| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339871
Identifier: 146339871
GI number: 146339871
Start: 3073352
End: 3075037
Strand: Direct
Name: 146339871
Synonym: BRADO2873
Alternate gene names: NA
Gene position: 3073352-3075037 (Clockwise)
Preceding gene: 146339870
Following gene: 146339874
Centisome position: 41.22
GC content: 66.25
Gene sequence:
>1686_bases ATGACCCGAACCGGGACGTTGCTTTTGGCCGGCGTGAGCCTCGCTTGCGTGGCGGCGATCGGATCTGCGCGGGCCGAGGA CGTGGGCTGCAGCAAGGTGACGGCCGAAGCGCTGAAGGTCCCGGCGCTGACCCTGACCGGATCGAAGCTGCAGGAGGCGG CCGACGGCTTGCCGCGTCACTGCATTCTTTCCGGCAAGGTCAATGAGCGGACCGGTCTCGACGGCCACACCTATGCGATC CAGTTCGAGATCCGCCTGCCGGAGACCTGGAACGGCCGCTTCCTGCACCAGGTGAACGGCGGCAATGACGGCGTGGTGGT GCCCGCGCTCGGCGACAAGGCGGATGGCCTGGTCAGCGGCGGCACGACCCCGCTCGCCCGCGGCTTCGCGGTGTTGTCGT CGGACAGCGGTCATTCGGGCAACGACCCCGCCAACAAGCCGCGCGGGCTGGCTTCCGGCTCGGCATTCGGCCTCGATCCG CAGGCGCGGCGCGATTACGGCTATTCGGCCGACATCACGTTGGCGCCGATCGCCAAGGCGATCATTTCCGAACATTACGG CAAGAAGCCCGATTATTCCTACATCGCCGGCTGCTCCAATGGCGGTCGCCACACCATGGTCGCGGCCGAGCGCATGCCCG AGCAGTATGACGGCTTCCTGGTCGGCAATCCCGGCTTCAATCTGCCGCGCGCCGCCGTGCAGCATGCCTGGGACGTGCAG GCGCTAACCAAGGCGGATGCCGACATCCGCAAGTCGATCACGCGCGAGGATGCCAAGCTGATCTCCGCCAAGATCACCGA GGTCTGCGACGGGCTCGACGGCGCCAAGGACGGGCTGACGGCAAACCTCAAGGCCTGCCAGAAGGCGTTCAGCTTCGACA GCCTGCGCTGCGCCGCCGGCAGCACCGAGGCCTGTCTGCCGGCCGCCAAGGTCGATGCCCTGAAGAAGGTGTTCGCCGGA CCGCAGAATTCCAAGGGCGAGCAGCTCTATTCGGACTGGCCGGTCGACGGCGGCGTCGGCACCGGCAACTGGCGGGCCTG GAAGGTCGAAAGCCCGGTGGCGCCCTGGAACAACCTCCCGATCATCGCCACCATGGGCGGCGCGTCGCTGAACTACATCT TCTCGACCCCACCGGTGGAGATCGAAGGCTCGCCCGACAAGCTGGTCGAGAAGCTGCAGACGTACGACTTCGACAAGGAC GCGCCGAAGATCTACGCCAAAGAGGGCCCGTTCACGGAGTCCGCGATGGACTTCATGACGCCGCCTGCGGTCGACAACCC GACCTTGCCGGCATTCCAGAACGGCGCCCGCAAGATGCTGATCTATCACGGCCAGGCCGATCCGGTGTTCTCCATCAACG ACTCCATCCGCTGGTACGAGAAGCTCAACGCCAACGTGCAGGGCAAGGTCGATACGTTTGCGCGGCTGTTCGCCTTGCCC GGCGAGACCCATTGCGGCGGCGGCGTCACCTTGGAGAAGTTCGATGCGCTGGGTGCGCTGATGGACTGGGTCGAGAAGGG CAAGGCGCCGGAGGCGATCACGGCCTCCGTCAATGCGGCCAACAAGGAGGTACCGTCGGGCTGGAGCGCGCAGCGGACGC GGCCGCTGTGCCCGTGGCCGAAGTTTGCCAAATATGTCAGCGGCGACGTCGAGCAGGCATCCTCCTTCACCTGCACCGCG GAGTAG
Upstream 100 bases:
>100_bases ATCGTTCACGTTGCTGCCGGCTGTGCGGCGTCGGCGATTTACATTGCCGGATCTCCACGCTTAACTGCGCGCCAATCAAC AGGGTATCAGGAGGAAATGC
Downstream 100 bases:
>100_bases CGGCCTACACTTGCGGCGAGACGAGGTTCTCGATCCGGACCTTGTCGCGCTCCTCGATGATCTCGGCGATCCATTGCCGG TGGCAATGGGCGTGGTCGCG
Product: putative feruloyl esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MTRTGTLLLAGVSLACVAAIGSARAEDVGCSKVTAEALKVPALTLTGSKLQEAADGLPRHCILSGKVNERTGLDGHTYAI QFEIRLPETWNGRFLHQVNGGNDGVVVPALGDKADGLVSGGTTPLARGFAVLSSDSGHSGNDPANKPRGLASGSAFGLDP QARRDYGYSADITLAPIAKAIISEHYGKKPDYSYIAGCSNGGRHTMVAAERMPEQYDGFLVGNPGFNLPRAAVQHAWDVQ ALTKADADIRKSITREDAKLISAKITEVCDGLDGAKDGLTANLKACQKAFSFDSLRCAAGSTEACLPAAKVDALKKVFAG PQNSKGEQLYSDWPVDGGVGTGNWRAWKVESPVAPWNNLPIIATMGGASLNYIFSTPPVEIEGSPDKLVEKLQTYDFDKD APKIYAKEGPFTESAMDFMTPPAVDNPTLPAFQNGARKMLIYHGQADPVFSINDSIRWYEKLNANVQGKVDTFARLFALP GETHCGGGVTLEKFDALGALMDWVEKGKAPEAITASVNAANKEVPSGWSAQRTRPLCPWPKFAKYVSGDVEQASSFTCTA E
Sequences:
>Translated_561_residues MTRTGTLLLAGVSLACVAAIGSARAEDVGCSKVTAEALKVPALTLTGSKLQEAADGLPRHCILSGKVNERTGLDGHTYAI QFEIRLPETWNGRFLHQVNGGNDGVVVPALGDKADGLVSGGTTPLARGFAVLSSDSGHSGNDPANKPRGLASGSAFGLDP QARRDYGYSADITLAPIAKAIISEHYGKKPDYSYIAGCSNGGRHTMVAAERMPEQYDGFLVGNPGFNLPRAAVQHAWDVQ ALTKADADIRKSITREDAKLISAKITEVCDGLDGAKDGLTANLKACQKAFSFDSLRCAAGSTEACLPAAKVDALKKVFAG PQNSKGEQLYSDWPVDGGVGTGNWRAWKVESPVAPWNNLPIIATMGGASLNYIFSTPPVEIEGSPDKLVEKLQTYDFDKD APKIYAKEGPFTESAMDFMTPPAVDNPTLPAFQNGARKMLIYHGQADPVFSINDSIRWYEKLNANVQGKVDTFARLFALP GETHCGGGVTLEKFDALGALMDWVEKGKAPEAITASVNAANKEVPSGWSAQRTRPLCPWPKFAKYVSGDVEQASSFTCTA E >Mature_560_residues TRTGTLLLAGVSLACVAAIGSARAEDVGCSKVTAEALKVPALTLTGSKLQEAADGLPRHCILSGKVNERTGLDGHTYAIQ FEIRLPETWNGRFLHQVNGGNDGVVVPALGDKADGLVSGGTTPLARGFAVLSSDSGHSGNDPANKPRGLASGSAFGLDPQ ARRDYGYSADITLAPIAKAIISEHYGKKPDYSYIAGCSNGGRHTMVAAERMPEQYDGFLVGNPGFNLPRAAVQHAWDVQA LTKADADIRKSITREDAKLISAKITEVCDGLDGAKDGLTANLKACQKAFSFDSLRCAAGSTEACLPAAKVDALKKVFAGP QNSKGEQLYSDWPVDGGVGTGNWRAWKVESPVAPWNNLPIIATMGGASLNYIFSTPPVEIEGSPDKLVEKLQTYDFDKDA PKIYAKEGPFTESAMDFMTPPAVDNPTLPAFQNGARKMLIYHGQADPVFSINDSIRWYEKLNANVQGKVDTFARLFALPG ETHCGGGVTLEKFDALGALMDWVEKGKAPEAITASVNAANKEVPSGWSAQRTRPLCPWPKFAKYVSGDVEQASSFTCTAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tannase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011118 [H]
Pfam domain/function: PF07519 Tannase [H]
EC number: NA
Molecular weight: Translated: 59588; Mature: 59456
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTGTLLLAGVSLACVAAIGSARAEDVGCSKVTAEALKVPALTLTGSKLQEAADGLPRH CCCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCHHHHHHHCCCCCE CILSGKVNERTGLDGHTYAIQFEIRLPETWNGRFLHQVNGGNDGVVVPALGDKADGLVSG EEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCC GTTPLARGFAVLSSDSGHSGNDPANKPRGLASGSAFGLDPQARRDYGYSADITLAPIAKA CCCHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEHHHHHHH IISEHYGKKPDYSYIAGCSNGGRHTMVAAERMPEQYDGFLVGNPGFNLPRAAVQHAWDVQ HHHHHCCCCCCCCEEEECCCCCCEEEEEHHHCCHHHCCEEEECCCCCCCHHHHHHHHHHH ALTKADADIRKSITREDAKLISAKITEVCDGLDGAKDGLTANLKACQKAFSFDSLRCAAG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEECCC STEACLPAAKVDALKKVFAGPQNSKGEQLYSDWPVDGGVGTGNWRAWKVESPVAPWNNLP CCHHHCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC IIATMGGASLNYIFSTPPVEIEGSPDKLVEKLQTYDFDKDAPKIYAKEGPFTESAMDFMT EEEEECCCEEEEEECCCCEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHCC PPAVDNPTLPAFQNGARKMLIYHGQADPVFSINDSIRWYEKLNANVQGKVDTFARLFALP CCCCCCCCCCHHHCCCEEEEEEECCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHCC GETHCGGGVTLEKFDALGALMDWVEKGKAPEAITASVNAANKEVPSGWSAQRTRPLCPWP CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH KFAKYVSGDVEQASSFTCTAE HHHHHHCCCHHHCCCEEEECC >Mature Secondary Structure TRTGTLLLAGVSLACVAAIGSARAEDVGCSKVTAEALKVPALTLTGSKLQEAADGLPRH CCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCHHHHHHHCCCCCE CILSGKVNERTGLDGHTYAIQFEIRLPETWNGRFLHQVNGGNDGVVVPALGDKADGLVSG EEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCC GTTPLARGFAVLSSDSGHSGNDPANKPRGLASGSAFGLDPQARRDYGYSADITLAPIAKA CCCHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEHHHHHHH IISEHYGKKPDYSYIAGCSNGGRHTMVAAERMPEQYDGFLVGNPGFNLPRAAVQHAWDVQ HHHHHCCCCCCCCEEEECCCCCCEEEEEHHHCCHHHCCEEEECCCCCCCHHHHHHHHHHH ALTKADADIRKSITREDAKLISAKITEVCDGLDGAKDGLTANLKACQKAFSFDSLRCAAG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEECCC STEACLPAAKVDALKKVFAGPQNSKGEQLYSDWPVDGGVGTGNWRAWKVESPVAPWNNLP CCHHHCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC IIATMGGASLNYIFSTPPVEIEGSPDKLVEKLQTYDFDKDAPKIYAKEGPFTESAMDFMT EEEEECCCEEEEEECCCCEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHCC PPAVDNPTLPAFQNGARKMLIYHGQADPVFSINDSIRWYEKLNANVQGKVDTFARLFALP CCCCCCCCCCHHHCCCEEEEEEECCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHCC GETHCGGGVTLEKFDALGALMDWVEKGKAPEAITASVNAANKEVPSGWSAQRTRPLCPWP CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH KFAKYVSGDVEQASSFTCTAE HHHHHHCCCHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]