRAKAAPGVIAIVSTLDMDRLDLGRMNTASLFGGPDIQHYHQAIALVVAETF
CCEECCCCHHHHCCCCEEEEEECCCCCHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH
EQARAAASLIDVDYQRQEGRFDLGAAAGSAPPVGGDSGEGSGAKPVNGIGDFNGAFAAAP
HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
VKLDAIYTTPDESHAMMEPHASIAAWNGDRLTLWTSNQMINWGKGSIAKILGIRPENVRL
EEEEEEEECCCCCCCEECCCCCEEEECCCEEEEEECCCEEECCCCCHHHHHCCCCCCEEE
DSPYIGGGFGGKLFIRADAVLAALGARAAQRPVKVTLPRPLVINNTTHRPATIQRVRIGA
CCCEECCCCCCEEEEEHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCEEEEEEECC
TPDGKITAIAHESTSGNLPGGRPETAVDQTKLLYAGANRLTAMKLAELDLPEGNAMRAPG
CCCCCEEEEEECCCCCCCCCCCCCCHHCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCC
EAPGMMALEIAMDEMAEKLGLDPVEFRVRNDTQVDPQNPERPFSHRNLIGCLKLGAERFG
CCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
WDQRMARPAQSRDGRWLVGLGMAAGFRNNLLQTSAARVRLGGDGIVTVETDMTDIGTGSY
CHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCE
TIIAQTAAEMMGVPIERVVVKLGDSDFPASAGSGGQWGGNNSTAGVYAACIKLRDAVAAR
EEEEEHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGFNSSELVFADGEVRAGNRSAPLARAAADGELVAEDAIEYGDLAKTHQQSTFAAHFVEV
HCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
AVDAATAEIRVRRMLAVCAAGRILNPKSARSQVIGAMTMGVGAALMEELAVDKRYGLFVN
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
HDLASYEVPVHADIPHQEVIFLDESDPMSSPMKAKGVAELGICGVGAAVANAVYNATGVR
CCCCCEECEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCEE
VRNYPITLDKLIGSLPETA
EECCCEEHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]