| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339843
Identifier: 146339843
GI number: 146339843
Start: 3045605
End: 3046603
Strand: Reverse
Name: 146339843
Synonym: BRADO2844
Alternate gene names: NA
Gene position: 3046603-3045605 (Counterclockwise)
Preceding gene: 146339844
Following gene: 146339841
Centisome position: 40.86
GC content: 70.47
Gene sequence:
>999_bases GTGCAGAATCTCCTGACCGACATTCCCGGCGTCCGCGTCGGCCATGCCCATGATGCGGCGCTCGCCTCCGGCGTGACGGC GATCCTGTTCGATCAGCCGGCGGTGGCCGCGATCGACATTCGCGGCGGCGGGCCCGGGGTGCGCGAGGATGCGCTGCTTG ATCCCGTCAACACAGTCGAGCGGGTCGACGGCATCGCGCTGTCGGGCGGTTCGGCGTTCGGCTTGGAGGCCGCCAGCGGC ATCCAGGCGTGGCTCGCCGAACAGGGCCGCGGTTTCGCCGTACGCGACGCGTTAATTCCCATTGTGCCGGGCGCGATCGT GTTCGACCTGCTCAACGGCGGCAACAAGCAATGGGGCCGCTACGCGCCGTACCGCGAGCTCGGCTATGCGGCGGCGGCCG CCGCCACGACGAGCTTTGCGCTCGGCAGCGTTGGCGCGGGCCTCGGCGCAACAACGGCCAATCTGCAGGGCGGGCTCGGC TCGGCGTCGGCTGTCACGACAGGCGGCATCAAGGTCGCGGCGATCGCGGTGGTGAATGCGGTCGGCAGCGTGACGGTCGG CGATGGTCCCTGGTTCTGGGCGGCGCCCTACGAAGCCGACGGCGAATTCGGCGGCCGCGGCCTGCCCGCGCGCTTCACGC CGGACATGCTGGCGATGCGCATCAAAGGCGGCCCTGCCCCCTCGGACTCCGAGAACACGACGATTGCGCTGGTGGTGACC GATGCCATCCTCACCAAGGCGCAGGCCAAGCGGCTCGCGATGATGGCGCAGACCGGCATGGCACGCGCGATCTATCCGGT GCACCTGCCGCTCGACGGCGACATCGTGTTTGCGGCCGCGACCTGCGCGAGGCCCATCGAGCCTCTGGTCGAGCTCAGCG AGCTTGGCATGCTCGCCGCGAACGTGCTGGCGCGGGCGATTGCGCGCGGCGTGTATCACGCGAGGCCACTGCCGTTTGCC GGCGCTCTGCCGTCCTGGCAGGACCGCTTCGGCGGCTGA
Upstream 100 bases:
>100_bases TCGCTGCGCTCATCCGGGCTACGGTGACGCGCCGTGCTGCATTGAGCCGGGGCATCGGCCGGGCTATTCATCGACCATCA CCACCAGCACCGAGACCGAC
Downstream 100 bases:
>100_bases GCGGCTTACACGCTCACCGCGGTCGTCGACGACGTGGCGCTCGACAGCTGCTGCGACTGCCGCTGGATCAGCTTCTCGAT CAGATTGTACGACGACGTCG
Product: putative L-aminopeptidase/D-esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MQNLLTDIPGVRVGHAHDAALASGVTAILFDQPAVAAIDIRGGGPGVREDALLDPVNTVERVDGIALSGGSAFGLEAASG IQAWLAEQGRGFAVRDALIPIVPGAIVFDLLNGGNKQWGRYAPYRELGYAAAAAATTSFALGSVGAGLGATTANLQGGLG SASAVTTGGIKVAAIAVVNAVGSVTVGDGPWFWAAPYEADGEFGGRGLPARFTPDMLAMRIKGGPAPSDSENTTIALVVT DAILTKAQAKRLAMMAQTGMARAIYPVHLPLDGDIVFAAATCARPIEPLVELSELGMLAANVLARAIARGVYHARPLPFA GALPSWQDRFGG
Sequences:
>Translated_332_residues MQNLLTDIPGVRVGHAHDAALASGVTAILFDQPAVAAIDIRGGGPGVREDALLDPVNTVERVDGIALSGGSAFGLEAASG IQAWLAEQGRGFAVRDALIPIVPGAIVFDLLNGGNKQWGRYAPYRELGYAAAAAATTSFALGSVGAGLGATTANLQGGLG SASAVTTGGIKVAAIAVVNAVGSVTVGDGPWFWAAPYEADGEFGGRGLPARFTPDMLAMRIKGGPAPSDSENTTIALVVT DAILTKAQAKRLAMMAQTGMARAIYPVHLPLDGDIVFAAATCARPIEPLVELSELGMLAANVLARAIARGVYHARPLPFA GALPSWQDRFGG >Mature_332_residues MQNLLTDIPGVRVGHAHDAALASGVTAILFDQPAVAAIDIRGGGPGVREDALLDPVNTVERVDGIALSGGSAFGLEAASG IQAWLAEQGRGFAVRDALIPIVPGAIVFDLLNGGNKQWGRYAPYRELGYAAAAAATTSFALGSVGAGLGATTANLQGGLG SASAVTTGGIKVAAIAVVNAVGSVTVGDGPWFWAAPYEADGEFGGRGLPARFTPDMLAMRIKGGPAPSDSENTTIALVVT DAILTKAQAKRLAMMAQTGMARAIYPVHLPLDGDIVFAAATCARPIEPLVELSELGMLAANVLARAIARGVYHARPLPFA GALPSWQDRFGG
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1167 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 33774; Mature: 33774
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNLLTDIPGVRVGHAHDAALASGVTAILFDQPAVAAIDIRGGGPGVREDALLDPVNTVE CCCHHHHCCCCEECCCHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCHHCCCHHHHH RVDGIALSGGSAFGLEAASGIQAWLAEQGRGFAVRDALIPIVPGAIVFDLLNGGNKQWGR HHCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHCCCCCCCCC YAPYRELGYAAAAAATTSFALGSVGAGLGATTANLQGGLGSASAVTTGGIKVAAIAVVNA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHH VGSVTVGDGPWFWAAPYEADGEFGGRGLPARFTPDMLAMRIKGGPAPSDSENTTIALVVT HCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCEEEEEEE DAILTKAQAKRLAMMAQTGMARAIYPVHLPLDGDIVFAAATCARPIEPLVELSELGMLAA HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHH NVLARAIARGVYHARPLPFAGALPSWQDRFGG HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MQNLLTDIPGVRVGHAHDAALASGVTAILFDQPAVAAIDIRGGGPGVREDALLDPVNTVE CCCHHHHCCCCEECCCHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCHHCCCHHHHH RVDGIALSGGSAFGLEAASGIQAWLAEQGRGFAVRDALIPIVPGAIVFDLLNGGNKQWGR HHCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHCCCCCCCCC YAPYRELGYAAAAAATTSFALGSVGAGLGATTANLQGGLGSASAVTTGGIKVAAIAVVNA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHH VGSVTVGDGPWFWAAPYEADGEFGGRGLPARFTPDMLAMRIKGGPAPSDSENTTIALVVT HCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCEEEEEEE DAILTKAQAKRLAMMAQTGMARAIYPVHLPLDGDIVFAAATCARPIEPLVELSELGMLAA HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHH NVLARAIARGVYHARPLPFAGALPSWQDRFGG HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]