| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339835
Identifier: 146339835
GI number: 146339835
Start: 3037318
End: 3038256
Strand: Direct
Name: 146339835
Synonym: BRADO2836
Alternate gene names: NA
Gene position: 3037318-3038256 (Clockwise)
Preceding gene: 146339834
Following gene: 146339836
Centisome position: 40.73
GC content: 66.03
Gene sequence:
>939_bases ATGCGCACGCTGACGATGGCATTGGCCGTGGCGATGTTGTGGCCGGCTGGACAGGCGCTGGCGTGGTGGGACGAAGGCCA CATGCAGATCGCATATTTGGCCTACAAGAAGCTGTCTCCGACCGTGCGGGACAGGGCGGACGCGCTGCTCAAGCTCAATC CCGACTACGCCAGCTGGATCGCCGGGGCGCCGCAGGGACAGGAGAAGCTCTACGCGTTCGTGCACGCAGCGACCTGGCCG GACGACATCAAGATGAAGCCGGACTATTACGACGACCAGGTGGGCGACTCCACCGCGAAGCAGCTCGTGCCGTACGGCCA CCTCAAGCACACTTATTGGCACTACAAGGACGCGCTGTTCTCGGTTGATGACACGCCGCTGCCGCGTCCCGACGCGGTGG ACGCGGTGTCCCAGCTCAAGCTGATGATCGCCAAGCTGCCGGCGAACAGCGACGCCACGGAGCCGCTGCGCTCGTACAGC CTCAGCTGGACCATCCACCTCGTCGGCGATCTGCACCAGCCGTTGCACGCCATCGCCCGCTATTCGGCCGCGTTGCCCGA CAAAGGCGGCGACCGCGGCGGCAACGAGGAGCAGGTGATCGCCGCCAACGGCGAGACGCAGAACCTGCACGCCTATTGGG ACGGCATCTTCGGCGGCTATTCCACCGTATTTGGTGCCATGTTCGACGCCGATCAGCGCGGCGGCCTGTCGACCGTGACC GCAGATCCCGGCAAGGCGCAGATCGTCGATCCCGCGACCTGGGCGCAGGAGAGCTTCGACCTGGCCAAGTCTGTCGCCTA CGCCGCGCCCATTCGCACCGACAAGCAGCCGGTCGAATTGACCCGGGAGTACGAGACCAATGCCCGCGACACCGCCCGCA AGCAGGCCGCGCTCGCTGCCGCGCGCCTCGCCAATCTGCTCGAGGTGTTGTTGCGGTAG
Upstream 100 bases:
>100_bases GTGCAGCGATGGTGAAATTGCCAATTTTTCCTGATCACGTTAGGCTCGCGATGATTTCCTGATCCCGTGTTTTTTCATAC GAACCGAGGGGGGCTTTGCG
Downstream 100 bases:
>100_bases GACCGCGCGACGTAGCGACGTAGCCCGGATGAGCGCAGCGACATCCGGGTTCACCGCTACAGCTCGTGAGACCCCGGATG TCGCTGCGCTCATCCGGGCT
Product: putative phospholipase C/P1 nuclease family protein
Products: NA
Alternate protein names: 3-Nucleotidase/Nuclease; S1/P1 Nuclease; Phospholipase C/P1 Nuclease Family Protein
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRTLTMALAVAMLWPAGQALAWWDEGHMQIAYLAYKKLSPTVRDRADALLKLNPDYASWIAGAPQGQEKLYAFVHAATWP DDIKMKPDYYDDQVGDSTAKQLVPYGHLKHTYWHYKDALFSVDDTPLPRPDAVDAVSQLKLMIAKLPANSDATEPLRSYS LSWTIHLVGDLHQPLHAIARYSAALPDKGGDRGGNEEQVIAANGETQNLHAYWDGIFGGYSTVFGAMFDADQRGGLSTVT ADPGKAQIVDPATWAQESFDLAKSVAYAAPIRTDKQPVELTREYETNARDTARKQAALAAARLANLLEVLLR
Sequences:
>Translated_312_residues MRTLTMALAVAMLWPAGQALAWWDEGHMQIAYLAYKKLSPTVRDRADALLKLNPDYASWIAGAPQGQEKLYAFVHAATWP DDIKMKPDYYDDQVGDSTAKQLVPYGHLKHTYWHYKDALFSVDDTPLPRPDAVDAVSQLKLMIAKLPANSDATEPLRSYS LSWTIHLVGDLHQPLHAIARYSAALPDKGGDRGGNEEQVIAANGETQNLHAYWDGIFGGYSTVFGAMFDADQRGGLSTVT ADPGKAQIVDPATWAQESFDLAKSVAYAAPIRTDKQPVELTREYETNARDTARKQAALAAARLANLLEVLLR >Mature_312_residues MRTLTMALAVAMLWPAGQALAWWDEGHMQIAYLAYKKLSPTVRDRADALLKLNPDYASWIAGAPQGQEKLYAFVHAATWP DDIKMKPDYYDDQVGDSTAKQLVPYGHLKHTYWHYKDALFSVDDTPLPRPDAVDAVSQLKLMIAKLPANSDATEPLRSYS LSWTIHLVGDLHQPLHAIARYSAALPDKGGDRGGNEEQVIAANGETQNLHAYWDGIFGGYSTVFGAMFDADQRGGLSTVT ADPGKAQIVDPATWAQESFDLAKSVAYAAPIRTDKQPVELTREYETNARDTARKQAALAAARLANLLEVLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34398; Mature: 34398
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLTMALAVAMLWPAGQALAWWDEGHMQIAYLAYKKLSPTVRDRADALLKLNPDYASWI CCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEHHHCCCHHHHHCCEEEEECCCHHHHH AGAPQGQEKLYAFVHAATWPDDIKMKPDYYDDQVGDSTAKQLVPYGHLKHTYWHYKDALF CCCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHEE SVDDTPLPRPDAVDAVSQLKLMIAKLPANSDATEPLRSYSLSWTIHLVGDLHQPLHAIAR ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEEEHHHHHHHHHHHH YSAALPDKGGDRGGNEEQVIAANGETQNLHAYWDGIFGGYSTVFGAMFDADQRGGLSTVT HHHCCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE ADPGKAQIVDPATWAQESFDLAKSVAYAAPIRTDKQPVELTREYETNARDTARKQAALAA CCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH ARLANLLEVLLR HHHHHHHHHHHC >Mature Secondary Structure MRTLTMALAVAMLWPAGQALAWWDEGHMQIAYLAYKKLSPTVRDRADALLKLNPDYASWI CCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEHHHCCCHHHHHCCEEEEECCCHHHHH AGAPQGQEKLYAFVHAATWPDDIKMKPDYYDDQVGDSTAKQLVPYGHLKHTYWHYKDALF CCCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHEE SVDDTPLPRPDAVDAVSQLKLMIAKLPANSDATEPLRSYSLSWTIHLVGDLHQPLHAIAR ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEEEHHHHHHHHHHHH YSAALPDKGGDRGGNEEQVIAANGETQNLHAYWDGIFGGYSTVFGAMFDADQRGGLSTVT HHHCCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE ADPGKAQIVDPATWAQESFDLAKSVAYAAPIRTDKQPVELTREYETNARDTARKQAALAA CCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH ARLANLLEVLLR HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA